Diversity of putative ericoid mycorrhizal fungi increases with soil age and progressive phosphorus limitation across a 4.1 million-year chronosequence

2021 ◽  
Author(s):  
Devin R Leopold ◽  
Kabir G Peay ◽  
Peter M Vitousek ◽  
Tadashi Fukami
Keyword(s):  
Nutrient Limitation ◽  
Mycorrhizal Fungi ◽  
Fungal Diversity ◽  
Species Turnover ◽  
Phosphorus Limitation ◽  
Fungal Species ◽  
Direct Role ◽  
Ericoid Mycorrhizal Fungi ◽  
Composition And Structure ◽  
Soil Age

Abstract Ericaceous plants rely on ericoid mycorrhizal fungi for nutrient acquisition. However, the factors that affect the composition and structure of fungal communities associated with the roots of ericaceous plants remain largely unknown. Here, we use a 4.1-myr soil chronosequence in Hawaii to test the hypothesis that changes in nutrient availability with soil age determine the diversity and species composition of fungi associated with ericoid roots. We sampled roots of a native Hawaiian plant, Vaccinium calycinum, and used DNA metabarcoding to quantify changes in fungal diversity and community composition. We also used a fertilization experiment at the youngest and oldest sites to assess the importance of nutrient limitation. We found an increase in diversity and a clear pattern of species turnover across the chronosequence, driven largely by putative ericoid mycorrhizal fungi. Fertilization with nitrogen at the youngest site and phosphorus at the oldest site reduced fungal diversity, suggesting a direct role of nutrient limitation. Our results also reveal the presence of novel fungal species associated with Hawaiian Ericaceae and suggest a greater importance of phosphorus availability for communities of ericoid mycorrhizal fungi than is generally assumed.

scholarly journals Ericoid mycorrhizal diversity increases with soil age and progressive phosphorus limitation across a 4.1 million-year chronosequence

2020 ◽  
Author(s):  
Devin R. Leopold ◽  
Kabir G. Peay ◽  
Peter M. Vitousek ◽  
Tadashi Fukami
Keyword(s):  
Species Composition ◽  
Nutrient Limitation ◽  
Mycorrhizal Fungi ◽  
Fungal Diversity ◽  
Species Turnover ◽  
Phosphorus Limitation ◽  
Fungal Species ◽  
Direct Role ◽  
Ericoid Mycorrhizal Fungi ◽  
Soil Age

AbstractEricaceous plants rely on ericoid mycorrhizal fungi for nutrient acquisition. However, the factors that affect the composition and structure of these fungal communities remain largely unknown. Here, we use a 4.1-myr soil chronosequence in Hawaii to test the hypothesis that changes in nutrient availability with soil age determine the diversity and species composition of fungi associated with ericoid roots. We sampled roots of a native Hawaiian plant, Vaccinium calycinum, and used DNA metabarcoding to quantify changes in fungal diversity and species composition. We also used a fertilization experiment at the youngest and oldest sites to assess the importance of nutrient limitation. We found an increase in diversity and a clear pattern of species turnover across the chronosequence, driven largely by putative ericoid mycorrhizal fungi. Fertilization with nitrogen at the youngest site and phosphorus at the oldest site reduced total fungal diversity, suggesting a direct role of nutrient limitation. Our results also reveal the presence of novel fungal species associated with Hawaiian Ericaceae and suggest a greater importance of phosphorus availability for communities of ericoid mycorrhizal fungi than is generally assumed.

Diversity and abundance of ericoid mycorrhizal fungi of Gaultheria shallon on forest clearcuts

1996 ◽  
Vol 74 (3) ◽  
pp. 337-346 ◽  
Author(s):  
Guoping Xiao ◽  
Shannon M. Berch
Keyword(s):  
Mycorrhizal Fungi ◽  
Fungal Species ◽  
Forest Types ◽  
Gaultheria Shallon ◽  
Cortical Cells ◽  
Acremonium Strictum ◽  
Ericoid Mycorrhizal Fungi ◽  
Ericoid Mycorrhizae ◽  
Arbutoid Mycorrhizae ◽  
Scanning Electron

Roots of salal (Gaultheria shallon Pursh) collected from forest clearcuts were examined by light and scanning electron microscopy, and the ericoid mycorrhizal fungi were isolated and identified. Heavy colonization of typical ericoid mycorrhizae was present in and restricted to the first of the two layers of root cortical cells. Neither ectomycorrhizae nor arbutoid mycorrhizae were observed. In the field, over 85% of the roots and 90% of the cortical cells within colonized roots were colonized. One hundred and seventy-five of the 278 fungal isolates from salal roots formed ericoid mycorrhizae with salal in the laboratory, and these isolates were grouped into four species based on spore formation and cultural characteristics: Oidiodendron griseum Robak, Acremonium strictwn W. Gams, and two unidentified, nonsporulating fungal species. The association in the laboratory between A. strictum and salal was atypical in that the fungus improved the growth of salal seedlings but was slow to colonize roots and occasionally grew and even sporulated on the shoots. No differences in percent colonization or diversity of ericoid mycorrhizal fungi were found in salal growing on clearcuts from two different forest types. Keywords: Gaultheria shallon, Oidiodendron griseum, Acremonium strictum, ericoid mycorrhizal fungi.

scholarly journals Forest tree species composition and abiotic site conditions drive soil fungal communities and functional groups

2021 ◽  
Author(s):  
Likulunga Emmanuel Likulunga ◽  
Carmen Alicia Rivera P&eacuterez ◽  
Dominik Schneider ◽  
Rolf Daniel ◽  
Andrea Polle
Keyword(s):  
Species Richness ◽  
Tree Species ◽  
Mycorrhizal Fungi ◽  
Fungal Diversity ◽  
Fungal Species ◽  
Douglas Fir ◽  
Fungal Communities ◽  
Site Conditions ◽  
Saprotrophic Fungi ◽  
Tree Species Composition

Soil fungi, especially the functional guilds of saprotrophic and mycorrhizal fungi, play a central role in ecosystem processes by degrading litter, mining for mineral nutrients and linking above- and belowground nutrient fluxes. Fungal community structures are influenced by abiotic habitat filters and management decisions such as tree species selection. Yet, the implications of the enrichment of temperate forests consisting of tree species in their natural range with non-native tree species on soil fungal diversity and their functional groups are unknown. Here, we studied fungal communities in 40 plots located in two regions differing in site conditions (nutrient content and soil moisture) in forests composed of European beech, Norway spruce and Douglas-fir (non-native) and mixtures of beech with either spruce or Douglas-fir. We hypothesized that fungal community structures are driven by soil resources and tree species composition, generally resulting in higher fungal diversity in mixed than in mono-specific forests. We further hypothesized that Douglas-fir has a negative effect on ectomycorrhizal fungal species richness compared to native species, whereas saprotrophic fungal richness is unaffected. We found strong separation of fungal communities between nutrient-rich and nutrient-poor sites and taxonomic divergence between beech and conifer fungal communities and an intermediate pattern in mixed forests. Mycorrhizal species richness did not vary with forest type, but the relative abundance of mycorrhizal species was lower in Douglas-fir and in mixed beech-Douglas-fir forests than in spruce or beech-spruce mixture. Conifer forests contained higher relative abundances of saprotrophic fungi than mono-specific beech forests. Among 16 abundant fungal orders in soil, two containing saprotrophic fungi (Tremellales, Hymenochaetales) were enriched in conifer forests, regardless of site conditions and tree species mixture. The other fungal orders, including those dominated by mycorrhizal fungi (Russulales, Boletales, Atheliales, Cantharellales) showed variable patterns depending on site conditions and tree species. In conclusion, Douglas-fir mono-specific or mixed forests show no loss of fungal species richness, but a shift in functional composition towards saprotrophic fungi.

Occurrence of Vesicular-Arbuscular Mycorrhizal Fungi in Alberta, Canada

1993 ◽  
Vol 48 (11-12) ◽  
pp. 923-929 ◽  
Author(s):  
S. M. Boyetchko ◽  
J. P. Tewari
Keyword(s):  
Electron Microscopy ◽  
Scanning Electron Microscopy ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Fungal Species ◽  
Glomus Aggregatum ◽  
X Ray ◽  
Vesicular Arbuscular ◽  
Spore Walls ◽  
Scanning Electron

Abstract Three V A mycorrhizal fungal species were isolated from soils in Alberta, Canada and examined by scanning electron microscopy and energy-dispersive X-ray microanalysis. Mature spores of Glomus aggregatum developed an outer hyaline wall which contained lower levels of calcium than the middle wall. Examination of G. pansihalos spores revealed a lower level of calcium in the outer evanescent wall as compared to the ornamented wall. When spores of Entrophospora infrequens were examined, the wall of the vesicle was found to contain similar levels of calcium as the ornamented wall of the spore. The significance of the results concerning the presence of calcium in mycorrhizal spore walls is discussed, as is the occurrence of the mycorrhizal species.

scholarly journals Microbial Communities, Metabolites, Fermentation Quality and Aerobic Stability of Whole-Plant Corn Silage Collected from Family Farms in Desert Steppe of North China

Processes ◽  
2021 ◽  
Vol 9 (5) ◽  
pp. 784
Author(s):  
Chao Wang ◽  
Lin Sun ◽  
Haiwen Xu ◽  
Na Na ◽  
Guomei Yin ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Bacterial Diversity ◽  
Fungal Diversity ◽  
North China ◽  
Bacterial Species ◽  
Fungal Species ◽  
Family Farms ◽  
Aerobic Stability ◽  
Whole Plant ◽  
Lactobacillus Kefiri

Whole-plant corn silages on family farms were sampled in Erdos (S1), Baotou (S2), Ulanqab (S3), and Hohhot (S4) in North China, after 300 d of ensiling. The microbial communities, metabolites, and aerobic stability were assessed. Lactobacillusbuchneri, Acinetobacter johnsonii, and unclassified Novosphingobium were present at greater abundances than others in S2 with greater bacterial diversity and metabolites. Lactobacillus buchneri, Lactobacillus parafarraginis, Lactobacillus kefiri, and unclassified Lactobacillus accounted for 84.5%, and 88.2%, and 98.3% of bacteria in S1, S3, and S4, respectively. The aerobic stability and fungal diversity were greater in S1 and S4 with greater abundances of unclassified Kazachstania, Kazachstania bulderi, Candida xylopsoci, unclassified Cladosporium, Rhizopus microspores, and Candida glabrata than other fungi. The abundances of unclassified Kazachstania in S2 and K. bulderi in S3 were 96.2% and 93.6%, respectively. The main bacterial species in S2 were L. buchneri, A. johnsonii, and unclassified Novosphingobium; Lactobacillus sp. dominated bacterial communities in S1, S3, and S4. The main fungal species in S1 and S4 were unclassified Kazachstania, K. bulderi, C. xylopsoci, unclassified Cladosporium, R. microspores, and C. glabrata; Kazachstania sp. dominated fungal communities in S2 and S3. The high bacterial diversity aided the accumulation of metabolites, and the broad fungal diversity improved the aerobic stability.

Isolation and identification of hydroxamate siderophores of ericoid mycorrhizal fungi

BioMetals ◽  
1992 ◽  
Vol 5 (1) ◽  
pp. 51-56 ◽  
Author(s):  
Kurt Haselwandter ◽  
Barbara Dobernigg ◽  
Werner Beck ◽  
G�nther Jung ◽  
Alexander Cansier ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Isolation And Identification ◽  
Ericoid Mycorrhizal Fungi ◽  
Hydroxamate Siderophores

scholarly journals Seasonal Diversity of Arbuscular Mycorrhizal Fungi in Mangroves of Goa, India

2013 ◽  
Vol 2013 ◽  
pp. 1-7 ◽  
Author(s):  
James D’Souza ◽  
Bernard Felinov Rodrigues
Keyword(s):  
Species Richness ◽  
Mycorrhizal Fungi ◽  
Monsoon Season ◽  
Arbuscular Mycorrhizal ◽  
Fungal Spore ◽  
Fungal Species ◽  
Spore Density ◽  
Species Variation ◽  
Fungal Community Composition ◽  
Mangrove Plant

Seasonal dynamics of arbuscular mycorrhizal (AM) fungal community composition in three common mangrove plant species, namely, Acanthus ilicifolius, Excoecaria agallocha, and Rhizophora mucronata, from two sites in Goa, India, were investigated. In all three species variation in AM fungal spore density was observed. Maximum spore density and AM species richness were recorded in the premonsoon season, while minimum spore density and richness were observed during monsoon season at both sites. A total of 11 AM fungal species representing five genera were recorded. Acaulospora laevis was recorded in all seasons at both sites. Multivariate analysis revealed that season and host coaffected AM spore density and species richness with the former having greater influence than the latter.

scholarly journals Different Amplicon Targets for Sequencing-Based Studies of Fungal Diversity

2017 ◽  
Vol 83 (17) ◽  
Author(s):  
Francesca De Filippis ◽  
Manolo Laiola ◽  
Giuseppe Blaiotta ◽  
Danilo Ercolini
Keyword(s):  
Microbial Ecology ◽  
High Throughput ◽  
Biological Samples ◽  
Fungal Diversity ◽  
High Throughput Sequencing ◽  
Amplicon Sequencing ◽  
Fungal Species ◽  
Fungal Communities ◽  
Its2 Region ◽  
Mock Community

ABSTRACT Target-gene amplicon sequencing is the most exploited high-throughput sequencing application in microbial ecology. The targets are taxonomically relevant genes, with 16S rRNA being the gold standard for bacteria. As for fungi, the most commonly used target is the internal transcribed spacer (ITS). However, the uneven ITS length among species may promote preferential amplification and sequencing and incorrect estimation of their abundance. Therefore, the use of different targets is desirable. We evaluated the use of three different target amplicons for the characterization of fungal diversity. After an in silico primer evaluation, we compared three amplicons (the ITS1-ITS2 region [ITS1-2], 18S ribosomal small subunit RNA, and the D1/D2 domain of the 26S ribosomal large subunit RNA), using biological samples and a mock community of common fungal species. All three targets allowed for accurate identification of the species present. Nevertheless, high heterogeneity in ITS1-2 length was found, and this caused an overestimation of the abundance of species with a shorter ITS, while both 18S and 26S amplicons allowed for more reliable quantification. We demonstrated that ITS1-2 amplicon sequencing, although widely used, may lead to an incorrect evaluation of fungal communities, and efforts should be made to promote the use of different targets in sequencing-based microbial ecology studies. IMPORTANCE Amplicon-sequencing approaches for fungi may rely on different targets affecting the diversity and abundance of the fungal species. An increasing number of studies will address fungal diversity by high-throughput amplicon sequencing. The description of the communities must be accurate and reliable in order to draw useful insights and to address both ecological and biological questions. By analyzing a mock community and several biological samples, we demonstrate that using different amplicon targets may change the results of fungal microbiota analysis, and we highlight how a careful choice of the target is fundamental for a thorough description of the fungal communities.

scholarly journals Mycorrhizal fungi inoculation and phosphorus fertilizer on growth, essential oil production and nutrient uptake in peppermint (Mentha piperita L.)

2012 ◽  
Vol 14 (4) ◽  
pp. 692-699 ◽  
Author(s):  
M.C. Arango ◽  
M.F. Ruscitti ◽  
M.G. Ronco ◽  
J. Beltrano
Keyword(s):  
Essential Oil ◽  
Plant Growth ◽  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Glomus Intraradices ◽  
Arbuscular Mycorrhizal ◽  
Fungal Species ◽  
Mentha Piperita ◽  
Essential Oil Yield ◽  
Essential Oil Production

This study evaluated the effects of inoculation with the arbuscular mycorrhizal fungi Glomus mosseae, Glomus intraradices A4 and Glomus intraradices B1 and two phosphorus levels (10 and 40 mg kg-1) on root colonization, plant growth, nutrient uptake and essential oil content in Mentha piperita L. The experiment was carried out in a greenhouse, in 4x2 factorial arrangement, in completely randomized design. At sixty days after transplanting, the mycorrhizal plants had significantly higher fresh matter, dry matter and leaf area compared to non-mycorrhizal plants. The inoculation increased P, K and Ca levels in the shoot which were higher under 40 mg P kg-1 of soil. Plants grown with 40 mg P kg-1 soil increased the essential oil yield per plant by about 40-50% compared to those cultivated with 10 mg P kg-1, regardless of the mycorrhizal treatment. Among the studied fungal species, inoculation with G. intraradices A4 and a high level of P significantly increased plant growth and essential oil yield, compared to the other studied mycorrhizal fungal species. In conclusion, inoculation of arbuscular mycorrhizal fungi into peppermint plants is a feasible alternative to increase the essential oil production and reduce the use of fertilizers required to obtain economic production of peppermint under phosphorus-deficient soil condition.

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