Simulation of legume-cereal systems using APSIM

1998 ◽  
Vol 49 (3) ◽  
pp. 317 ◽  
Author(s):  
M. E. Probert ◽  
P. S. Carberry ◽  
R. L. McCown ◽  
J. E. Turpin

A major issue for the sustainability of cropping systems is the maintenance of soil fertility and especially the supply of nitrogen to cereal crops. Choice of appropriate management strategies, including the role of legumes, is problematic, especially where climatic variation is large. Simulation models provide the means of extrapolation from the site- and season-specific bounds of experimental data to permit scenario analyses that can explore alternative management options. This paper is a status report on the capabilities of the APSIM modelling framework to simulate legume-cereal systems. APSIM deals with water and nitrogen constraints to crop growth and is well suited to the task of modelling whole systems involving crop rotations. The components that are not yet fully developed are modules for growing the legume crops and coupling these with the module describing the dynamics of soil organic matter to obtain sensible predictions of nitrogen supply to subsequent crops. Evidence is provided that those parts of the system that can be represented by current APSIM modules are predicted satisfactorily. The closest approach to a whole system that has been simulated to date is grass or legume (Stylosanthes hamata cv. Verano) leys followed by crops of maize or sorghum grown in experiments at Katherine, NT. Predictions of the yields of the leys and the cereal crops, especially the benefit from the legume leys to a second crop, were sufficiently close to measured yields to suggest that there are good prospects for developing useful models of other systems involving legumes and cereals. A simulation scenario exploring a chickpea-wheat system demonstrates how models can be used to analyse both productivity and sustainability aspects of the system.

2020 ◽  
Author(s):  
Sara König ◽  
Ulrich Weller ◽  
Birgit Lang ◽  
Mareike Ließ ◽  
Stefanie Mayer ◽  
...  

<p>The increasing demand for food and bio-energy gives need to optimize soil productivity, while securing other soil functions such as nutrient cycling and buffer capacity, carbon storage, biological activity, and water filter and storage. Mechanistic simulation models are an essential tool to fully understand and predict the complex interactions between physical, biological and chemical processes of soil with those functions, as well as the feedbacks between these functions.</p><p>We developed a systemic soil model to simulate the impact of different management options and changing climate on the named soil functions by integrating them within a simplified system. The model operates on a 1d soil profile consisting of dynamic nodes, which may represent the different soil horizons, and integrates different processes including dynamic water distribution, soil organic matter turnover, crop growth, nitrogen cycling, and root growth.</p><p>We present the main features of our model by simulating crop growth under various climatic scenarios on different soil types including management strategies affecting the soil structure. We show the relevance of soil structure for the main soil functions and discuss different model outcome variables as possible measures for these functions.</p><p>Further, we discuss ongoing model extensions, especially regarding the integration of biological processes, and possible applications.</p>


2008 ◽  
Vol 48 (5) ◽  
pp. 621 ◽  
Author(s):  
I. R. Johnson ◽  
D. F. Chapman ◽  
V. O. Snow ◽  
R. J. Eckard ◽  
A. J. Parsons ◽  
...  

DairyMod and EcoMod, which are biophysical pasture-simulation models for Australian and New Zealand grazing systems, are described. Each model has a common underlying biophysical structure, with the main differences being in their available management options. The third model in this group is the SGS Pasture Model, which has been previously described, and these models are referred to collectively as ‘the model’. The model includes modules for pasture growth and utilisation by grazing animals, water and nutrient dynamics, animal physiology and production and a range of options for pasture management, irrigation and fertiliser application. Up to 100 independent paddocks can be defined to represent spatial variation within a notional farm. Paddocks can have different soil types, nutrient status, pasture species, fertiliser and irrigation management, but are subject to the same weather. Management options include commonly used rotational grazing management strategies and continuous grazing with fixed or variable stock numbers. A cutting regime simulates calculation of seasonal pasture growth rates. The focus of the present paper is on recent developments to the management routines and nutrient dynamics, including organic matter, inorganic nutrients, leaching and gaseous nitrogen losses, and greenhouse gases. Some model applications are presented and the role of the model in research projects is discussed.


2012 ◽  
Vol 28 (3) ◽  
pp. 220-233 ◽  
Author(s):  
Robin Gómez ◽  
Matt Liebman ◽  
David N. Sundberg ◽  
Craig A. Chase

AbstractCropping systems that include forage legumes and small grains in addition to corn (Zea mays L.) and soybean [Glycine max (L.) Merr.] can achieve similar or higher crop productivity and economic return than simpler corn–soybean rotations. We hypothesized that this rotation effect occurs regardless of the crop genotype planted and the herbicide and cultivation regime selected for weed management. To test this hypothesis, we conducted a 3-year experiment that compared three cropping systems: a conventional 2-year corn–soybean rotation, a 3-year corn–soybean–oat (Avena sativa L.)/red clover (Trifolium pretense L.) rotation, and a 4-year corn–soybean–oat/alfalfa–alfalfa (Medicago sativa L.) rotation. Within each cropping system, two contrasting sets of management strategies were used: (i) genetically engineered corn with resistance to insect pests (Ostrinia nubilalis Hübner and Diabrotica spp.) plus the broadcast application of pre-emergence herbicides, followed in the rotation by a genetically engineered soybean variety with resistance to the herbicide glyphosate plus the post-emergence broadcast application of glyphosate; and (ii) non-genetically engineered corn plus the banded application of post-emergence herbicides, followed in the rotation by a non-genetically engineered soybean and banded application of several post-emergence herbicides. The two management strategies were identified as ‘GE’ and ‘non-GE.’ Corn yield was higher in the 3-year (12.51Mgha−1) and 4-year (12.79Mgha−1) rotations than in the conventional 2-year (12.16Mgha−1) rotation, and was also 2% higher with the GE strategy than with the non-GE strategy. Soybean yield was similar among rotation systems in 2008, but higher in the 3- and 4-year systems than the 2-year rotation in 2009 and 2010. Soybean yield was similar between management strategies in 2008, but higher in the GE strategy in 2009, and similar between strategies in the 3- and 4-year rotations in 2010. Increases in rotation length were accompanied by 88–91% reductions in synthetic N fertilizer application, and the use of the non-GE rather than the GE strategy was accompanied by a 93% reduction in herbicide active ingredients applied. Averaged over the period of 2008–2010, net returns to land and labor were highest for the 3-year rotation managed with either the GE ($928ha−1yr−1) or non-GE ($936ha−1yr−1) strategies, least in the 2-year rotation managed with the non-GE strategy ($738ha−1yr−1), and intermediate in the other rotation×management combinations. Our results indicate that more diverse crop rotation systems can be as profitable as conventional corn–soybean systems and can provide farmers with greater flexibility in crop management options.


2017 ◽  
Vol 60 (6) ◽  
pp. 2097-2110 ◽  
Author(s):  
Anthony M. Whitbread ◽  
Munir P. Hoffmann ◽  
C. William Davoren ◽  
Damian Mowat ◽  
Jeffrey A. Baldock

Abstract. In low-rainfall cropping systems, understanding the water balance, and in particular the storage of soil water in the rooting zone for use by crops, is considered critical for devising risk management strategies for grain-based farming. Crop-soil modeling remains a cost-effective option for understanding the interactions between rainfall, soil, and crop growth, from which management options can be derived. The objective of this study was to assess the error in the prediction of soil water content at key decision points in the season against continuous, multi-layer soil water measurements made with frequency domain reflectometry (FDR) probes in long-term experiments in the Mallee region of South Australia and New South Wales. Field estimates of the crop lower limit or drained upper limit were found to be more reliable than laboratory-based estimates, despite the fact that plant-available water capacity (PAWC) did not substantially differ between the methods. Using the Agricultural Production Systems sIMulator (APSIM) to simulate plant-available water over three-year rotations, predicted soil water was within 7 mm (PAWC 64 to 99 mm) of the measured data across all sowing events and rotations. Simulated (n = 46) wheat grain production resulted in a root mean square error (RMSE) of 492 kg ha-1, which is only marginally smaller than that of other field studies that derived soil water limits with less detailed methods. This study shows that using field-derived data of soil water limits and soil-specific settings for parameterization of other properties that determine soil evaporation and water redistribution enables APSIM to be widely applied for managing climate risk in low-rainfall environments. Keywords: APSIM, Climate risk management, Crop models, Decision support, Soil moisture.


Author(s):  
Amy Kathleen Conley ◽  
Matthew D. Schlesinger ◽  
James G. Daley ◽  
Lisa K. Holst ◽  
Timothy G. Howard

Habitat loss, acid precipitation, and nonnative species have drastically reduced the number of Adirondack waterbodies occupied by round whitefish (Prosopium cylindraceum). The goal of this study was to 1) increase the probability of reintroduction success by modeling the suitability of ponds for reintroduction and 2) better understand the effects of different rates of pond reclamation. We created a species distribution model that identified 70 waterbodies that were physically similar to occupied ponds. The most influential variables for describing round whitefish habitat included trophic, temperature, and alkalinity classes; waterbody maximum depth; maximum air temperature; and surrounding soil texture and impervious surface. Next, we simulated population dynamics under a variety of treatment scenarios and compared the probability of complete extirpation using a modified Markov model. Under almost all management strategies, and under pressure from nonnative competitors like that observed in the past 30 years, the number of occupied ponds will decline over the next 100 years. However, restoring one pond every 3 years would result in a 99% chance of round whitefish persistence after 100 years.


PLoS ONE ◽  
2020 ◽  
Vol 15 (12) ◽  
pp. e0244059
Author(s):  
Safdar Ali ◽  
Fakhar Din Khan ◽  
Rehmat Ullah ◽  
Rahmat Ullah Shah ◽  
Saud Alamri ◽  
...  

Numerous cropping systems of the world are experiencing the emergence of new weed species in response to conservation agriculture. Conyza stricta Willd. is being a newly emerging weed of barley-based cropping systems in response to conservational tillage practices. Seed germination ecology of four populations (irrigated, rainfed, abandoned and ruderal habitats) was studied in laboratory and greenhouse experiments. The presence/absence of seed dormancy was inferred first, which indicated seeds were non-dormant. Seed germination was then recorded under various photoperiods, constant and alternating day/night temperatures, and pH, salinity and osmotic potential levels. Seedling emergence was observed from various seed burial depths. Seeds of all populations proved photoblastic and required 12-hour light/dark period for germination. Seeds of all populations germinated under 5–30°C constant temperature; however, peak germination was recorded under 17.22–18.11°C. Nonetheless, the highest germination was noted under 20/15°C alternating day/night temperature. Ruderal and irrigated populations better tolerated salinity and germinated under 0–500 mM salinity. Similarly, rainfed population proved more tolerant to osmotic potential than other populations. Seeds of all populations required neutral pH for the highest germination, whereas decline was noted in germination under basic and alkaline pH. Seedling emergence was retarded for seeds buried >2 cm depth and no emergence was recorded from >4 cm depth. These results add valuable information towards our understanding of seed germination ecology of C. stricta. Seed germination ability of different populations under diverse environmental conditions suspects that the species can present severe challenges in future if not managed. Deep seed burial along with effective management of the emerging seedlings seems a pragmatic option to manage the species in cultivated fields. However, immediate management strategies are needed for rest of the habitats.


PLoS ONE ◽  
2020 ◽  
Vol 15 (11) ◽  
pp. e0241845
Author(s):  
Thabiso Rafaki Petrus Mofokeng ◽  
Kwazi Celani Zwakele Ndlovu ◽  
Salem A. Beshyah ◽  
Ian L. Ross

Objective We wished to determine the prevalence, etiology, presentation, and available management strategies for primary adrenal insufficiency (PAI) in South Africa (SA), hypothesizing a prevalence greater than the described 3.1 per million. There is great inequity in healthcare allocation, as two parallel healthcare systems exist, potentially modifying PAI patients’ clinical profiles, private being better resourced than public healthcare. Methods An online survey of physicians’ experience relating to PAI. Results The physicians were managing 811 patients, equal to a prevalence of 14.2 per million. Likely causes of PAI in public/ academic vs private settings included: AIDS-related [304 (44.8%) vs 5 (3.8%); p<0.001], tuberculosis [288 (42.5%) vs 8 (6.0%); p<0.001], autoimmune disease [50 (7.4%) vs 88 (66.2%); p<0.001], malignancy [27 (4.0%) vs 7 (5.3%); p = 0.500], genetic including adrenoleukodystrophy (ALD) [5 (0.7%) vs 16 (12.0%); p<0.001], respectively. Overall, more patients presented with nausea [101 (74.3%) and vomiting 89 (65.9%), than diarrhoea 76 (58.9%); p = 0.008 and 126 (15.5%) in adrenal crisis. Features suggestive of a crisis were hypoglycaemia [40 (78.4%) vs 42 (48.8%); p = 0.001], shock [36 (67.9%) vs 31(36.9%); p<0.001], and loss of consciousness [25 (52.1%) vs 27 (32.9%); p = 0.031]. Greater unavailability of antibody testing in the public vs. the private sector [32 (66.7%) vs 30 (32.1%); p = 0.001], [serum-ACTH 25 (52.1%) vs 16 (19.5%); p<0.001] and glucocorticoids were [26 (54.2%) vs 33 (40.2%); p = 0.015]. Many patients, 389(66.7%) were not using identification, indicating that they need steroids in an emergency. Conclusion A survey of South African physicians suggests a higher prevalence than previously reported. Patients presented with typical symptoms, and 15.5% presented in adrenal crisis. Significant disparities in the availability of physicians’ expertise, diagnostic resources, and management options were noted in the public versus private settings. Greater awareness among health practitioners to timeously diagnose PAI is required to prevent a life-threatening outcome.


2013 ◽  
Vol 70 (4) ◽  
pp. 768-781 ◽  
Author(s):  
Paul Marchal ◽  
Youen Vermard

Abstract Marchal, P., and Vermard, Y. 2013. Evaluating deepwater fisheries management strategies using a mixed-fisheries and spatially explicit modelling framework. – ICES Journal of Marine Science, 70: 768–781. We have used in this study a spatially explicit bioeconomic modelling framework to evaluate management strategies, building in both data-rich and data-limited harvest control rules (HCRs), for a mix of deepwater fleets and species, on which information is variable. The main focus was on blue ling (Molva dypterygia). For that species, both data-rich and data-limited HCRs were tested, while catch per unit effort (CPUE) was used either to tune stock assessments, or to directly trigger management action. There were only limited differences between the performances of both HCRs when blue ling biomass was initialized at the current level, but blue ling recovered more quickly with the data-rich HCR when its initial biomass was severely depleted. Both types of HCR lead, on average, to a long-term recovery of both blue ling and saithe (Pollachius virens) stocks, and some increase in overall profit. However, that improvement is not sufficient to guarantee sustainable exploitation with a high probability. Blue ling CPUE did not always adequately reflect trends in biomass, which mainly resulted from fleet dynamics, possibly in combination with density-dependence. The stock dynamics of roundnose grenadier (Coryphaenoides rupestris), black scabbardfish (Aphanopus carbo) and deepwater sharks (Centrophorus squamosus and Centroscymnus coelolepis) were little affected by the type of HCR chosen to manage blue ling.


1993 ◽  
Vol 44 (3) ◽  
pp. 541 ◽  
Author(s):  
JL Black ◽  
GT Davies ◽  
JF Fleming

The net financial return of an enterprise depends on the interaction among a great many factors. Some of these factors relate to the animal, some to its diet, some to its environment, some to the prevalence of disease and some to circumstances outside the production enterprise such as the premiums paid for products of different quality, the relative price structure of feeds and products, and the availability and cost of capital, labour, breeding stock and other resources. Although there has been a great deal of research into many of these factors, the complexity of the interactions between them makes it virtually impossible for the human mind to assess accurately the consequences of alternative management strategies on either the efficiency of production or the long-term profitability of a livestock enterprise. By transforming the concepts and knowledge into mathematical equations and integrating them in computer programs using simulation modelling techniques, this vast store of information can be applied directly to improving the management of commercial animal enterprises. Models are also valuable for defining research priorities. These simulation models should, as far as possible, be based on descriptions of the mechanisms perceived to determine animal function, not on empirical relationships of correlation and association. This need for mechanistic models has major implications for the direction and nature of future research into animal function. Mechanistic models of animal performance alone are unlikely to result in the widespread application of knowledge to the animal industries. Models must be integrated with other modules that cover the major areas of an enterprise determining its profitability, as well as with programming features that make the whole Decision Support Software System easy to use and interpret by industry personnel. The animal model is likely to represent less than 20% of a commercially useful package. A major factor limiting the application of animal growth models is lack of an adequate description of the conditions within commercial enterprises. Collection of such data is difficult and frequently regarded as unattractive by scientists and funding organisations, but it is essential for effective application of existing knowledge through simulation models. Furthermore, industry must make frequent measurements of factors determining animal performance and enterprise profitability if the significance of predictions from animal models is to be evaluated fully. An example is presented illustrating how simulation models can improve the biological efficiency and profitability of a commercial animal enterprise when this information is available.


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