scholarly journals Proteomic analysis of stress-related proteins and metabolic pathways inPicea asperatasomatic embryos during partial desiccation

2016 ◽  
Vol 15 (1) ◽  
pp. 27-38 ◽  
Author(s):  
Danlong Jing ◽  
Jianwei Zhang ◽  
Yan Xia ◽  
Lisheng Kong ◽  
Fangqun OuYang ◽  
...  
Separations ◽  
2021 ◽  
Vol 8 (4) ◽  
pp. 53
Author(s):  
Clarissa Braccia ◽  
Bhakti Prinsi ◽  
Mara Colzani ◽  
Alessandra A. Altomare ◽  
Luca Espen ◽  
...  

The benefits of ginseng have been mainly attributed to its triterpenoids, called ginsenosides. Recent genome sequencing of the Panax ginseng has paved the way for in-depth proteomic studies of this medicinal plant. The current study was conducted to deepen the proteomic information on the root proteome of Korean ginseng. Proteomic workflow was optimized by testing two different strategies, characterized by the phenol extraction procedure, the presence or the absence of SDS-PAGE fractionation step, and nano-scale liquid chromatographic tandem mass spectrometry (nLC-MS/MS) analysis. The results highlighted an evident improvement of proteome extraction by the combination of phenol extraction with SDS-PAGE before the nLC-MS/MS analysis. In addition, a dramatic impact of the steaming process (the treatment to produce red ginseng from ginseng) on protein properties was observed. Overall, the analyses of Korean ginseng permitted the characterization of a total of 2412 proteins. A large number of identified proteins belonged to the functional categories of protein and carbon/energy metabolism (22.4% and 14.6%, respectively). The primary and secondary metabolisms are major metabolic pathways, which emerged from the proteomic analysis. In addition, a large number of proteins known to play an important role in response to (a)biotic stresses were also identified. The current proteomic study not only confirmed the previous transcriptomic and proteomic reports but also extended proteomic information, including the main metabolic pathways involved in Korean ginseng.


2008 ◽  
Vol 30 (6) ◽  
pp. 613-622 ◽  
Author(s):  
Guofeng Yang ◽  
Luning Wang ◽  
Mingwei Zhu ◽  
Dan Xu

2013 ◽  
Vol 13 (1) ◽  
pp. 24 ◽  
Author(s):  
Bertrand Delaunois ◽  
Thomas Colby ◽  
Nicolas Belloy ◽  
Alexandra Conreux ◽  
Anne Harzen ◽  
...  

2003 ◽  
Vol 62 (8) ◽  
pp. 855-862 ◽  
Author(s):  
Ping-Pin Zheng ◽  
Theo M. Luider ◽  
Rob Pieters ◽  
Cees J.J. Avezaat ◽  
Martin J. van den Bent ◽  
...  

2018 ◽  
Vol 19 (12) ◽  
pp. 4020 ◽  
Author(s):  
Xinbo Wang ◽  
Yanhua Xu ◽  
Jingjing Li ◽  
Yongzhe Ren ◽  
Zhiqiang Wang ◽  
...  

Drought is a major adversity that limits crop yields. Further exploration of wheat drought tolerance-related genes is critical for the genetic improvement of drought tolerance in this crop. Here, comparative proteomic analysis of two wheat varieties, XN979 and LA379, with contrasting drought tolerance was conducted to screen for drought tolerance-related proteins/genes. Virus-induced gene silencing (VIGS) technology was used to verify the functions of candidate proteins. A total of 335 differentially abundant proteins (DAPs) were exclusively identified in the drought-tolerant variety XN979. Most DAPs were mainly involved in photosynthesis, carbon fixation, glyoxylate and dicarboxylate metabolism, and several other pathways. Two DAPs (W5DYH0 and W5ERN8), dubbed TaDrSR1 and TaDrSR2, respectively, were selected for further functional analysis using VIGS. The relative electrolyte leakage rate and malonaldehyde content increased significantly, while the relative water content and proline content significantly decreased in the TaDrSR1- and TaDrSR2-knock-down plants compared to that in non-knocked-down plants under drought stress conditions. TaDrSR1- and TaDrSR2-knock-down plants exhibited more severe drooping and wilting phenotypes than non-knocked-down plants under drought stress conditions, suggesting that the former were more sensitive to drought stress. These results indicate that TaDrSR1 and TaDrSR2 potentially play vital roles in conferring drought tolerance in common wheat.


2009 ◽  
Vol 47 (8) ◽  
pp. 1841-1847 ◽  
Author(s):  
Chao Ma ◽  
Qing-Xi Yue ◽  
Shu-Hong Guan ◽  
Wan-Ying Wu ◽  
Min Yang ◽  
...  

PROTEOMICS ◽  
2008 ◽  
Vol 8 (8) ◽  
pp. 1706-1719 ◽  
Author(s):  
Hiroki Fujisawa ◽  
Ritsuko Ohtani-Kaneko ◽  
Mitsuru Naiki ◽  
Tomoyuki Okada ◽  
Kayo Masuko ◽  
...  

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