scholarly journals The influence of Janthinobacterium sp. strain SLB01 on the cell culture of primmorphs of the sponge Lubomirskia baicalensis

2021 ◽  
Author(s):  
Lubov I Chernogor ◽  
Marina G. Eliseikina ◽  
Ivan S Petrushin ◽  
Ekaterina A Chernogor ◽  
Igor V Khanaev ◽  
...  
Keyword(s):  
Cell Culture ◽  
Littoral Zone ◽  
Secretion System ◽  
Type Vi Secretion System ◽  
Bacterial Strains ◽  
Freshwater Sponges ◽  
Janthinobacterium Lividum ◽  
Type Vi Secretion ◽  
Lubomirskia Baicalensis

Sponges (phylum Porifera) are ancient, multicellular metazoans. Freshwater sponges (Demosponges, Lubomirskiidae) dominate the fauna of the littoral zone of Lake Baikal. Over the last years, there have been mass diseases and death of endemic sponges. Previously, the strain Janthinobacterium sp. SLB01 was isolated from the diseased sponge Lubomirskia baicalensis. The studies of the pathogenicity of the strain Janthinobacterium sp. SLB01 for Baikal sponges has not been carried out, therefore we infected experimentally in vitro to determine its pathogenicity by the cell culture of the primmorphs with subsequent isolation, sequencing, and analysis of the genomes. The purpose of the study is to show that the strain Janthinobacterium sp. SLB01 isolated from the diseased sponge L. baicalensis is a pathogen for the cell culture of primmorphs. The bacteria from the infected samples were isolated and identified as strain Janthinobacterium sp. PLB02. A comparative analysis of the genomes of the strains showed that they are practically identical. The genomes of both strains contain genes vioABCDE violacein, flok formation, and strong biofilm, and the type VI secretion system (T6SS), as the primary virulence factor. These bacterial strains based on a comparison of complete genomes showed similarity with strain Janthinobacterium lividum MTR. Isolated strains of Janthinobacterium sp. are pathogens for cell cultures of primmorphs and L. baicalensis sponges. The results of the study will help to expand the understanding of microbial relationships in the development of disease and the death of Baikal sponges.

scholarly journals Bacterial symbionts use a type VI secretion system to eliminate competitors in their natural host

2018 ◽  
Vol 115 (36) ◽  
pp. E8528-E8537 ◽  
Author(s):  
Lauren Speare ◽  
Andrew G. Cecere ◽  
Kirsten R. Guckes ◽  
Stephanie Smith ◽  
Michael S. Wollenberg ◽  
...  
Keyword(s):  
Intraspecific Competition ◽  
Vibrio Fischeri ◽  
Secretion System ◽  
Dependent Manner ◽  
Light Organ ◽  
Type Vi Secretion System ◽  
Type Vi Secretion ◽  
Natural Isolates ◽  
Physical Mixing

Intraspecific competition describes the negative interaction that occurs when different populations of the same species attempt to fill the same niche. Such competition is predicted to occur among host-associated bacteria but has been challenging to study in natural biological systems. Although many bioluminescentVibrio fischeristrains exist in seawater, only a few strains are found in the light-organ crypts of an individual wild-caughtEuprymna scolopessquid, suggesting a possible role for intraspecific competition during early colonization. Using a culture-based assay to investigate the interactions of differentV. fischeristrains, we found “lethal” and “nonlethal” isolates that could kill or not kill the well-studied light-organ isolate ES114, respectively. The killing phenotype of these lethal strains required a type VI secretion system (T6SS) encoded in a 50-kb genomic island. Multiple lethal and nonlethal strains could be cultured from the light organs of individual wild-caught adult squid. Although lethal strains eliminate nonlethal strains in vitro, two lethal strains could coexist in interspersed microcolonies that formed in a T6SS-dependent manner. This coexistence was destabilized upon physical mixing, resulting in one lethal strain consistently eliminating the other. When juvenile squid were coinoculated with lethal and nonlethal strains, they occupied different crypts, yet they were observed to coexist within crypts when T6SS function was disrupted. These findings, using a combination of natural isolates and experimental approaches in vitro and in the animal host, reveal the importance of T6SS in spatially separating strains during the establishment of host colonization in a natural symbiosis.

scholarly journals The Type VI Secretion System Encoded in Salmonella Pathogenicity Island 19 Is Required for Salmonella enterica Serotype Gallinarum Survival within Infected Macrophages

2013 ◽  
Vol 81 (4) ◽  
pp. 1207-1220 ◽  
Author(s):  
Carlos J. Blondel ◽  
Juan C. Jiménez ◽  
Lorenzo E. Leiva ◽  
Sergio A. Álvarez ◽  
Bernardo I. Pinto ◽  
...  
Keyword(s):  
Salmonella Enterica ◽  
Pathogenicity Island ◽  
Secretion System ◽  
Host Cells ◽  
Economic Losses ◽  
Type Vi Secretion System ◽  
Content Type ◽  
Type Vi Secretion ◽  
Core Components

ABSTRACTSalmonella entericaserotype Gallinarum is the causative agent of fowl typhoid, a disease characterized by high morbidity and mortality that causes major economic losses in poultry production. We have reported thatS. Gallinarum harbors a type VI secretion system (T6SS) encoded inSalmonellapathogenicity island 19 (SPI-19) that is required for efficient colonization of chicks. In the present study, we aimed to characterize the SPI-19 T6SS functionality and to investigate the mechanisms behind the phenotypes previously observedin vivo. Expression analyses revealed that SPI-19 T6SS core components are expressed and produced underin vitrobacterial growth conditions. However, secretion of the structural/secreted components Hcp1, Hcp2, and VgrG to the culture medium could not be determined, suggesting that additional signals are required for T6SS-dependent secretion of these proteins.In vitrobacterial competition assays failed to demonstrate a role for SPI-19 T6SS in interbacterial killing. In contrast, cell culture experiments with murine and avian macrophages (RAW264.7 and HD11, respectively) revealed production of a green fluorescent protein-tagged version of VgrG soon afterSalmonellauptake. Furthermore, infection of RAW264.7 and HD11 macrophages with deletion mutants of SPI-19 or strains with genes encoding specific T6SS core components (clpVandvgrG) revealed that SPI-19 T6SS contributes toS. Gallinarum survival within macrophages at 20 h postuptake. SPI-19 T6SS function was not linked toSalmonella-induced cytotoxicity or cell death of infected macrophages, as has been described for other T6SS. Our data indicate that SPI-19 T6SS corresponds to a novel tool used bySalmonellato survive within host cells.

scholarly journals Promoter Swapping Unveils the Role of the Citrobacter rodentium CTS1 Type VI Secretion System in Interbacterial Competition

2012 ◽  
Vol 79 (1) ◽  
pp. 32-38 ◽  
Author(s):  
Erwan Gueguen ◽  
Eric Cascales
Keyword(s):  
Gene Clusters ◽  
Secretion System ◽  
Citrobacter Rodentium ◽  
Type Vi Secretion System ◽  
Content Type ◽  
Type Vi Secretion ◽  
Artificial Induction ◽  
Release Assay ◽  
Promoter Swapping

ABSTRACT The type VI secretion system (T6SS) is a versatile secretion machine dedicated to various functions in Gram-negative bacteria, including virulence toward eukaryotic cells and antibacterial activity. Activity of T6SS might be followed in vitro by the release of two proteins, Hcp and VgrG, in the culture supernatant. Citrobacter rodentium , a rodent pathogen, harbors two T6SS gene clusters, cts1 and cts2 . Reporter fusion and Hcp release assays suggested that the CTS1 T6SS was not produced or not active. The cts1 locus is composed of two divergent operons. We therefore developed a new vector allowing us to swap the two divergent endogenous promoters by P tac and P BAD using the λ red recombination technology. Artificial induction of both promoters demonstrated that the CTS1 T6SS is functional as shown by the Hcp release assay and confers on C. rodentium a growth advantage in antibacterial competition experiments with Escherichia coli .

scholarly journals TheVibrio choleraeType VI Secretion System Can Modulate Host Intestinal Mechanics to Displace Commensal Gut Bacteria

2017 ◽  
Author(s):  
Savannah L. Logan ◽  
Jacob Thomas ◽  
Jinyuan Yan ◽  
Ryan P. Baker ◽  
Drew S. Shields ◽  
...  
Keyword(s):  
Secretion System ◽  
Effector Proteins ◽  
Target Cells ◽  
Type Vi Secretion System ◽  
Zebrafish Model ◽  
Microbial Competition ◽  
Aeromonas Veronii ◽  
Type Vi Secretion ◽  
Commensal Strain

AbstractHost-associated microbiota help defend against bacterial pathogens; the mechanisms that pathogens possess to overcome this defense, however, remain largely unknown. We developed a zebrafish model and used live imaging to directly study how the human pathogenVibrio choleraeinvades the intestine. The gut microbiota of fish mono-colonized by commensal strainAeromonas veroniiwas displaced byV. choleraeexpressing its Type VI Secretion System (T6SS), a syringe-like apparatus that deploys effector proteins into target cells. Surprisingly, displacement was independent of T6SS-mediated killing ofAeromonas, driven instead by T6SS-induced enhancement of zebrafish intestinal movements that led to expulsion of the resident commensal by the host. Deleting an actin crosslinking domain from the T6SS apparatus returned intestinal motility to normal and thwarted expulsion, without weakeningV. cholerae′sability to killAeromonas in vitro. Our finding that bacteria can manipulate host physiology to influence inter-microbial competition has implications for both pathogenesis and microbiome engineering.

scholarly journals Microbiome analysis of healthy and diseased sponges Lubomirskia baicalensis by using cell cultures of primmorphs

2019 ◽  
Author(s):  
Lubov Chernogor ◽  
Elizabet Klimenko ◽  
Igor Khanaev ◽  
Sergei Belikov
Keyword(s):  
Cell Culture ◽  
Cell Cultures ◽  
Lake Baikal ◽  
Freshwater Sponges ◽  
Opportunistic Bacteria ◽  
Lubomirskia Baicalensis ◽  
Gene 16S Rrna ◽  
Sponge Disease ◽  
Pathogenic Agents

Background. Freshwater sponges (Demosponges, Lubomirskiidae) are dominated in the littoral zone Lake Baikal in the biomass of benthic organisms and represent complex consortia of many species of eukaryotes and prokaryotes. A distinctive feature of sponges from Lake Baikal is their ability to live in symbiosis with various kinds of chlorophyll containing microalgae. Recently there have been massive diseases and the death of freshwater sponges. The etiology and ecology of these events remain unknown. Purpose. The purpose of the research was to use cell culture of primmorphs in vitro to study the microbiomes of healthy and diseased sponges to show the transmission of pathogenic agents from diseased sponges to cell cultures. Methods. The cell culture of primmorphs sponge Lubomirskia baicalensis was used to study microbiome communities in diseased and sick sponges in comparison with healthy sponge with subsequent sequencing of gene 16S rRNA and analysis of changes in microbiomes. Results. Results this study were show that use of cell culture of primmorphs in vitro is equivale of healthy sponge. Microbial community of healthy sponge and primmorphs was grouped separately from the community of diseased sponges and infected primmorphs, which confirms the suitability the cell culture of primmorphs, as a model sponge system. We found the mass death of green symbionts (Chlorophyta) and a shift in the microbial communities of sponges/primmorphs, associated with increase in relative abundant of different phyla Bacteroidetes and Proteobacteria with dominated families Flavobacteriaceae and Burkholderiaceae, Moraxellaceae in diseased sponges and infected cell cultures of primmorphs. Conclusions. This approach allowed us, using the cell culture of primmorphs, to identify potential opportunistic bacteria that can work together, which possibly enhances their action. The primmorphs system described here is a powerful new model system for studying basic mechanisms of the development of sponge disease, which will be valuable in future studies.

scholarly journals Microbiome analysis of healthy and diseased sponges Lubomirskia baicalensis by using cell cultures of primmorphs

PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e9080
Author(s):  
Lubov Chernogor ◽  
Elizaveta Klimenko ◽  
Igor Khanaev ◽  
Sergei Belikov
Keyword(s):  
Cell Culture ◽  
Cell Cultures ◽  
Lake Baikal ◽  
Mass Mortality ◽  
Rrna Gene ◽  
Freshwater Sponges ◽  
Lubomirskia Baicalensis ◽  
Sponge Disease ◽  
Microbe Interactions

Endemic sponges (Demosponges, Lubomirskiidae) dominate the fauna of the littoral zone of Lake Baikal. These freshwater sponges live in symbiosis with diverse eukaryotes and prokaryotes, including chlorophyll-containing microalgae. Within the last 5 years, the incidence of sponge disease and mortality events in Lake Baikal has increased. The etiology and ecology of these events remain unknown, in part because of the lack of models to study sponge-microbe interactions. In this work, we tested the use of primmorph cell cultures of Lubomirskia baicalensis as a tool for investigating the microbiomes of sponges. We infected primmorphs, cultured in vitro, with samples from diseased sponges and observed, by microscopy, disease symptoms, including loss of green symbionts, associated with mass die-off events. Subsequent sequencing of 16S rRNA gene fragments revealed that the microbiome community of healthy sponge and primmorphs formed a group separate from the community of diseased sponges and infected primmorphs. This confirms the suitability of the primmorph cell culture as a model sponge system. We also discovered mass mortality of green symbionts (Chlorophyta) was associated with a shift in the microbial communities of sponges/primmorphs. Microbes in diseased sponges, and infected primmorphs, belonged mainly to the phyla Bacteroidetes and Proteobacteria and these families Flavobacteriaceae, Burkholderiaceae, and Moraxellaceae. Primmorphs cell culture may provide a model to study interactions between these bacteria and their host and elucidate the cause of mass mortality events.

scholarly journals Temperature and growth phase influence the outer-membrane proteome and the expression of a type VI secretion system in Yersinia pestis

Microbiology ◽  
2009 ◽  
Vol 155 (2) ◽  
pp. 498-512 ◽  
Author(s):  
Rembert Pieper ◽  
Shih-Ting Huang ◽  
Jeffrey M. Robinson ◽  
David J. Clark ◽  
Hamid Alami ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Outer Membrane ◽  
Subcellular Fractionation ◽  
Secretion System ◽  
Dependent Manner ◽  
Type Vi Secretion System ◽  
Extracellular Medium ◽  
Type Vi Secretion

Yersinia pestis cells were grown in vitro at 26 and 37 °C, the ambient temperatures of its flea vector and its mammalian hosts, respectively, and subjected to subcellular fractionation. Abundance changes at 26 vs 37 °C were observed for many outer-membrane (OM) proteins. The cell adhesion protein Ail (y1324) and three putative small β-barrel OM proteins (y1795, y2167 and y4083) were strongly increased at 37 °C. The Ail/Lom family protein y1682 (OmpX) was strongly increased at 26 °C. Several porins and TonB-dependent receptors, which control small molecule transport through the OM, were also altered in abundance in a temperature-dependent manner. These marked differences in the composition of the OM proteome are probably important for the adaptation of Y. pestis to its in vivo life stages. Thirteen proteins that appear to be part of an intact type VI secretion system (T6SS) were identified in membrane fractions of stationary-phase cells grown at 26 °C, but not at 37 °C. The corresponding genes are clustered in the Y. pestis KIM gene locus y3658–y3677. The proteins y3674 and y3675 were particularly abundant and co-fractionated in a M r range indicative of participation in a multi-subunit complex. The soluble haemolysin-coregulated protein y3673 was even more abundant. Its release into the extracellular medium was triggered by treatment of Y. pestis cells with trypsin. Proteases and other stress-response-inducing factors may constitute environmental cues resulting in the activation of the T6SS in Y. pestis.

scholarly journals The impact of type VI secretion system, bacteriocins and antibiotics on competition amongst Soft-RotEnterobacteriaceae: Regulation of carbapenem biosynthesis by iron and the transcriptional regulator Fur

2018 ◽  
Author(s):  
Divine Yutefar Shyntum ◽  
Ntombikayise Nkomo ◽  
Alessandro Rino Gricia ◽  
Ntwanano Luann Shigange ◽  
Daniel Bellieny-Rabelo ◽  
...  
Keyword(s):  
Growth Inhibition ◽  
Plant Pathogens ◽  
Soft Rot ◽  
Secretion System ◽  
Economic Losses ◽  
Computational Techniques ◽  
In Planta ◽  
Type Vi Secretion System ◽  
Type Vi Secretion

AbstractPlant microbial communities’ complexity provide a rich model for investigation on biochemical and regulatory strategies involved in interbacterial competition. Within these niches, the soft rotEnterobacteriaceae(SRE) comprise an emerging group of plant-pathogens inflicting soft rot/black-leg diseases and causing economic losses worldwide in a variety of crops. In this report, a range of molecular and computational techniques are utilized to survey the contribution of antimicrobial factors such as bacteriocins, carbapenem antibiotic and type VI secretion system (T6SS) in interbacterial competition among plant-pathogens/endophytes using an aggressive SRE as a case study (Pectobacterium carotovorumsubsp.brasiliensestrain PBR1692 –Pcb1692). A preliminary screening using next-generation sequencing of 16S rRNA comparatively analysing healthy and diseased potato tubers, followed byin vitrocompetition assays, corroborated the aggressiveness ofPcb1692 against several relevant taxa sharing this niche ranging from Proteobacteria toFirmicutes. The results showed growth inhibition of several Proteobacteria by Pcb1692 depends either on carbapenem or pyocin production. Whereas for targetedFirmicutes, only pyocin seems to play a role in growth inhibition byPcb1692. Further analyses elucidated that although T6SS confers no relevant advantage duringin vitrocompetition, a significant attenuation in competition by the mutant strain lacking a functional T6SS was observedin planta. Furthermore, production of carbapenem byPcb1692 was observably dependent on the presence of environmental iron and oxygen. Additionally, upon deletion offur, slyA andexpI regulators, carbapenem production ceased, implying a complex regulatory mechanism involving these three genes. Potential Fur binding sites found upstream ofslyA,carR andexpR inPectobacteriumgenomes harboring carbapenem-associated genes further suggests a conserved regulatory pattern in the genus, in which carbapenem might be modulated in response to iron through the control exerted by Fur over secondary regulators. Furthermore, we unveiled the striking role played by S-pyocin in growth inhibition within the SRE group.Authors SummaryFor many phytopathogenic bacteria, more is known about interactions within the host and virulence factors used for host colonisation while relatively less is known about microbe-microbe interactions and factors that shape niche colonisation. The soft rotEnterobacteriaceae(SRE) comprise an emerging group of phytopathogens causing soft rot/black-leg diseases in a variety of crops leading to huge economic losses worldwide. In this report, a range of molecular and computational techniques are utilized to survey the contribution of antimicrobial factors such as bacteriocins, carbapenem antibiotic and type VI secretion system (T6SS) in interbacterial competition among plant-pathogens/endophytes using an aggressive SRE as a case study (Pcb1692). Our results show thatPcb1692 inhibits growth of other SRE and several potato endophytes using either the type VI secretion, carbapenem or bacteriocins. Carbapenem plays a role in both inter and intrabacterial competitionin vitro, while thePcb1692T6SS plays a role in interbacterial competitionin planta(in potato tubers). We also demonstrate that carbapenem regulation requires the presence of environmental iron and oxygen in a complex network consisting ofPcb1692 Fur, SlyA, and ExpI. The presence of these gene homologs in several SREs suggests that they too can deploy similar antimicrobials to target other bacteria.

scholarly journals Characterization of a Type VI Secretion System vgrG2 Gene in the Pathogenicity of Burkholderia thailandensis BPM

2022 ◽  
Vol 12 ◽  
Author(s):  
Jin Li ◽  
Wei-wei Hu ◽  
Guo-xin Qu ◽  
Xiao-rong Li ◽  
Yi Xiang ◽  
...  
Keyword(s):  
Secretion System ◽  
Host Cells ◽  
Type Vi Secretion System ◽  
Burkholderia Thailandensis ◽  
Gram Negative ◽  
Type Vi Secretion ◽  
New Perspective ◽  
Protein Secreting

Burkholderia thailandensis is a clinically underestimated conditional pathogen in the genus Burkholderia, the pathogenicity of the infection caused by B. thailandensis remains poorly understood. According to previous studies, Type-VI secretion system (T6SS) is a protein secreting device widely existing in Gram-negative bacilli. Valine-glycine repeat protein G (VgrG) is not only an important component of T6SS, but also a virulence factor of many Gram-negative bacilli. In one of our previous studies, a unique T6SS vgrG gene (vgrG2 gene) was present in a virulent B. thailandensis strain BPM (BPM), but not in the relatively avirulent B. thailandensis strain E264 (E264). Meanwhile, transcriptome analysis of BPM and E264 showed that the vgrG2 gene was strongly expressed in BPM, but not in E264. Therefore, we identified the function of the vgrG2 gene by constructing the mutant and complemented strains in this study. In vitro, the vgrG2 gene was observed to be involved in the interactions with host cells. The animal model experiment showed that the deletion of vgrG2 gene significantly led to the decrease in the lethality of BPM and impaired its ability to trigger host immune response. In conclusion, our study provides a new perspective for studying the pathogenicity of B. thailandensis and lays the foundation for discovering the potential T6SS effectors.

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