scholarly journals Bioactivity-driven high throughput screening of microbiomes of medicinal plants for discovering new biological control agents

2019 ◽  
Author(s):  
Irum Iqrar ◽  
Zabta Khan Shinwari ◽  
Ashraf El-Sayed ◽  
Gul Shad Ali
Keyword(s):  
Biological Control ◽  
Medicinal Plants ◽  
Ethyl Acetate ◽  
High Throughput Screening ◽  
Bacterial Species ◽  
Rrna Gene ◽  
Biological Control Agents ◽  
Detached Leaf Assay ◽  
Detached Leaf

ABSTRACTIn a preliminary DNA-based microbiome studies, diverse culturable and unculturable bacterial taxa were identified in the roots and rhizospheres of different medicinal plants. In this report, culturable endophytic bacteria were isolated from four economically important medicinal plants Dodonaea viscosa, Fagonia indica, Caralluma tuberculata and Calendula arvensis. On the basis of initial antimicrobial screening, nine bacterial species in seven different genera, Streptomyces, Pseudomonas, Enterobacter, Bacillus, Pantoea, Pseudarthrobacter and Delftia, were selected for further analyses. These bacteria were identified using 16S rRNA gene sequencing. Antimicrobial assays of these selected bacteria revealed that Pseudomonas taiwanensis has strong anti-Phytophthora activity. Volatiles produced by P. taiwanensis inhibited growth of P. parasitica more than 80%. Ethyl acetate extracts of S. alboniger MOSEL-RD3, P. taiwanensis MOSEL-RD23, E. hormaechei MOSEL-FLS1 and B. tequilensis MOSEL-FLS3 and D. lacustris MB322 also displayed high potency against P. parasitica. All these bacterial extracts showed strong inhibition against P. parasitica at different concentrations (4 µg/mL – 400 µg/mL). Bacterial extracts showing higher bioactivity (>80% inhibition in vitro) were selected for detached-leaf assay against P. parasitica on tobacco. In detached-leaf assay, application of 1% ethyl acetate bacterial extract of MOSE L-RD3, MOSEL-RD23, MOSEL-FLS1, MOSEL-FLS3 and MB322 reduced lesion sizes and lesion frequencies caused by P. parasitica by 68 to 81%. Over all P. taiwenensis MOSEL-RD23 showed positive activities for all the assays. Analysing the potential of bacterial endophytes as biological control agents can potentially lead to the formulation of broad-spectrum biopesticides for sustainable production of crops.

Biocontrol of seed-borne Alternaria raphani and A. brassicicola

1987 ◽  
Vol 33 (10) ◽  
pp. 850-856 ◽  
Author(s):  
G. Vannacci ◽  
G. E. Harman
Keyword(s):  
Biological Control ◽  
Host Range ◽  
Trichoderma Harzianum ◽  
Pythium Species ◽  
Biological Control Agents ◽  
Fusarium Sp ◽  
Chamber Studies ◽  
Growth Chamber Studies ◽  
Radish Seedlings

Forty-two microorganisms were tested as biological control agents against Alternaria raphani and A. brassicicola. Tests were conducted for in vitro antagonistic ability, for ability to control the pathogens on naturally infected seeds germinated on moistened blotters, and in planting mix in growth chamber studies, and for their ability to reduce pod infection. The organisms tested were obtained from cruciferous seeds or were strains already identified as being effective against soil-borne Pythium species. The blotter test indicated that six organisms increased both the number of healthy seedlings and the number of seedlings produced from A. raphani infected radish seeds. An additional seven strains improved either germination or increased the number of healthy seedlings. Twenty-nine organisms increased the number of healthy cabbage seedlings from A. brassicicola infected seeds, but total germination was not modified by any treatment. Experiments in planting mix showed that five antagonists (Chaetomium globosum, two strains of Trichoderma harzianum, T. koningii, and Fusarium sp.) increased the number of healthy plants in both radish samples tested, while four additional antagonists provided a significant increase in only one of the samples tested. The five antagonists that consistently increased numbers of healthy radish seedlings also decreased pod infection by A. raphani. None were as effective as iprodrone, however. Several effective antagonists were found to be mycoparasitic against Alternaria spp. Some strains of Trichoderma previously found to be effective against Pythium spp. were also effective against Alternaria spp., indicating that these strains have a wide host range.

scholarly journals Daily Indexes for Predation and Growth of Nematophagous Mushrooms Species of Hohenbuehelia (Pleurotaceae) on Panagrellus redividus

2018 ◽  
Vol 10 (3) ◽  
pp. 276
Author(s):  
Cleonice Lubian ◽  
Danielle Dutra Martinha ◽  
Roberto Luis Portz ◽  
Alexandre Gonçalves dos Santos e Silva Filho ◽  
Vagner Gularte Cortez ◽  
...  
Keyword(s):  
Biological Control ◽  
Growth Speed ◽  
Test Evaluation ◽  
Biological Control Agents ◽  
Panagrellus Redivivus ◽  
Mycelia Growth ◽  
Living Organisms

Biological control is a method of controlling pests through the use of other living organisms. The purposes of this study were to test Hohenbuehelia species as biological control agents against Panagrellus redivivus in vitro, evaluating nematodes influence on mycelia growth; establishing daily indexes for predation and growth and setting predation percentage. Five species previously identified as 436-Hohenbuehelia mastrucata (Nematoctonus hamatus), 528-H. bullulifera (not described so far), 581-H. paraguayensis (N. sp.), 582-H. sp. (N. sp.) and 631-H. portegna (N. campylosporus) were submitted to anamorphic purification directly from basidioma. Afterwards, 100 nematodes were added to each pure colony for predation test. Evaluation started right after 24 hours of nematode-fungus interaction. Immobilized and/or penetrated nematodes were counted and mycelia growth was measured. Results were subjected to variance analyses. Hohenbuehelia mastrucata had the best performance in growth speed, followed by H. portegna and H. paraguayensis; Nematodes multiplyied much but none specie grew more as an influence of their movement under mycelium, however all species formed trap devices and some of them produced adhesive or repelent substances. Trap devices were formed in control plates also. The plates of H. paraguayensis without nematodes grew more than treatments. Cumulative predation of H. portegna was the highest at 24 (195.5%) and 48 hours (235%). At the last evaluation day, H. paraguayensis preyed the same amount (185.75%) than H. portegna, followed by H. mastrucata (109.51%). Resulst of predation daily indexes displayed chronological activity for each isolate, where H. portegna was very reactive at first 24 hours, H. mastrucata raised its predacious activity in 48 hours being constant from this time on and H. paraguayensis pointed out itself at 72 hours. Other species presented low predation and growth indexes throughout experiment.

scholarly journals In vitro and in vivo Assay for Assessment of the Biological Control Potential of Streptomyces sp. KT

2017 ◽  
Vol 7 (1) ◽  
pp. 10
Author(s):  
Tatsuya Ohike ◽  
Minori Maeda ◽  
Tetsuya Matsukawa ◽  
Masahiro Okanami ◽  
Shin’ichiro Kajiyama ◽  
...  
Keyword(s):  
Biological Control ◽  
Suppressive Effect ◽  
Phytopathogenic Fungi ◽  
Dual Culture ◽  
Biological Control Agents ◽  
Bipolaris Oryzae ◽  
Biological Control Potential ◽  
Dual Culture Assay

Rhizoctonia solani is fungal plant pathogen that infects many different host plants. Recently, biological control agents that are friendly to the environment and ecosystems have attracted much attention as an alternative to the use of chemical fungicide which have been used worldwide to control soil borne pathogens including R. solani. In this study, 53 strains of actinomycetes isolated from environmental soils, and antifungal activities of them were assessed by the dual culture assay. Strain KT showed strong inhibitory activities against 8 phytopathogenic fungi. A great suppressive effect on R. solani growth was observed in the inoculation test of plants using cucumber and chin-geng-sai. In addition, infection of Bipolaris oryzae also could be suppressed in the detached leaf assay using oats. As a result of genetic analysis, it was shown that KT was a species closely related to Streptomyces lavenduligriseus NRRL B-3173T. However, as far as we know, there is no report for biological control agents using S. lavenduligriseus. This study suggests that the strain KT may useful as biological control agents to suppress various crop diseases.

scholarly journals Discovery and Characterization of Low-Molecular Weight Inhibitors of Erwinia tracheiphila

2020 ◽  
Vol 110 (5) ◽  
pp. 989-998
Author(s):  
Cláudio M. Vrisman ◽  
Loïc Deblais ◽  
Yosra A. Helmy ◽  
Reed Johnson ◽  
Gireesh Rajashekara ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
High Throughput Screening ◽  
Pathogenic Bacteria ◽  
Bacterial Species ◽  
Bacillus Species ◽  
Erwinia Tracheiphila ◽  
Static Activity ◽  
Low Toxicity

Plant pathogenic bacteria in the genus Erwinia cause economically important diseases, including bacterial wilt of cucurbits caused by Erwinia tracheiphila. Conventional bactericides are insufficient to control this disease. Using high-throughput screening, 464 small molecules (SMs) with either cidal or static activity at 100 µM against a cucumber strain of E. tracheiphila were identified. Among them, 20 SMs (SM1 to SM20), composed of nine distinct chemical moiety structures, were cidal to multiple E. tracheiphila strains at 100 µM. These lead SMs had low toxicity to human cells and honey bees at 100 µM. No phytotoxicity was observed on melon plants at 100 µM, except when SM12 was either mixed with Silwet L-77 and foliar sprayed or when delivered through the roots. Lead SMs did not inhibit the growth of beneficial Pseudomonas and Enterobacter species but inhibited the growth of Bacillus species. Nineteen SMs were cidal to Xanthomonas cucurbitae and showed >50% growth inhibition against Pseudomonas syringae pv. lachrymans. In addition, 19 SMs were cidal or static against Erwinia amylovora in vitro. Five SMs demonstrated potential to suppress E. tracheiphila when foliar sprayed on melon plants at 2× the minimum bactericidal concentration. Thirteen SMs reduced Et load in melon plants when delivered via roots. Temperature and light did not affect the activity of SMs. In vitro cidal activity was observed after 3 to 10 h of exposure to these five SMs. Here, we report 19 SMs that provide chemical scaffolds for future development of bactericides against plant pathogenic bacterial species.

scholarly journals Evaluation of in vitro antagonistic activity of fungi from peatlands against Ganoderma species under acidic condition

2020 ◽  
Vol 21 (7) ◽  
Author(s):  
SUPRIYANTO ◽  
PURWANTO ◽  
S.H. POROMARTO ◽  
SUPYANI
Keyword(s):  
Biological Control ◽  
Antagonistic Activity ◽  
Biological Control Agents ◽  
Antagonistic Fungi ◽  
High Incidence ◽  
Acidic Conditions ◽  
Mineral Soils ◽  
Ph Range ◽  
Biological Methods

Abstract. Supriyanto, Purwanto, Poromarto SH, Supyani. 2020. Evaluation of in vitro antagonistic activity of fungi from peatlands against Ganoderma species under acidic conditions. Biodiversitas 21: 2935-2945. The use of peatlands is a significant contributor to the world’s palm oil production. A serious problem of oil palm plantations in peatlands is the high incidence of basal stem rot (BSR) disease caused by Ganoderma, which has a higher attack rate than on mineral soils. There is no effective way to control Ganoderma in peatlands. At present, the effort for the same focuses on environment-friendly biological methods; however, this is constrained by the unavailability of appropriate biological agents for peatlands. The development of biological control agents for peatlands is hampered by limited data on biological control of Ganoderma in peatlands. This research was conducted to evaluate the in vitro antagonistic activity of fungi isolated from a peatland in acidic pH conditions. Twenty-seven Ganoderma-antagonistic fungi from peatland were evaluated for their activity and their ability to antagonism in vitro within a pH range of 2-7. The results show that most antagonistic fungi from peatland, based on biomass weight, the sporulation ability, and germination of conidium, were able to grow optimally at pH 3.0-4.0, indicating that most of the Ganoderma-antagonistic fungi from peatland can be used as biological control agents for BSR on oil palms in peatlands.

scholarly journals Evaluation of Antibacterial Activity of Some Traditionally Used Medicinal Plants against Human Pathogenic Bacteria

2015 ◽  
Vol 2015 ◽  
pp. 1-6 ◽  
Author(s):  
Bishnu P. Marasini ◽  
Pankaj Baral ◽  
Pratibha Aryal ◽  
Kashi R. Ghimire ◽  
Sanjiv Neupane ◽  
...  
Keyword(s):  
Antibacterial Activity ◽  
Medicinal Plants ◽  
Inhibitory Action ◽  
Pathogenic Bacteria ◽  
Cynodon Dactylon ◽  
Bacterial Species ◽  
Dilution Method ◽  
Chloroform Fraction ◽  
Ethanolic Extracts

The worldwide increase of multidrug resistance in both community- and health-care associated bacterial infections has impaired the current antimicrobial therapy, warranting the search for other alternatives. We aimed to find thein vitroantibacterial activity of ethanolic extracts of 16 different traditionally used medicinal plants of Nepal against 13 clinical and 2 reference bacterial species using microbroth dilution method. The evaluated plants species were found to exert a range ofin vitrogrowth inhibitory action against the tested bacterial species, andCynodon dactylonwas found to exhibit moderate inhibitory action against 13 bacterial species including methicillin-resistantStaphylococcus aureus, imipenem-resistantPseudomonas aeruginosa, multidrug-resistantSalmonella typhi, andS. typhimurium. The minimum inhibitory concentration (MIC) values of tested ethanolic extracts were found from 31 to >25,000 μg/mL. Notably, ethanolic extracts ofCinnamomum camphora, Curculigo orchioides, andCurcuma longaexhibited the highest antibacterial activity againstS. pyogeneswith a MIC of 49, 49, and 195 μg/mL, respectively; whereas chloroform fraction ofCynodon dactylonexhibited best antibacterial activity againstS. aureuswith a MIC of 31 μg/mL. Among all,C. dactylon, C. camphora, C. orchioides, andC. longaplant extracts displayed a potential antibacterial activity of MIC < 100 μg/mL.

The in vitro inhibition of Phytophthora clandestina by some rhizobia and the possible role of Rhizobium trifolii in biological control of Phytophthora root rot of subterranean clover

1999 ◽  
Vol 50 (8) ◽  
pp. 1469 ◽  
Author(s):  
S. Simpfendorfer ◽  
T. J. Harden ◽  
G. M. Murray
Keyword(s):  
Biological Control ◽  
Root Rot ◽  
Subterranean Clover ◽  
Trifolium Subterraneum ◽  
Root Disease ◽  
Rhizobium Trifolii ◽  
Biological Control Agents ◽  
Control Activity ◽  
Phytophthora Root Rot

The interaction between 29 isolates of Rhizobium and the in vitro growth of 3 strains of Phytophthora clandestina was investigated to determine the potential of these bacteria as biological control agents against root rot of subterranean clover (Trifolium subterraneum L.). The biological control activity of Rhizobium on the severity of root disease in seedlings was also investigated under glasshouse conditions. Thirteen of the 29 Rhizobium isolates caused significant reductions in the hyphal growth of the 3 P. clandestina isolates examined. Inoculation of seedlings with Rhizobium trifolii reduced the severity of root disease by 14–58% with corresponding increases in dry matter production of 20–73%. These results indicate that Rhizobium species have potential as biological control agents against the root rot of T. subterraneum seedlings caused by P. clandestina.

scholarly journals Screening of wheat endophytes as biological control agents against Fusarium head blight using two different in vitro tests

2017 ◽  
Vol 202 ◽  
pp. 11-20 ◽  
Author(s):  
Morgane Comby ◽  
Marie Gacoin ◽  
Mathilde Robineau ◽  
Fanja Rabenoelina ◽  
Sébastien Ptas ◽  
...  
Keyword(s):  
Biological Control ◽  
Fusarium Head Blight ◽  
In Vitro Tests ◽  
Biological Control Agents ◽  
Head Blight

scholarly journals In vitro Antibacterial Activity and Phytochemical Analysis of Nicotiana tabacum L. Extracted in Different Organic Solvents

2017 ◽  
Vol 11 (1) ◽  
pp. 352-359 ◽  
Author(s):  
Gemechu Ameya ◽  
Aseer Manilal ◽  
Behailu Merdekios
Keyword(s):  
Nicotiana Tabacum ◽  
Medicinal Plants ◽  
Ethyl Acetate ◽  
Organic Solvents ◽  
Ethyl Acetate Extract ◽  
Antimicrobial Activities ◽  
Modern Medicine ◽  
Phytochemical Analysis ◽  
Human Pathogens

Background: Controlling infectious disease using medicinal plants is the oldest healthcare known to mankind. Regardless of the enormous advances observed in modern medicine, medicinal plants are still playing vital roles. However, only a small proportion of medicinal plants are examined for bioactive compounds which may vary in different factors. This study aimed to evaluate phytochemical constituent and antimicrobial activities of Nicotiana tabacum L. extracted by different solvents against three set of bacteria. Methods: Nicotiana tabacum L. was collected from the Western Ethiopia and extracted in seven organic solvents. An in-vitro anti-bacterial activity of plant extracts was carried out by agar well diffusion assay against microbial type culture collection of human pathogens, clinical bacterial isolates, and biofilm forming bacteria. Gas Chromatographic and Mass Spectroscopic (GC-MS) analysis was used to determine the phytochemical constituents. Results: Antimicrobial activities of plant extract vary by extraction solvents; and ethyl acetate based extracts showed better antimicrobial activities. Of the experimental organisms, biofilm forming uropathogens were the most sensitive while clinical isolates were quite resistant. Analysis of the active ethyl acetate extract by GC-MS evinced a mixture of five volatile compounds; and Pyridine, 3-(1-methyl-2-pyrrolidinyl)-, (S) was the major compound detected. The overall results of the present study revealed that N. tabacum L extract has high antimicrobial activities against biofilm forming uropathogens. Conclusion: High antimicrobial activity was observed in ethyl acetate extract of N. tabacum against the biofilm forming bacteria whereas the clinically isolated bacteria were the most resistant group. The antibacterial property demonstrated could be due to Pyridine, 3-(1-methyl-2-pyrrolidinyl)-(S) with a broad spectrum of activity.

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