scholarly journals Three-dimensional trajectories and network analyses of group behaviour within chimney swift flocks during approaches to the roost

2017 ◽  
Vol 284 (1849) ◽  
pp. 20162602 ◽  
Author(s):  
Dennis J. Evangelista ◽  
Dylan D. Ray ◽  
Sathish K. Raja ◽  
Tyson L. Hedrick

Chimney swifts ( Chaetura pelagica ) are highly manoeuvrable birds notable for roosting overnight in chimneys, in groups of hundreds or thousands of birds, before and during their autumn migration. At dusk, birds gather in large numbers from surrounding areas near a roost site. The whole flock then employs an orderly, but dynamic, circling approach pattern before rapidly entering a small aperture en masse . We recorded the three-dimensional trajectories of ≈1 800 individual birds during a 30 min period encompassing flock formation, circling, and landing, and used these trajectories to test several hypotheses relating to flock or group behaviour. Specifically, we investigated whether the swifts use local interaction rules based on topological distance (e.g. the n nearest neighbours, regardless of their distance) rather than physical distance (e.g. neighbours within x m, regardless of number) to guide interactions, whether the chimney entry zone is more or less cooperative than the surrounding flock, and whether the characteristic subgroup size is constant or varies with flock density. We found that the swift flock is structured around local rules based on physical distance, that subgroup size increases with density, and that there exist regions of the flock that are less cooperative than others, in particular the chimney entry zone.

Biofeedback ◽  
2014 ◽  
Vol 42 (2) ◽  
pp. 37-38
Author(s):  
Moss Donald ◽  
Rex Cannon ◽  
Robert Thatcher ◽  
J. Lucas Koberda ◽  
Jay Gunkelman

The cover of this special issue shows a three-dimensional graphic of a brain depicting the “reward network” as a target for biofeedback intervention. The article by Robert Thatcher in this issue discusses the use of functional network analyses and a Z-score approach to selectively target a network of brain areas for training. (The editors are grateful to Dr. Thatcher for this graphic.)


2020 ◽  
Vol 237 ◽  
pp. 03023
Author(s):  
Xu Wang ◽  
Jing Gao ◽  
Yuefeng Zhao

From February 7 to 10, 2018, due to unfavorable meteorological conditions, a process of air pollution occurred in Hefei and its surrounding areas, and moderate to severe pollution occurred in the municipal districts. Aiming at the pollution process in Hefei City, under the leadership of Hefei Environmental Protection Bureau and with the support of Hefei Environmental Protection Sub-bureau, four fixed observation points were selected to carry out all-weather environmental network monitoring pilot projects in Hefei municipal jurisdiction area. At the same time, a "mobile monitoring vehicle of atmospheric environmental pollution" was arranged to conduct all-weather walking observation to real-time monitor the spatial distribution and three-dimensional space of pollutants in Hefei urban area、inter-transport and space subsidence and diffusion. The RaySound Series Portable high-energy high-frequency lidar was used in the environmental networking monitoring in Hefei. The air quality in the observation area was evaluated comprehensively by using the mode of fixed vertical monitoring, plane scanning monitoring and mobile walking monitoring.


1989 ◽  
Vol 62 (4) ◽  
pp. 959-970 ◽  
Author(s):  
K. C. Sato ◽  
J. Tanji

1. The precentral motor cortex, including the anterior bank of the central sulcus of monkey (Macaca fuscata), was systemically penetrated with microelectrodes to determine the spatial organization of the microexcitable cortical elements that can produce responses in digit muscles. 2. At 200-microns intervals on each electrode track, low-current intracortical microstimuli were delivered and the muscle responses evoked from four digit muscles were recorded. The responses, obtained with 5, 8, 15, and 25 microA, were quantified and plotted on a map displaying an unfolded view of the precentral gyrus. 3. For all four muscles studied [first interosseus, thenar, extensor digitorum communis (EDC) and flexor digitorum profundus (FDP)], the effective stimulus points evoking muscle responses at a current of 5 microA were scattered over wide areas. The low-threshold foci, largely buried in the anterior bank of the central sulcus but partly extending to a region rostral to the sulcus, were found in multiple spots separated by a few millimeters. 4. Stimulation of individual sites at a current of 5 microA often evoked responses in several different muscles. Antagonist muscles were frequently coactivated. 5. A three-dimensional display of the distribution of response magnitude evoked from the precentral cortex indicates several peaks for each digit muscle. The peaks were either sharply demarcated from surrounding areas of minimal responses or gradually shifted into regions of low-grade responses. 6. Taken together, the data suggest that the digit area of motor cortex does not have a simple organization in which each muscle is represented by a single focus. Rather, each muscle has multiple foci that have varying degrees of efficacy in producing responses and with variable overlap onto foci of other muscles.


Author(s):  
Mehrdad Panahpour Tehrani ◽  
Tomoyuki Tezuka ◽  
Kazuyoshi Suzuki ◽  
Keita Takahashi ◽  
Toshiaki Fujii

A free-viewpoint image can be synthesized using color and depth maps of reference viewpoints, via depth-image-based rendering (DIBR). In this process, three-dimensional (3D) warping is generally used. A 3D warped image consists of disocclusion holes with missing pixels that correspond to occluded regions in the reference images, and non-disocclusion holes due to limited sampling density of the reference images. The non-disocclusion holes are those among scattered pixels of a same region or object. These holes are larger when the reference viewpoints and the free viewpoint images have a larger physical distance. Filling these holes has a crucial impact on the quality of free-viewpoint image. In this paper, we focus on free-viewpoint image synthesis that is precisely capable of filling the non-disocclusion holes caused by limited sampling density, using superpixel segmentation. In this approach, we proposed two criteria for segmenting depth and color data of each reference viewpoint. By these criteria, we can detect which neighboring pixels should be connected or kept isolated in each references image, before being warped. Polygons enclosed by the connected pixels, i.e. superpixel, are inpainted by k-means interpolation. Our superpixel approach has a high accuracy since we use both color and depth data to detect superpixels at the location of the reference viewpoint. Therefore, once a reference image that consists of superpixels is 3D warped to a virtual viewpoint, the non-disocclusion holes are significantly reduced. Experimental results verify the advantage of our approach and demonstrate high quality of synthesized image when the virtual viewpoint is physically far from the reference viewpoints.


2021 ◽  
Vol 15 ◽  
Author(s):  
Jinghui Lin ◽  
Lei Mou ◽  
Qifeng Yan ◽  
Shaodong Ma ◽  
Xingyu Yue ◽  
...  

Trigeminal neuralgia caused by paroxysmal and severe pain in the distribution of the trigeminal nerve is a rare chronic pain disorder. It is generally accepted that compression of the trigeminal root entry zone by vascular structures is the major cause of primary trigeminal neuralgia, and vascular decompression is the prior choice in neurosurgical treatment. Therefore, accurate preoperative modeling/segmentation/visualization of trigeminal nerve and its surrounding cerebrovascular is important to surgical planning. In this paper, we propose an automated method to segment trigeminal nerve and its surrounding cerebrovascular in the root entry zone, and to further reconstruct and visual these anatomical structures in three-dimensional (3D) Magnetic Resonance Angiography (MRA). The proposed method contains a two-stage neural network. Firstly, a preliminary confidence map of different anatomical structures is produced by a coarse segmentation stage. Secondly, a refinement segmentation stage is proposed to refine and optimize the coarse segmentation map. To model the spatial and morphological relationship between trigeminal nerve and cerebrovascular structures, the proposed network detects the trigeminal nerve, cerebrovasculature, and brainstem simultaneously. The method has been evaluated on a dataset including 50 MRA volumes, and the experimental results show the state-of-the-art performance of the proposed method with an average Dice similarity coefficient, Hausdorff distance, and average surface distance error of 0.8645, 0.2414, and 0.4296 on multi-tissue segmentation, respectively.


Author(s):  
G.D.W. Smith ◽  
A. Cerezo ◽  
C.R.M. Grovenor ◽  
T.J. Godfrey ◽  
R.P. Setna

The combination of a field ion microscope with a time-of-flight mass spectrometer provides the capability for chemical microanalysis at the single atom level. Such an instrument is termed an Atom Probe. Conventionally, the connection between the microscope and the mass spectrometer is made via a small aperture hole in the imaging screen. This defines a region on the specimen, typically about 2nm across, from which the analysis is obtained. The disadvantage of this arrangement is that other regions of the specimen cannot be examined, as ions from all but the selected area strike the image screen and therefore do not pass into the mass spectrometer. In order to overcome this problem, we have developed a version of the Atom Probe which incorporates a wide-angle position sensitive detector system. This instrument, which we have termed the POSAP, is shown schematically in figure 1. Typically, the field of view in this instrument is about 20nm across. The number of ions collected per atom layer removed from the specimen surface is therefore approximately 5,000.


Neurosurgery ◽  
2005 ◽  
Vol 56 (3) ◽  
pp. E628-E628 ◽  
Author(s):  
Gabriela-del-Rocío Chávez Chávez ◽  
Antonio A.F. De Salles ◽  
Timothy D. Solberg ◽  
Alessandra Pedroso ◽  
Dulce Espinoza ◽  
...  

Abstract OBJECTIVE: The aim of this study was to demonstrate the use and applications of the three-dimensional fast imaging employing steady-state acquisition (3-D-FIESTA) magnetic resonance imaging sequence in targeting and planning for stereotactic radiosurgery of trigeminal neuralgia. METHODS: A 3-D-FIESTA sequence for visualization of cranial nerves in the cranial base was added to the routine magnetic resonance imaging scan to enhance the treatment planning for trigeminal neuralgia. T1-weighted images, 1 mm thick, were directly compared with the FIESTA sequence for the exact visualization of the trigeminal entry zone and surrounding vasculature. The target accuracy was evaluated by image fusion of computed tomographic and magnetic resonance imaging scans. The anatomy visualized with the FIESTA sequence was validated by direct inspection of the gross anatomic specimens of the trigeminal complex. RESULTS: A total of 15 consecutive patients, 10 women and 5 men, underwent radiosurgery for essential trigeminal neuralgia between April and July, 2003. The mean age of the patients was 65.2 years (range, 24–83 yr). Nine patients had right-sided symptoms. Four patients had had previous surgery (two microvascular decompression, one percutaneous rhizotomy, and one radiofrequency thermocoagulation). The 3-D-FIESTA sequence successfully demonstrated the trigeminal complex (root entry zone, trigeminal ganglion, rootlets, and vasculature) in 14 patients (93.33%). The 3-D-FIESTA sequence also allowed visualization of the branches of the trigeminal nerve inside Meckel's cavity. This exact visualization correlated precisely with the anatomic specimens. In one patient (6.66%), it was not possible to demonstrate the related vasculature. However, the other structures were clearly visualized. CONCLUSION: The 3-D-FIESTA sequence is used in this study for demonstration of the exact anatomy of the trigeminal complex for the purpose of radiosurgical planning and treatment of trigeminal neuralgia. With such imaging techniques, radiosurgical targeting of specific trigeminal nerve branches may be feasible. It has not been possible previously to target individual branches of the trigeminal nerve.


2021 ◽  
Vol 7 (5) ◽  
pp. eabd0957
Author(s):  
Shambavi Ganesh ◽  
Thomas Hu ◽  
Eric Woods ◽  
Mayar Allam ◽  
Shuangyi Cai ◽  
...  

Spatially resolved RNA and protein molecular analyses have revealed unexpected heterogeneity of cells. Metabolic analysis of individual cells complements these single-cell studies. Here, we present a three-dimensional spatially resolved metabolomic profiling framework (3D-SMF) to map out the spatial organization of metabolic fragments and protein signatures in immune cells of human tonsils. In this method, 3D metabolic profiles were acquired by time-of-flight secondary ion mass spectrometry to profile up to 189 compounds. Ion beams were used to measure sub–5-nanometer layers of tissue across 150 sections of a tonsil. To incorporate cell specificity, tonsil tissues were labeled by an isotope-tagged antibody library. To explore relations of metabolic and cellular features, we carried out data reduction, 3D spatial correlations and classifications, unsupervised K-means clustering, and network analyses. Immune cells exhibited spatially distinct lipidomic fragment distributions in lymphatic tissue. The 3D-SMF pipeline affects studying the immune cells in health and disease.


Geophysics ◽  
1983 ◽  
Vol 48 (6) ◽  
pp. 792-793
Author(s):  
S. Parker Gay

Gay (1971) described the application of three‐dimensional (3-D) viewing to geophysical data, principally contoured magnetic and gravity data. Subsequently, the method has been extensively applied to actual physical data, such as structural contour maps, isopach maps, and topography, both subaerial and submarine (e.g., Gay, 1981). These types of data have the same dimensions in the vertical and horizontal directions, i.e., physical distance. The question has therefore arisen many times over the years as to the mathematical relationship between the vertical and horizontal scales in the stereo model—what is the actual vertical exaggeration of a stereo view and how does one go about measuring it, or controlling it in case one is constructing a stereo pair? This question was not addressed in the 1971 paper, because there is no “true” vertical scale for gravity or magnetic maps, and hence no “exaggeration” (different dimensions in vertical and horizontal directions).


2002 ◽  
Vol 49 ◽  
pp. 119-128
Author(s):  
Lykke Gemmer ◽  
Søren B. Nielsen ◽  
Holger Lykke Andersen

The response of a heterogeneous lithosphere to a compressional stress field is studied using a three-dimensional thermo-mechanical finite element model. Weak zones in the lithosphere thicken and act as loads that pull down the lithosphere in regions around the weak zones. Strong zones are subjected to less lithospheric thickening than the surroundings and produce surface depressions and uplift in the surrounding areas. The model is used to study the Late Cretaceous and Paleocene differential vertical movements in the eastern North Sea area. The Sorgenfrei-Tornquist Zone is assumed to be a pre-existing weak crustal zone, which inverts during compression and produces marginal basins by loading the lithosphere. The area of the Silkeborg Gravity High is an example of a pre-existing strong crustal zone which subsides during compression. Moho topography in the area gives rise to lateral strength variations, which result in surface uplift where Moho is deep and subsidence where Moho is shallow. These effects, together with the lateral variations of the thermal structure and the stress field, determine the overall Late Cretaceous-Paleocene distribution of vertical movements of the area. This has implications for the pattern of erosion, sediment transport and the distribution of sediment facies.


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