scholarly journals Occurrence and Distribution of Physiological Races of Exserohilum turcicum in Ontario, Canada

Plant Disease ◽  
2019 ◽  
Vol 103 (7) ◽  
pp. 1450-1457 ◽  
Author(s):  
Krishan K. Jindal ◽  
Albert U. Tenuta ◽  
Tsegaye Woldemariam ◽  
Xiaoyang Zhu ◽  
Dave C. Hooker ◽  
...  
Keyword(s):  
Resistance Genes ◽  
Exserohilum Turcicum ◽  
Corn Hybrids ◽  
Physiological Races ◽  
The Past ◽  
Geographical Regions ◽  
Symptomatic Leaf ◽  
New Races ◽  
Corn Leaf Blight ◽  
Virulence Frequency

Northern corn leaf blight (NCLB) caused by Exserohilum turcicum is the most common and economically significant fungal leaf disease of corn in Ontario, Canada. During the past 10 years in Ontario, severity and incidence of NCLB have increased, possibly owing to the appearance of new races. Several races have been identified in various parts of the world; however, information on occurrence and distribution of races in Ontario is lacking. In the current study, 677 single conidial isolates of E. turcicum were isolated from 687 symptomatic leaf samples collected between 2012 and 2016. These isolates were evaluated for pathogenicity on six corn differential inbreds (A619, A619Ht1, A619Ht2, A619Ht3, A632Htn1, and H102Htm1) under controlled environmental conditions and then grouped into 17 physiological races (0, 1, 2, 3, M, N, 12, 1M, 1N, 3M, 13M, 12N, 13N, 1MN, 12MN, 13MN, 123MN) based on the reaction of the inbreds to infection (resistant or susceptible). Four races (0, 1M, 1N, and 1MN) were most frequent, with an isolation frequency of 13, 10, 12, and 41%, respectively. Seventy-six percent of the isolates were virulent on more than one Ht resistance gene, with 2.4% (16 isolates) virulent on all five Ht resistance genes used in this study. Further analysis of the distribution of races in four regions over the years revealed that the occurrence and distribution of the races changed with time in Ontario. Overall, the frequency of virulence of the 677 isolates screened on the differentials with resistance genes Ht1, Ht2, Ht3, Htm1, and Htn1 varied from 6 to 81% (Ht1 81%, Ht2 6%, Ht3 12%, Htm1 64%, and Htn1 64%). Virulent isolates produced fewer lesions on the Htm1 differential, and smaller lesions that were slower and having less sporulation on the Htn1 differential, compared with infection of the differentials with Ht1, Ht2, and Ht3 resistance genes. Virulence frequency also changed within the four geographical regions of Ontario, with fewer isolates virulent on all resistance genes in eastern Ontario compared with southern and western Ontario. Isolates from southern Ontario had greater virulence frequency against Ht1 and Htm1, whereas isolates from western Ontario were more frequently virulent on Ht1 and Htn1. The information generated in this study on the distribution of E. turcicum races in Ontario corn will help growers to select appropriate hybrids with required resistance genes and will assist seed companies in deploying resistance genes in corn hybrids across the province or within a particular region.

scholarly journals Assessment of physiological races of Exserohilum turcicum isolates from maize in Argentina and Brazil

2021 ◽  
Author(s):  
Barbara Ludwig Navarro ◽  
Lucia Ramos Romero ◽  
María Belén Kistner ◽  
Juliana Iglesias ◽  
Andreas von Tiedemann
Keyword(s):  
Exserohilum Turcicum ◽  
Breeding Programs ◽  
Physiological Races ◽  
Maize Leaves ◽  
Race 1 ◽  
Resistance Reaction ◽  
Qualitative Resistance ◽  
Maize Plants ◽  
Corn Leaf Blight ◽  
Resistant Genotypes

AbstractNorthern corn leaf blight (NCLB) is one of the most important diseases in maize worldwide. It is caused by the fungus Exserohilum turcicum, which exhibits a high genetic variability for virulence, and hence physiological races have been reported. Disease control is based mainly on fungicide application and host resistance. Qualitative resistance has been widely used to control NCLB through the deployment of Ht genes. Known pathogen races are designated according to their virulence to the corresponding Ht gene. Knowledge about of E. turcicum race distribution in maize-producing areas is essential to develop and exploit resistant genotypes. Maize leaves showing distinct elliptical grey-green lesions were collected from maize-producing areas of Argentina and Brazil, and 184 monosporic E. turcicum isolates were obtained. A total of 66 isolates were collected from Argentina during 2015, 2018 and 2019, while 118 isolates from Brazil were collected during 2017, 2018 and 2019. All isolates were screened on maize differential lines containing Ht1, Ht2, Ht3 and Htn1 resistance genes. In greenhouse experiments, inoculated maize plants were evaluated at 14 days after inoculation. Resistance reaction was characterized by chlorosis, and susceptibility was defined by necrosis in the absence of chlorosis. The most frequent race was 0 in both Argentina (83%) and Brazil (65%). Frequencies of race 1 (6% and 24%) and race 23N (5% and 10%) were very low in Argentina and Brazil, respectively. The high frequency of race 0 isolates provides evidence that qualitative resistance based on the tested Ht genes is not being used extensively in Argentina and Brazil to control NCLB. This information may be relevant for growers and breeding programs as the incidence of NCLB is increasing in both countries.

scholarly journals Exserohilum turcicum Race Population Distribution in the North Central United States

Plant Disease ◽  
2018 ◽  
Vol 102 (2) ◽  
pp. 292-299 ◽  
Author(s):  
Japheth D. Weems ◽  
Carl A. Bradley
Keyword(s):  
United States ◽  
Resistance Genes ◽  
Population Distribution ◽  
The United States ◽  
Population Diversity ◽  
Exserohilum Turcicum ◽  
North Central ◽  
Physiological Races ◽  
The North ◽  
Central United States

Northern leaf blight (NLB) of corn, caused by Exserohilum turcicum, is a foliar disease common across corn production regions of the world, including those in the north central United States. Previous race population distribution studies identified five physiological races present in the United States, prior to 1995. For this study, 156 E. turcicum isolates were screened on corn differential lines containing Ht1, Ht2, Ht3, Htm1, and Htn1 resistance genes. Isolates were collected from fields in Iowa, Illinois, Indiana, Minnesota, North Carolina, Ohio, and Wisconsin, which included 143 isolates collected between 2007 and 2014 and 13 isolates collected between 1979 and 1985. Twenty different physiological races were observed based on the symptom response of the differential corn lines. E. turcicum race 0, 1, and 1mn were the most prevalent races, comprising 21, 27, and 13% of the 156 isolates, respectively. Race populations were diverse within states and years. Virulence to multiple Ht resistance genes within individual isolates was observed in 47% of those tested, with 3% of the isolates conferring virulence to all Ht resistance genes. Virulence to the Ht1, Ht2, Ht3, Htm1, and Htn1 resistance genes was present in 64, 20, 18, 32, and 27% of the E. turcicum isolates, respectively. Virulence to Ht resistance genes was fairly evenly distributed across states, in isolates collected after 2008. Virulence to Ht2, Ht3, Htm1, and Htn1 decreased after 2010. Variations in race population diversity are difficult to explain without knowing the level of selection pressure present in fields, and information regarding Ht resistance gene deployment in commercial varieties is not publicly available. Although virulence was observed against all Ht resistance genes, qualitative Ht resistance genes could be used in conjunction with quantitative resistance to increase NLB control.

Physiological races and virulence dynamics of Setosphaeria turcica in Northeast China

Plant Disease ◽  
2021 ◽  
Author(s):  
Zhoujie Ma ◽  
Shidao He ◽  
Bo Liu ◽  
Suna Wang ◽  
Yufei Huang ◽  
...  
Keyword(s):  
Resistance Genes ◽  
Northeast China ◽  
Leaf Blight ◽  
Corn Production ◽  
Foliar Disease ◽  
Setosphaeria Turcica ◽  
Northern Corn Leaf Blight ◽  
Physiological Races ◽  
Corn Leaf Blight

Northern corn leaf blight (NCLB), caused by Setosphaeria turcica, is an important foliar disease in corn. Since 2005, the damage from NCLB has increased in Northeast China, probably due to the emergence of new physiological races. In this study, 883 single conidial isolates of S. turcica were obtained from 12 sites across three provinces of Northeast China between 2007 and 2017. The virulence of the isolates was evaluated in five corn lines (B37, B37Ht1, B37Ht2, B37Ht3, B37HtN). Sixteen physiological races (0, 1, 2, 3, N, 12, 13, 1N, 23, 2N, 3N, 123, 12N, 13N, 23N, and 123N) were obtained, depending on their resistance or susceptibility. Three races (0, 1, and 2) were most prevalent, with frequencies of 40.5%, 19.6%, and 11.3% in all isolates, respectively. Races varied across provinces and years. Virulence to more than one Ht resistance genes occurred in 21.5% of isolates, with 8.5% virulent to three or more genes. Overall, 41% of isolates were avirulent to all Ht genes, 36% were virulent to Ht1, 28% to Ht2, 11% to Ht3, and 16% to HtN. Isolates from Heilongjiang had a greater frequency of virulence to Ht2 and Ht3, whereas isolates from Jilin and Liaoning were more frequently virulent to Ht1 and HtN, respectively. The frequency of isolate virulence to Ht2 ranged from 8% in 2009 to a maximum of 29% in 2015, and in 2015, isolates were more virulent to Ht2 than Ht1. This study will help growers to purposefully select commercial hybrids with multiple effective Ht resistance genes, and reduce the utilization of Ht1 and Ht2 genes in the process of corn production to strengthen NCLB control.

scholarly journals Resistance Conferred by the Ht1 Gene in Sweet Corn Infected by Mixtures of Virulent and Avirulent Exserohilum turcicum

Plant Disease ◽  
2006 ◽  
Vol 90 (6) ◽  
pp. 771-776 ◽  
Author(s):  
J. K. Pataky ◽  
Tatjana Ledencan
Keyword(s):  
Sweet Corn ◽  
The United States ◽  
Exserohilum Turcicum ◽  
Corn Hybrids ◽  
General Resistance ◽  
Initial Inoculum ◽  
Field Corn ◽  
Race 1 ◽  
The 1960S ◽  
Corn Leaf Blight

The Ht1 gene conveys a chlorotic-lesion resistant reaction in corn infected by avirulent races of Exserohilum turcicum, the causal agent of northern corn leaf blight (NCLB). The widespread deployment of the Ht1 gene in field corn grown in North America since the 1960s resulted in an increased frequency of E. turcicum race 1, which is virulent against the Ht1 gene. The objective of this study was to assess the value of resistance conveyed by the Ht1 gene when initial inoculum consisted of different ratios of virulent and avirulent E. turcicum. Forty-two sweet corn hybrids with the Ht1 gene and 42 sweet corn hybrids without Ht1 were grown in five trials each in 2003 and 2004. In each trial, plants were inoculated with culture suspensions consisting of different percentages of E. turcicum race 0 and race 1, including: 100:0, 90:10, 75:25, 50:50, and 0:100. Severity of NCLB was rated visually from 0 to 100% leaf area infected when plants were about 3 to 4 weeks past the mid-silk growth stage. The Ht1 gene reduced severity of NCLB by as much as one-third when virulent isolates comprised 25% or less of the initial inoculum. Reduction in NCLB severity due to the Ht1 gene was more substantial on hybrids with susceptible backgrounds than on those with general resistance. When virulent isolates comprised 50% of the initial inoculum, NCLB severity was similar for hybrids with and without the Ht1 gene if hybrids had equivalent levels of general resistance (measured as NCLB severity from trials inoculated entirely with race 1). To accurately classify NCLB reactions of maize lines relative to their most probable performance in the United States, inoculum should consist of at least 50% E. turcicum race 1.

scholarly journals Different historical generation intervals in human populations inferred from Neanderthal fragment lengths and patterns of mutation accumulation

2021 ◽  
Author(s):  
Moisès Coll Macià ◽  
Laurits Skov ◽  
Benjamin Marco Peter ◽  
Mikkel Heide Schierup
Keyword(s):  
Fragment Length ◽  
Human Populations ◽  
Female Age ◽  
Generation Interval ◽  
The Past ◽  
Geographical Regions ◽  
Neanderthal Admixture ◽  
Rate Of Decay ◽  
Out Of Africa ◽  
Insight Into

AbstractAfter the main out-of-Africa event, humans interbred with Neanderthals leaving 1-2% of Neanderthal DNA scattered in small fragments in all non-African genomes today1,2. Here we investigate the size distribution of these fragments in non-African genomes3. We find consistent differences in fragment length distributions across Eurasia with 11% longer fragments in East Asians than in West Eurasians. By comparing extant populations and ancient samples, we show that these differences are due to a different rate of decay in length by recombination since the Neanderthal admixture. In line with this, we observe a strong correlation between the average fragment length and the accumulation of derived mutations, similar to what is expected by changing the ages at reproduction as estimated from trio studies4. Altogether, our results suggest consistent differences in the generation interval across Eurasia, by up to 20% (e.g. 25 versus 30 years), over the past 40,000 years. We use sex-specific accumulations of derived alleles to infer how these changes in generation intervals between geographical regions could have been mainly driven by shifts in either male or female age of reproduction, or both. We also find that previously reported variation in the mutational spectrum5 may be largely explained by changes to the generation interval and not by changes to the underlying mutational mechanism. We conclude that Neanderthal fragment lengths provide unique insight into differences of a key demographic parameter among human populations over the recent history.

Birch foliar responses to simulated acidic fog and Septoria betulae inoculations

2001 ◽  
Vol 31 (3) ◽  
pp. 392-400
Author(s):  
K B Kouterick ◽  
J M Skelly ◽  
S P Pennypacker ◽  
R M Cox
Keyword(s):  
Bay Of Fundy ◽  
Betula Papyrifera ◽  
Mature Trees ◽  
The Past ◽  
Foliar Symptoms ◽  
Foliar Symptom ◽  
Foliar Senescence ◽  
Symptomatic Leaf ◽  
Acidic Fog ◽  
Ph Level

The effects of simulated acidic fog and inoculation with Septoria betulae Pass. on foliar symptom development and foliar senescence of Betula papyrifera Marsh. and Betula cordifolia Regel seedlings were investigated in 1997 and 1998 under greenhouse conditions. An interactive role may exist between acidic fog events and S. betulae in causing birch foliar browning, a disease reported over the past decade to occur on mature trees growing adjacent to the Bay of Fundy, Canada. Seedlings received applications of simulated fog adjusted to pH 3.2, 4.2, and 5.6 or a no-fog treatment. Inoculation treatments at each fog pH level were accomplished through spray atomization with S. betulae conidial suspensions and by placing naturally infected birch leaves bearing pycnidia of the fungus on plastic nets suspended above seedlings in enclosed chambers. Percent symptomatic leaf area of seedlings inoculated with S. betulae was nearly double that recorded for non-inoculated seedlings. Foliar browning resembled symptoms observed on mature trees in the field. Foliar symptoms were observed on non-inoculated seedlings, with greater severities associated with seedlings exposed to the most acidic fog treatment. Leaf senescence was also greatest for spray-inoculated leaves that had been exposed to the pH 3.2 fog treatment. Pycnidial development was not influenced by the pH of the fog treatments but was greater in all fog treatments than in no-fog treatments. Although both acidic fog and S. betulae infection are able to cause symptoms independently, the data suggest that an interactive role may exist in causing birch foliar browning. However, to obtain the same severity of foliar browning as observed on natural forest-grown trees in the Bay of Fundy region, S. betulae must be present.

scholarly journals Global Burden of Stroke

2018 ◽  
Vol 38 (02) ◽  
pp. 208-211 ◽  
Author(s):  
Mira Katan ◽  
Andreas Luft
Keyword(s):  
Hemorrhagic Stroke ◽  
Middle Income ◽  
Stroke Incidence ◽  
Middle Income Countries ◽  
The Past ◽  
Disability Adjusted Life ◽  
Life Years ◽  
Incidence And Mortality ◽  
Geographical Regions ◽  
Life Years Lost

AbstractStroke is the second leading cause of death and a major cause of disability worldwide. Its incidence is increasing because the population ages. In addition, more young people are affected by stroke in low- and middle-income countries. Ischemic stroke is more frequent but hemorrhagic stroke is responsible for more deaths and disability-adjusted life-years lost. Incidence and mortality of stroke differ between countries, geographical regions, and ethnic groups. In high-income countries mainly, improvements in prevention, acute treatment, and neurorehabilitation have led to a substantial decrease in the burden of stroke over the past 30 years. This article reviews the epidemiological and clinical data concerning stroke incidence and burden around the globe.

scholarly journals Interaction between Antibiotic Resistance, Resistance Genes, and Treatment Response for Urinary Tract Infections in Primary Care

2019 ◽  
Vol 57 (9) ◽  
Author(s):  
Hanley J. Ho ◽  
Mei Xuan Tan ◽  
Mark I. Chen ◽  
Thean Yen Tan ◽  
Seok Hwee Koo ◽  
...  
Keyword(s):  
Primary Care ◽  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Urine Culture ◽  
Early Symptom ◽  
Content Type ◽  
Symptom Resolution ◽  
Factors Associated ◽  
The Past ◽  
Amoxicillin Clavulanate

ABSTRACTGiven increasing antimicrobial resistance, we aimed to determine antibiotic susceptibility and presence of resistance genes in uropathogens in primary care, factors associated with resistance to commonly prescribed antibiotics, and effect of treatment on early symptom resolution. We conducted a prospective study of primary care patients with urinary tract infection (UTI) symptoms and culture-confirmed UTI in Singapore from 2015 to 2016. Cohort characteristics and antimicrobial susceptibility of cultured isolates were analyzed. AmongEnterobacteriaceaeisolates, early symptom resolution (within 3 days) according to antibiotic prescribed and isolate susceptibility and factors associated with antibiotic resistance were evaluated. Of 695 symptomatic patients, 299 were urine culture positive; of these 299 patients, 259 (87%) were female.Escherichia coliwas the most common uropathogen (76%).Enterobacteriaceaeisolates (n = 283) were highly susceptible to amoxicillin-clavulanate (86%), nitrofurantoin (87%), and fosfomycin (98%), but >20% were resistant to ciprofloxacin and co-trimoxazole. Isolates resistant to appropriate indicator antibiotics were further tested to determine proportions positive forblaCTX-M(14/26, 54%), plasmid-mediatedampC(12/24, 50%),qnr(7/69, 10%), andfos(1/6, 17%) resistance genes. A total of 67% of patients given antibiotics with susceptible isolates reported early resolution versus 45% given antibiotics with nonsusceptible isolates (P = 0.001) and 27% not treated (P = 0.018). On multivariable analysis, Indian ethnicity and diabetes mellitus were associated with amoxicillin-clavulanate resistance. Genitourinary abnormalities, UTI in the past 12 months, and hospitalization in the past 6 months were associated with ciprofloxacin and co-trimoxazole resistance. Patients given active empirical antibiotics were most likely to report early symptom resolution, but correlation within vitrosusceptibility was imperfect. Factors associated with resistance may guide the decision to obtain initial urine culture.

scholarly journals Quantitative Trait Loci (QTL) Analysis Reveals Both Broad-Spectrum and Isolate-Specific QTL for Scab Resistance in an Apple Progeny Challenged with Eight Isolates of Venturia inaequalis

2004 ◽  
Vol 94 (4) ◽  
pp. 370-379 ◽  
Author(s):  
F. Calenge ◽  
A. Faure ◽  
M. Goerre ◽  
C. Gebhardt ◽  
W. E. Van de Weg ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Resistance Gene ◽  
Resistance Genes ◽  
Quantitative Trait ◽  
Venturia Inaequalis ◽  
Scab Resistance ◽  
Breeding Programs ◽  
Apple Breeding ◽  
Trait Loci ◽  
New Races

The major scab resistance gene Vf, extensively used in apple breeding programs, was recently overcome by the new races 6 and 7 of the fungal pathogen Venturia inaequalis. New, more durable, scab resistance genes are needed in apple breeding programs. F1 progeny derived from the cross between partially resistant apple cv. Discovery and apple hybrid ‘TN10-8’ were inoculated in the greenhouse with eight isolates of V. inaequalis, including isolates able to overcome Vf. One major resistance gene, Vg, and seven quantitative trait loci (QTL) were identified for resistance to these isolates. Three QTL on linkage group (LG)12, LG13, and LG15 were clearly isolate-specific. Another QTL on LG5 was detected with two isolates. Three QTL on LG1, LG2, and LG17 were identified with most isolates tested, but not with every isolate. The QTL on LG2 displayed alleles conferring different specificities. This QTL co-localized with the major scab resistance genes Vr and Vh8, whereas the QTL on LG1 colocalized with Vf. These results contribute to a better understanding of the genetic basis of the V. inaequalis-Malus × domestica interaction.

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