scholarly journals Evidence for the temporal regulation of insect segmentation by a conserved set of developmental transcription factors

2017 ◽  
Author(s):  
Erik Clark ◽  
Andrew D. Peel

ABSTRACTLong-germ insects, such as the fruit fly Drosophila melanogaster, pattern their segments simultaneously, whereas short germ insects, such as the beetle Tribolium castaneum, pattern their segments sequentially, from anterior to posterior. While the two modes of segmentation at first appear to be very different, many details of segmentation gene expression are surprisingly similar between long-germ and short-germ species. Collectively, these observations hint that insect segmentation may involve fairly conserved patterning mechanisms, which occur within an evolutionarily malleable spatiotemporal framework. Based on genetic and comparative evidence, we now propose that, in both Drosophila and Tribolium embryos, the temporal progression of the segmentation process is regulated by a temporal sequence of Caudal, Dichaete, and Odd-paired expression. These three transcription factors are broadly expressed in segmenting tissues, providing spatiotemporal information that intersects with the information provided by periodically-expressed segmentation genes such as the pair-rule factors. However, they are deployed differently in long-germ versus short-germ insects, acting as simple timers in Drosophila, but as smooth, retracting wavefronts in Tribolium, compatible with either gap gene-based or oscillator-based generation of periodicity, respectively.


2018 ◽  
Author(s):  
Heike Rudolf ◽  
Christine Zellner ◽  
Ezzat El-Sherif

AbstractRecently, it was shown that anterior-posterior patterning genes in the red flour beetle Tribolium castaneum are expressed sequentially in waves. However, in the fruit fly Drosophila melanogaster, an insect with a derived mode of embryogenesis compared to Tribolium, anterior-posterior patterning genes quickly and simultaneously arise as mature gene expression domains that, afterwards, undergo slight posterior-to-anterior shifts. This raises the question of how a fast and simultaneous mode of patterning, like that of Drosophila, could have evolved from a rather slow sequential mode of patterning, like that of Tribolium. In this paper, we elucidate a mechanism for this evolutionary transition based on a switch from a uniform to a gradient-mediated initialization of the gap gene cascade by maternal Hb. The model is supported by computational analyses and experiments.



2018 ◽  
Author(s):  
Ashley A. Jermusyk ◽  
Sarah E. Gharavi ◽  
Aslesha S. Tingare ◽  
Gregory T. Reeves

AbstractThe anterior-posterior axis of the developing Drosophila melanogaster embryo is patterned by a well-studied gene regulatory network called the Gap Gene Network. This network acts to buffer the developing pattern against noise, thereby minimizing errors in gene expression and preventing patterning defects.In this paper, we sought to discover novel regulatory regions and transcription factors acting in a subset of the Gap network using a selection of wild-caught fly lines derived from the Drosophila Genetic Reference Panel (DGRP). The fly lines in the DGRP contain subtle genomic differences due to natural variation; we quantified the differences in positioning of gene expression borders of two anterior-poster patterning genes, Krüppel (Kr) and Even-skipped in 13 of the DGRP lines. The differences in the positions of Krüppel and Even-skipped were then correlated to specific single nucleotide polymorphisms and insertions/deletions within the select fly lines. Putative enhancers containing these genomic differences were validated for their ability to produce expression using reporter constructs and analyzed for possible transcription factor binding sites. The identified transcription factors were then perturbed and the resulting Eve and Kr positioning was determined. In this way, we found medea, ultraspiracle, glial cells missing, and orthopedia effect Kr and Eve positioning in subtle ways, while knock-down of pangolin produces significant shifts in Kr and subsequent Eve expression patterns. Most importantly this study points to the existence of many additional novel members that have subtle effects on this system and the degree of complexity that is present in patterning the developing embryo.



Development ◽  
1991 ◽  
Vol 111 (4) ◽  
pp. 1121-1135 ◽  
Author(s):  
S.M. Parkhurst ◽  
D. Ish-Horowicz

We have used the hunchback (hb) gap-gene promoter to drive ectopic expression of the pair-rule genes fushi tarazu (ftz), even-skipped (eve) and hairy (h). Unexpectedly, flies transformed with such constructs are viable, despite spatial and temporal mis-regulation of pair-rule expression caused by the fusion genes. We show that fusion gene expression is transcriptionally regulated, such that ectopic expression is suppressed when pattern is established, and present evidence indicating that interstripe hb-ftz expression is repressed by eve. These results are considered in terms of redundant control of pair-rule gene striping. We also discuss the potential dangers of using mis-regulated gene expression to analyse normal function.



2018 ◽  
Vol 5 (8) ◽  
pp. 180458 ◽  
Author(s):  
Eva Jiménez-Guri ◽  
Karl R. Wotton ◽  
Johannes Jaeger

Gap genes are involved in segment determination during early development of the vinegar fly Drosophila melanogaster and other dipteran insects (flies, midges and mosquitoes). They are expressed in overlapping domains along the antero-posterior (A–P) axis of the blastoderm embryo. While gap domains cover the entire length of the A–P axis in Drosophila, there is a region in the blastoderm of the moth midge Clogmia albipunctata , which lacks canonical gap gene expression. Is a non-canonical gap gene functioning in this area? Here, we characterize tarsal-less ( tal ) in C. albipunctata . The homologue of tal in the flour beetle Tribolium castaneum (called milles-pattes, mlpt ) is a bona fide gap gene. We find that Ca-tal is expressed in the region previously reported as lacking gap gene expression. Using RNA interference, we study the interaction of Ca-tal with gap genes. We show that Ca-tal is regulated by gap genes, but only has a very subtle effect on tailless (Ca-tll), while not affecting other gap genes at all. Moreover, cuticle phenotypes of Ca-tal depleted embryos do not show any gap phenotype. We conclude that Ca-tal is expressed and regulated like a gap gene, but does not function as a gap gene in C. albipunctata .



2021 ◽  
Vol 12 ◽  
Author(s):  
Rebekah George ◽  
Ralf Stanewsky

Circadian clocks are cell-autonomous endogenous oscillators, generated and maintained by self-sustained 24-h rhythms of clock gene expression. In the fruit fly Drosophila melanogaster, these daily rhythms of gene expression regulate the activity of approximately 150 clock neurons in the fly brain, which are responsible for driving the daily rest/activity cycles of these insects. Despite their endogenous character, circadian clocks communicate with the environment in order to synchronize their self-sustained molecular oscillations and neuronal activity rhythms (internal time) with the daily changes of light and temperature dictated by the Earth’s rotation around its axis (external time). Light and temperature changes are reliable time cues (Zeitgeber) used by many organisms to synchronize their circadian clock to the external time. In Drosophila, both light and temperature fluctuations robustly synchronize the circadian clock in the absence of the other Zeitgeber. The complex mechanisms for synchronization to the daily light–dark cycles are understood with impressive detail. In contrast, our knowledge about how the daily temperature fluctuations synchronize the fly clock is rather limited. Whereas light synchronization relies on peripheral and clock-cell autonomous photoreceptors, temperature input to the clock appears to rely mainly on sensory cells located in the peripheral nervous system of the fly. Recent studies suggest that sensory structures located in body and head appendages are able to detect temperature fluctuations and to signal this information to the brain clock. This review will summarize these studies and their implications about the mechanisms underlying temperature synchronization.



2007 ◽  
Vol 3 (1) ◽  
pp. 108 ◽  
Author(s):  
Efrat Oron ◽  
Tamir Tuller ◽  
Ling Li ◽  
Nina Rozovsky ◽  
Daniel Yekutieli ◽  
...  


1998 ◽  
Vol 208 (10) ◽  
pp. 558-568 ◽  
Author(s):  
Florian Maderspacher ◽  
Gregor Bucher ◽  
Martin Klingler


2010 ◽  
Vol 43 (5) ◽  
pp. 752-761 ◽  
Author(s):  
Alistair Miles ◽  
Jun Zhao ◽  
Graham Klyne ◽  
Helen White-Cooper ◽  
David Shotton


2014 ◽  
Vol 111 (10) ◽  
pp. 3683-3688 ◽  
Author(s):  
Dmitry Krotov ◽  
Julien O. Dubuis ◽  
Thomas Gregor ◽  
William Bialek

Spatial patterns in the early fruit fly embryo emerge from a network of interactions among transcription factors, the gap genes, driven by maternal inputs. Such networks can exhibit many qualitatively different behaviors, separated by critical surfaces. At criticality, we should observe strong correlations in the fluctuations of different genes around their mean expression levels, a slowing of the dynamics along some but not all directions in the space of possible expression levels, correlations of expression fluctuations over long distances in the embryo, and departures from a Gaussian distribution of these fluctuations. Analysis of recent experiments on the gap gene network shows that all these signatures are observed, and that the different signatures are related in ways predicted by theory. Although there might be other explanations for these individual phenomena, the confluence of evidence suggests that this genetic network is tuned to criticality.



2018 ◽  
Author(s):  
Alba Ventos-Alfonso ◽  
Guillem Ylla ◽  
Xavier Belles

AbstractIn the Endopterygote Drosophila melanogaster, Zelda is a key activator of the zygotic genome during the maternal-to-zygotic transition (MZT). Zelda binds cis-regulatory elements (TAGteam heptamers), and makes chromatin accessible for gene transcription. Recently, Zelda has been studied in two other Endopterygotes: Apis mellifera and Tribolium castaneum, and the Paraneopteran Rhodnius prolixus. We have studied Zelda in the cockroach Blattella germanica, a hemimetabolan, short germ-band, and Polyneopteran species. Zelda protein of B. germanica has the complete set of functional domains, which is typical of lower insects. The TAGteam heptamers of D. melanogaster have been found in the B. germanica genome, and the canonical one, CAGGTAG, is present at a similar relative number in the genome of these two species and in the genome of other insects, suggesting that, although within certain evolutionary constraints, the genome admits as many CAGGTAG motifs as its length allows. Zelda-depleted embryos of B. germanica show defects involving the blastoderm formation and the abdomen development and have genes contributing to these processes down-regulated. We conclude that in B. germanica Zelda strictly activates the zygotic genome, within the MZT, a role conserved in more derived Endopterygote insects. In B. germanica, Zelda is expressed during MZT, whereas in D. melanogaster and T. castaneum it is expressed well beyond this transition. Moreover, in these species and A. mellifera, Zelda has functions even in postembryonic development. The expansion of Zelda expression and functions beyond the MZT in holometabolan species might have been instrumental for the evolutionary transition from hemimetaboly to holometaboly. In particular, the expression of Zelda beyond the MZT during embryogenesis might have allowed building the morphologically divergent holometabolan larva.Author summaryIn early insect embryo development, the protein Zelda is a key activator of the zygotic genome during the maternal-to-zygotic transition. This has been thoroughly demonstrated in the fruit fly Drosophila melanogaster, as well as in the red flour beetle Tribolium castaneum, both species belonging to the most modified clade of endopterygote insects, showing complete (holometabolan) metamorphosis. In these species, Zelda is expressed and have functions in early embryogenesis, in late embryogenesis and in postembryonic stages. We have studied Zelda in the German cockroach, Blattella germanica, which belong to the less modified clade of polyneopteran insects, showing an incomplete (hemimetabolan) metamorphosis. In B. germanica, Zelda is significantly expressed in early embryogenesis, being a key activator of the zygotic genome during the maternal-to-zygotic transition, as in the fruit fly and the red flour beetle. Nevertheless, Zelda is not significantly expressed, and presumably has no functions, in late embryogenesis and in postembryonic stages of the cockroach. The data suggest that the ancestral function of Zelda in insects with hemimetabolan metamorphosis was to activate the zygotic genome, a function circumscribed to early embryogenesis. The expansion of Zelda expression and functions to late embryogenesis and postembryonic stages might have been a key step in the evolutionary transition from hemimetaboly to holometaboly. In hemimetabolan species embryogenesis produces a nymph displaying the essential adult body structure. In contrast, embryogenesis of holometabolan species produces a larva that is morphologically very divergent from the adult. Expression of Zelda in late embryogenesis might have been a key step in the evolution from hemimetaboly to holometaboly, since it would have allowed the building the morphologically divergent holometabolan larva.



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