Electron density, disorder and polymorphism: high-resolution diffraction studies of the highly polymorphic neuralgic drug carbamazepine

Author(s):  
Ioana Sovago ◽  
Matthias J. Gutmann ◽  
Hans Martin Senn ◽  
Lynne H. Thomas ◽  
Chick C. Wilson ◽  
...  

Analysis of neutron and high-resolution X-ray diffraction data on form (III) of carbamazepine at 100 K using the atoms in molecules (AIM) topological approach afforded excellent agreement between the experimental results and theoretical densities from the optimized gas-phase structure and from multipole modelling of static theoretical structure factors. The charge density analysis provides experimental confirmation of the partially localized π-bonding suggested by the conventional structural formula, but the evidence for any significant C—N π bonding is not strong. Hirshfeld atom refinement (HAR) gives H atom positional and anisotropic displacement parameters that agree very well with the neutron parameters. X-ray and neutron diffraction data on the dihydrate of carbemazepine strongly indicate a disordered orthorhombic crystal structure in the space groupCmca, rather than a monoclinic crystal structure in space groupP21/c. This disorder in the dihydrate structure has implications for both experimental and theoretical studies of polymorphism.

Crystals ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 172
Author(s):  
Kirill Shubin ◽  
Agris Bērziņš ◽  
Sergey Belyakov

New pseudopolymorphs of ivermectin (IVM), a potential anti-COVID-19 drug, were prepared. The crystal structure for three pseudopolymorphic crystalline forms of IVM has been determined using single-crystal X-ray crystallographic analysis. The molecular conformation of IVM in crystals has been compared with the conformation of isolated molecules modeled by DFT calculations. In a solvent with relatively small molecules (ethanol), IVM forms monoclinic crystal structure (space group I2), which contains two types of voids. When crystallized from solvents with larger molecules, like γ-valerolactone (GVL) and methyl tert-butyl ether (MTBE), IVM forms orthorhombic crystal structure (space group P212121). Calculations of the lattice energy indicate that interactions between IVM and solvents play a minor role; the main contribution to energy is made by the interactions between the molecules of IVM itself, which form a framework in the crystal structure. Interactions between IVM and molecules of solvents were evaluated using Hirshfeld surface analysis. Thermal analysis of the new pseudopolymorphs of IVM was performed by differential scanning calorimetry and thermogravimetric analysis.


2020 ◽  
Vol 75 (8) ◽  
pp. 765-768
Author(s):  
Bohdana Belan ◽  
Dorota Kowalska ◽  
Mariya Dzevenko ◽  
Mykola Manyako ◽  
Roman Gladyshevskii

AbstractThe crystal structure of the phase Ce5AgxGe4−x (x = 0.1−1.08) has been determined using single-crystal X-ray diffraction data for Ce5Ag0.1Ge3.9. This phase is isotypic with Sm5Ge4: space group Pnma (No. 62), Pearson code oP36, Z = 4, a = 7.9632(2), b = 15.2693(5), c = 8.0803(2) Å; R1 = 0.0261, wR2 = 0.0460, 1428 F2 values and 48 variables. The two crystallographic positions 8d and 4c show Ge/Ag mixing, leading to a slight increase in the lattice parameters as compared to those of the pure binary compound Ce5Ge4.


2016 ◽  
Vol 31 (4) ◽  
pp. 292-294 ◽  
Author(s):  
V. D. Zhuravlev ◽  
A. P. Tyutyunnik ◽  
N. I. Lobachevskaya

A polycrystalline sample of Ca4ZrGe3O12 was synthesized using the nitrate–citrate method and heated at 850–1100 °C. Structural refinement based on X-ray powder diffraction data showed that the crystal structure is of the garnet type with a cubic unit-cell parameter [a = 12.71299(3) Å] and the space group Ia$\bar 3$d. The structural formula is presented as Ca3[CaZr]octa[Ge]tetraO12.


Author(s):  
Feodor Belov ◽  
Alexander Villinger ◽  
Jan von Langermann

This article provides the first single-crystal XRD-based structure of enantiopure (R)-baclofen (form C), C10H12ClNO2, without any co-crystallized substances. In the enantiopure title compound, the molecules arrange themselves in an orthorhombic crystal structure (space group P212121). In the crystal, strong hydrogen bonds and C—H ... Cl bonds interconnect the zwitterionic molecules.


Author(s):  
Hongqiang Cui ◽  
Yongze Cao ◽  
Lei Zhang ◽  
Yuhang Zhang ◽  
Siying Ran ◽  
...  

Er3+ with different concentrations doped K2Yb(PO4)(MoO4) phosphors were prepared by a solid-state reaction method, and the layered orthorhombic crystal structure of the samples was confirmed by X-ray diffraction (XRD). Under...


1985 ◽  
Vol 40 (1) ◽  
pp. 13-18 ◽  
Author(s):  
Kay Jansen ◽  
Kurt Dehnicke ◽  
Dieter Fenske

The syntheses and IR spectra of the complexes [Mo2(O2C-Ph)4X2]2⊖ with X = N3, CI, Br and the counter ion PPh4⊕ are reported. The azido and the bromo complexes are obtained from a solution of [Mo2(O2CPh)4] with PPh4N3 in pyridine or by reaction with PPh4Br in CH2Br2, respectively. When (PPh4)2[Mo2(O2CPh)4(N3)2] is dissolved in CH2Cl2, nitrogen is evolved and the complex with X = CI is obtained. The crystal structure of (PPh4)2[Mo2(O2CPh)4Cl2] · 2CH2Cl2 was determined from X-ray diffraction data (5676 observed independent reflexions, R = 0.042). It crystallizes in the monoclinic space group P21/n with four formula units per unit cell; the lattice constants are a = 1549, b = 1400, c = 1648 pm, β = 94.6°. The centrosymmetric [Mo2(O2CPh)4Cl2]2⊖ ion has a rather short Mo-Mo bond of 213 pm, whereas the MoCl bonds are very long (288 pm)


Author(s):  
P. Bayliss ◽  
N. C. Stephenson

SummaryThe crystal structure of gersdorffite (III) has been examined with three-dimensional Weissenberg X-ray diffraction data. The unit cell is isometric with a 5·6849 ± 0·0003 Å, space group PI, and four formula units per cell. This structure has the sulphur and arsenic atoms equally distributed over the non-metal atom sites of pyrite. All atoms show significant random displacements from the ideal pyrite positions to produce triclinic symmetry, which serves to distinguish this mineral from a disordered cubic gersdorffite (II) and a partially ordered cubic gersdorffite (I). Factors responsible for the atomic distortions are discussed.


1996 ◽  
Vol 51 (5) ◽  
pp. 646-654 ◽  
Author(s):  
Ralf Czekalla ◽  
Wolfgang Jeitschko ◽  
Rolf-Dieter Hoffmann ◽  
Helmut Rabeneck

The isotypic carbides Ln4C7 (Ln = Ho, Er, Tm, Lu) were prepared by arc-melting of the elemental components, followed by annealing at 1300 °C. The positions of the metal and of some carbon atoms of the monoclinic crystal structure of LU4C7 were determined from X-ray powder data, and the last carbon positions were found and refined from neutron powder diffraction data: P21/c, a = 360.4(1), b = 1351.4(3), c = 629.0(2) pm, β = 104.97(2)°, Z = 2, R = 0.026 for 429 structure factors and 15 positional parameters. The structure contains isolated carbon atoms with octahedral lutetium coordination and linear C3-units, with C-C bond lengths of 132(1) and 135(1) pm. This carbide may therefore be considered as derived from methane and propadiene. The hydrolysis of LU4C7 with distilled water yields mainly methane and propine, while the hydrolyses of the corresponding holmium and erbium carbides resulted in relatively large amounts of saturated and unsaturated C2-hydrocarbons in addition to the expected products methane and propine. The structure comprises two-dimensionally infinite NaCl-type building elements, which are separated by the C3-units. It may be described as a stacking variant of a previously reported structure of HO4C7, now designated as the a-modification. The Lu4C7-type β -modification was obtained at higher temperatures. Its structure was refined by the Rietveld method from X-ray powder data to a residual R = 0.037 for 320 F values and 15 positional parameters. Lu4C7 is Pauli paramagnetic; β -HO4C7 and Er4C7 show Curie-Weiss behavior with magnetic ordering temperatures of less than 20 K.


2006 ◽  
Vol 62 (5) ◽  
pp. m1077-m1078
Author(s):  
Yuko Ohuchi ◽  
Kyoko Noda ◽  
Takayoshi Suzuki ◽  
Kazuo Kashiwabara ◽  
Hideo D. Takagi

In the monoclinic crystal structure of the title compound, trans-[Ru(C3H5OS2)2(C18H15P)2]PF6·H2O, the structure of the RuIII complex cation is very similar to that in the orthorhombic crystal of the nonhydrated complex [Noda, Ohuchi, Hashimoto, Fujiki, Itoh, Iwatsuki, Noda, Suzuki, Kashiwabara & Takagi (2006), Inorg. Chem. 45, 1349–1355]. In the present crystal structure, the P—Ru—P bond axes of the complex cations are aligned parallel to the [101] direction.


2018 ◽  
Vol 33 (3) ◽  
pp. 246-255
Author(s):  
V.D. Zhuravlev ◽  
A.P. Tyutyunnik ◽  
A.Yu. Chufarov ◽  
N.I. Lobachevskaja ◽  
Yu. A. Velikodnyi ◽  
...  

The crystal structures of Ca1.5Mn0.5V2O7 (I) and Ca1.5Cd0.5V2O7 (II) synthesized by the citrate method and by a conventional solid-state reaction, respectively, were determined using X-ray powder diffraction data. It was found that the compound I has a monoclinic crystal structure a = 4.88563(9) Å, b = 11.21279(22) Å, c = 5.69643(11 Å), β = 96.376(7)°, V = 310.132(10) Å3 (space group P21/c), Z = 2). Compound I has a narrow homogeneity region Ca1.5±0.1Mn0.5±0.1V2O7. The vanadate Ca1.5Cd0.5V2O7 crystallizes in the triclinic system with the parameters a = 6.66139(6) Å, b = 6.93019(7) Å, c = 7.02211(6) Å, α = 85.4404(9)°, β = 63.7505(7)°, γ = 82.5515(10)° и V = 288.201(5) Å3 (space group P$\bar 1$, Z = 2). It is one of the formulations of the primary solid solution, formed as a result of the substitution of part of the calcium cations for cadmium cations in Ca2V2O7.


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