Application of a PCR-based approach to identify sex in Hawaiian honeycreepers (Drepanidinae)

2000 ◽  
Vol 6 (1) ◽  
pp. 14 ◽  
Author(s):  
Susan I. Jarvi ◽  
Susan I. Jarvi ◽  
Paul C. Banko ◽  
Paul C. Banko
Keyword(s):  
Endangered Species ◽  
Conservation Genetics ◽  
Reliable Method ◽  
Captive Breeding ◽  
Bird Species ◽  
Molecular Techniques ◽  
Hawaiian Honeycreepers ◽  
Breeding Programmes ◽  
Degree Of Confidence ◽  
High Degree

The application of molecular techniques to conservation genetics issues can provide important guidance criteria for management of endangered species. The results from this study establish that PCR-based approaches for sex determination developed in other bird species (Griffiths and Tiwari 1995; Griffiths et al. 1996, 1998; Ellegren 1996) can be applied with a high degree of confidence to at least four species of Hawaiian honeycreepers. This provides a rapid, reliable method with which population managers can optimize sex ratios within populations of endangered species that are subject to artificial manipulation through captive breeding programmes or geographic translocation.

scholarly journals Causes of hatching failure in endangered birds

2012 ◽  
Vol 8 (6) ◽  
pp. 964-967 ◽  
Author(s):  
N. Hemmings ◽  
M. West ◽  
T. R. Birkhead
Keyword(s):  
Endangered Species ◽  
Captive Breeding ◽  
Wild Birds ◽  
Embryonic Tissue ◽  
Embryo Mortality ◽  
Fertility Status ◽  
Breeding Programmes

About 10 per cent of birds' eggs fail to hatch, but the incidence of failure can be much higher in endangered species. Most studies fail to distinguish between infertility (due to a lack of sperm) and embryo mortality as the cause of hatching failure, yet doing so is crucial in order to understand the underlying problem. Using newly validated techniques to visualize sperm and embryonic tissue, we assessed the fertility status of unhatched eggs of five endangered species, including both wild and captive birds. All eggs were classified as ‘infertile’ when collected, but most were actually fertile with numerous sperm on the ovum. Eggs of captive birds had fewer sperm and were more likely to be infertile than those of wild birds. Our findings raise important questions regarding the management of captive breeding programmes.

Determination of the presence of Mycobacterium avium on Guam as a precursor to reintroduction of indigenous bird species

1998 ◽  
Vol 4 (3) ◽  
pp. 227
Author(s):  
Ilse Silva-Krott ◽  
M. Kelly Brock ◽  
Randall E. Junge
Keyword(s):  
Mycobacterium Avium ◽  
Captive Breeding ◽  
Bird Species ◽  
Animal Husbandry ◽  
Breeding Population ◽  
Native Forest ◽  
Captive Population ◽  
Boiga Irregularis ◽  
Bird Populations ◽  
High Degree

Eight of 11 native forest bird species on Guam were extirpated by the introduction of the Brown Tree Snake Boiga irregularis. Emergency measures necessary to rescue the Guam subspecies of Micronesian Kingfisher Halcyon cinnamomina cinnamomina from extinction involved translocation and captive breeding in American mainland zoos. Soon after the establishment of a captive breeding population, the kingfisher demonstrated a high degree of susceptibility to avian tuberculosis (ATB), a disease that proved to be a major threat to the preservation of the species. The cause of ATB is Mycobacterium avium which produces a prolonged course of infection in kingfishers and other birds. Kingfishers infected with M. avium are difficult to detect until late in the course of the disease, thereby potentially posing a risk of transmitting ATB to the Guam captive population of Guam Rails Gallirallus owstoni, if kingfishers are repatriated. M. avium is considered to be ubiquitous in nature. However, there are no reported mortalities due to ATB in any bird species on Guam. In this study, six of twenty-one cultures yielded Mycobacterium spp., two of which were further identified as M. avium. Since this study demonstrates that M. avium already exists on Guam, repatriating kingfishers to Guam poses no threat of introducing a new pathological agent to the island's ecosystem. Strict quarantine procedures along with rigorous animal husbandry protocols should minimize risks of repatriating infected kingfishers to Guam, and prevent transmission of ATB to the captive population of Guam Rails and other bird populations on Guam.

scholarly journals Genomic Characterisation of a Novel Avipoxvirus Isolated from an Endangered Yellow-Eyed Penguin (Megadyptes antipodes)

Viruses ◽  
2021 ◽  
Vol 13 (2) ◽  
pp. 194
Author(s):  
Subir Sarker ◽  
Ajani Athukorala ◽  
Timothy R. Bowden ◽  
David B. Boyle
Keyword(s):  
Endangered Species ◽  
Virus Isolate ◽  
Sequence Similarity ◽  
Phylogenetic Analyses ◽  
Bird Species ◽  
Rare And Endangered Species ◽  
Rare And Endangered ◽  
African Penguin ◽  
Emerging Viral Diseases ◽  
High Degree

Emerging viral diseases have become a significant concern due to their potential consequences for animal and environmental health. Over the past few decades, it has become clear that viruses emerging in wildlife may pose a major threat to vulnerable or endangered species. Diphtheritic stomatitis, likely to be caused by an avipoxvirus, has been recognised as a significant cause of mortality for the endangered yellow-eyed penguin (Megadyptes antipodes) in New Zealand. However, the avipoxvirus that infects yellow-eyed penguins has remained uncharacterised. Here, we report the complete genome of a novel avipoxvirus, penguinpox virus 2 (PEPV2), which was derived from a virus isolate obtained from a skin lesion of a yellow-eyed penguin. The PEPV2 genome is 349.8 kbp in length and contains 327 predicted genes; five of these genes were found to be unique, while a further two genes were absent compared to shearwaterpox virus 2 (SWPV2). In comparison with penguinpox virus (PEPV) isolated from an African penguin, there was a lack of conservation within the central region of the genome. Subsequent phylogenetic analyses of the PEPV2 genome positioned it within a distinct subclade comprising the recently isolated avipoxvirus genome sequences from shearwater, canary, and magpie bird species, and demonstrated a high degree of sequence similarity with SWPV2 (96.27%). This is the first reported genome sequence of PEPV2 from a yellow-eyed penguin and will help to track the evolution of avipoxvirus infections in this rare and endangered species.

scholarly journals Molecular techniques for sex identification of captive birds

2019 ◽  
Vol 12 (9) ◽  
pp. 1506-1513 ◽  
Author(s):  
Medania Purwaningrum ◽  
Herjuno Ari Nugroho ◽  
Machmud Asvan ◽  
Karyanti Karyanti ◽  
Bertha Alviyanto ◽  
...  
Keyword(s):  
Captive Breeding ◽  
Bird Species ◽  
Sex Discrimination ◽  
Sex Identification ◽  
Molecular Techniques ◽  
Chain Reaction ◽  
Breeding Programs ◽  
Non Invasive ◽  
Polymerase Chain ◽  
Conservation Breeding

Background and Aim: Many avian species are considered sexually monomorphic. In monomorphic bird species, especially in young birds, sex is difficult to identify based on an analysis of their external morphology. Accurate sex identification is essential for avian captive breeding and evolutionary studies. Methods with varying degrees of invasiveness such as vent sexing, laparoscopic surgery, steroid sexing, and chromosome inspection (karyotyping) are used for sex identification in monomorphic birds. This study aimed to assess the utility of a non-invasive molecular marker for gender identification in a variety of captive monomorphic birds, as a strategy for conservation. Materials and Methods: DNA was isolated from feather samples from 52 individuals representing 16 species of 11 families indigenous to both Indonesia and elsewhere. We amplified the chromodomain helicase DNA-binding (CHD) gene using polymerase chain reaction with MP, NP, and PF primers to amplify introns with lengths that differ between the CHD-W and the CHD-Z genes, allowing sex discrimination because the W chromosome is exclusively present in females. Results: Molecular bird sexing confirmed 33 females and 19 males with 100% accuracy. We used sequencing followed by alignment on one protected bird species (Probosciger aterrimus). Conclusion: Sex identification may be accomplished noninvasively in birds, because males only have Z sex chromosomes, whereas females have both Z and W chromosomes. Consequently, the presence of a W-unique DNA sequence identifies an individual as female. Sexing of birds is vital for scientific research, and to increase the success rate of conservation breeding programs.

scholarly journals Effect of captivity on morphology: negligible changes in external morphology mask significant changes in internal morphology

2018 ◽  
Vol 5 (5) ◽  
pp. 172470 ◽  
Author(s):  
Stephanie K. Courtney Jones ◽  
Adam J. Munn ◽  
Phillip G. Byrne
Keyword(s):  
Sexual Dimorphism ◽  
Captive Breeding ◽  
Morphological Changes ◽  
External Morphology ◽  
Wild Animals ◽  
Internal Morphology ◽  
In Captivity ◽  
Two Generations ◽  
Breeding Programmes ◽  
Source Populations

Captive breeding programmes are increasingly relied upon for threatened species management. Changes in morphology can occur in captivity, often with unknown consequences for reintroductions. Few studies have examined the morphological changes that occur in captive animals compared with wild animals. Further, the effect of multiple generations being maintained in captivity, and the potential effects of captivity on sexual dimorphism remain poorly understood. We compared external and internal morphology of captive and wild animals using house mouse ( Mus musculus ) as a model species. In addition, we looked at morphology across two captive generations, and compared morphology between sexes. We found no statistically significant differences in external morphology, but after one generation in captivity there was evidence for a shift in the internal morphology of captive-reared mice; captive-reared mice (two generations bred) had lighter combined kidney and spleen masses compared with wild-caught mice. Sexual dimorphism was maintained in captivity. Our findings demonstrate that captive breeding can alter internal morphology. Given that these morphological changes may impact organismal functioning and viability following release, further investigation is warranted. If the morphological change is shown to be maladaptive, these changes would have significant implications for captive-source populations that are used for reintroduction, including reduced survivorship.

scholarly journals Testing of self-(in)compatibility in apricot cultivars from European breeding programmes

2013 ◽  
Vol 40 (No. 2) ◽  
pp. 65-71 ◽  
Author(s):  
D. Milatović ◽  
D. Nikolić ◽  
B. Krška
Keyword(s):  
Fluorescence Microscopy ◽  
Pollen Tube ◽  
Pollen Tube Growth ◽  
Reliable Method ◽  
Pollen Tubes ◽  
Tube Growth ◽  
Self Incompatibility ◽  
Breeding Programmes

Self-(in)compatibility was tested in 40 new apricot cultivars from European breeding programmes. Pollen-tube growth in pistils from laboratory pollinations was analysed using the fluorescence microscopy. Cultivars were considered self-compatible if at least one pollen tube reached the ovary in the majority of pistils. Cultivars were considered self- incompatible if the growth of pollen tubes in the style stopped along with formation of characteristic swellings. Of the examined cultivars, 18 were self-compatible and 22 were self-incompatible. Fluorescence microscopy provides a relatively rapid and reliable method to determine self-incompatibility in apricot cultivars.      

scholarly journals How many bird extinctions have we prevented?

Oryx ◽  
2006 ◽  
Vol 40 (3) ◽  
pp. 266-278 ◽  
Author(s):  
Stuart H.M. Butchart ◽  
Alison J. Stattersfield ◽  
Nigel J. Collar
Keyword(s):  
Invasive Species ◽  
Captive Breeding ◽  
Extinction Risk ◽  
Bird Species ◽  
Iucn Red List ◽  
Additional Species ◽  
Conservation Actions ◽  
Declining Populations ◽  
Population Sizes ◽  
Principal Actions

Considerable resources and efforts have been directed at biodiversity conservation in recent years, but measures of the success of conservation programmes have been limited. Based on information on population sizes, trends, threatening processes and the nature and intensity of conservation actions implemented during 1994–2004, we assessed that 16 bird species would have probably become extinct during this period if conservation programmes for them had not been undertaken. The mean minimum population size of these 16 species increased from 34 to 147 breeding individuals during 1994–2004. In 1994, 63% of them had declining populations but by 2004, 81% were increasing. Most of these species (63%) are found on islands. The principal threats that led to their decline were habitat loss and degradation (88%), invasive species (50%) and exploitation (38%), a pattern similar to that for other threatened species, but with exploitation and invasive species being relatively more important. The principal actions carried out were habitat protection and management (75% of species), control of invasive species (50%), and captive breeding and release (33%). The 16 species represent only 8.9% of those currently classified as Critically Endangered, and 1.3% of those threatened with extinction. Many of these additional species slipped closer to extinction during 1994–2004, including 164 that deteriorated in status sufficiently to be uplisted to higher categories of extinction risk on the IUCN Red List (IUCN, 2006). Efforts need to be considerably scaled up to prevent many more extinctions in the coming decades. The knowledge and tools to achieve this are available, but we need to mobilize the resources and political will to apply them.

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