scholarly journals Complete Genome Sequence of Senecavirus A Strain SVV HN16 Identified in China

2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Tianxia Luo ◽  
Shuaifei Xu ◽  
Jingfeng Xiong ◽  
Danping Su ◽  
Dongsheng He
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Complete Genome Sequencing

ABSTRACT A virus that caused blisters and ulcers in pigs in China was detected to be a strain of Senecavirus A (SVA). Complete genome sequencing and analysis results showed that the isolate shares 93.8% to 99.1% identity with other isolates that have been reported, proving that a new isolate of SVA was found in China.

scholarly journals Complete Genome Sequencing of Mycoplasma synoviae Strain HN01, Isolated from Chicken in Henan Province, China

2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Bin Xu ◽  
Rui Liu ◽  
Lihan Tao ◽  
Meijuan Ding ◽  
Fengying Lu ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Henan Province ◽  
Epidemic Strain ◽  
Mycoplasma Synoviae ◽  
Content Type ◽  
Complete Genome Sequencing

Here, we report the complete genome sequence of Mycoplasma synoviae HN01, a virulent epidemic strain isolated from a sick chicken with synovitis in Henan Province, China. HN01 is the Asian source of an M. synoviae strain that is completely sequenced, genome annotated, and published with relevant data.

scholarly journals Complete Genome Sequence of Caballeronia sp. Strain NK8 (MAFF311271), a Chlorobenzoate-Degrading Bacterium

2021 ◽  
Vol 10 (31) ◽  
Author(s):  
Kimiko Yamamoto-Tamura ◽  
Ryota Moriuchi ◽  
Naoto Ogawa
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Degradation Products ◽  
Complete Genome Sequencing ◽  
Degrading Bacterium

Caballeronia sp. strain NK8 grows on 3-chlorobenzoate and shows chemotaxis toward 3-chlorobenzoate and its degradation products, such as chlorocatechols. Complete genome sequencing revealed a 9.2-Mb genome consisting of three chromosomes and four plasmids. The genes for degradation of chlorobenzoate and chlorocatechols were located on plasmids pNK81 and pNK84, respectively.

scholarly journals Complete Genome Sequencing of Elizabethkingia sp. Strain 2-6

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
Kuan-Ming Liu ◽  
Hui-Lan Chang ◽  
Ming-Hong Hsu ◽  
Yi-Zhen Lin ◽  
Yu-Lin Lee ◽  
...  
Keyword(s):  
Intensive Care Unit ◽  
Intensive Care ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Relatedness ◽  
Medical Center ◽  
Content Type ◽  
Complete Genome Sequencing

Elizabethkingia sp. strain 2-6 was collected from a water faucet in the intensive care unit of a medical center in Taiwan. The complete genome sequence and annotation are reported. Analysis of the genetic relatedness to the known Elizabethkingia genomes indicated that strain 2-6 may be a new genomospecies of Elizabethkingia.

scholarly journals Complete Genome Sequencing of Thermus thermophilus Strain HC11, Isolated from Mine Geyser in Japan

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Kentaro Miyazaki
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Thermus Thermophilus ◽  
Average Nucleotide Identity ◽  
Content Type ◽  
Complete Genome Sequencing ◽  
Genetic Rearrangements

Thermus thermophilus strain HC11 was isolated from Mine Geyser in Japan, where type strain HB8 was isolated 50 years ago. In this article, the complete genome sequence of HC11 is presented. HC11 shares the highest average nucleotide identity with HB8 among known T. thermophilus genomes (93.1%) with no genetic rearrangements.

scholarly journals Complete Genome Sequence of Lactobacillus plantarum JDM1

2009 ◽  
Vol 191 (15) ◽  
pp. 5020-5021 ◽  
Author(s):  
Zhuo-Yang Zhang ◽  
Chang Liu ◽  
Yong-Zhang Zhu ◽  
Yi Zhong ◽  
Yong-Qiang Zhu ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Lactobacillus Plantarum ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Probiotic Strain ◽  
Complete Genome Sequencing ◽  
Safety And Stability

ABSTRACT Lactobacillus plantarum is a lactic acid bacterium (LAB) species commonly used as a probiotic. We have sequenced the genome of Lactobacillus plantarum JDM1, which is a Chinese commercial LAB with several probiotic functions, using a GS 20 system. We recommend that each commercial probiotic strain should undergo complete genome sequencing to ensure safety and stability.

scholarly journals Complete Genome Sequence of the Gut Commensal and Laboratory Strain Enterococcus faecium 64/3

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Jennifer K. Bender ◽  
Stefan Fiedler ◽  
Ingo Klare ◽  
Guido Werner
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Enterococcus Faecium ◽  
Complete Genome ◽  
Laboratory Strain ◽  
Whole Genome ◽  
Coding Sequences

The genome sequence of the commensal and widely used laboratory strain Enterococcus faecium 64/3 was resolved by means of PacificBioscience and Illumina whole-genome sequencing. The genome comprises 2,575,333 bp with 2,382 coding sequences as assigned by NCBI.

scholarly journals Genome Sequencing of a Novel Coronavirus SARS-CoV-2 Isolate from Iraq

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Nihad A. M. Al-Rashedi ◽  
Danilo Licastro ◽  
Sreejith Rajasekharan ◽  
Simeone Dal Monego ◽  
Alessandro Marcello ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Miseq ◽  
Spike Protein ◽  
Protein Coding ◽  
Novel Coronavirus ◽  
First Time

ABSTRACT The coding-complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an Iraqi patient was sequenced for the first-time using Illumina MiSeq technology. There was a D614G mutation in the spike protein-coding sequence. This report is valuable for better understanding the spread of the virus in Iraq.

scholarly journals Inhangapi Virus: Genome Sequencing of a Brazilian Ungrouped Rhabdovirus Isolated in the Amazon Region

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Ana Lucia M. Wanzeller ◽  
Márcio R. T. Nunes ◽  
Fernando N. Tavares ◽  
Walber V. M. Pinto ◽  
Edivaldo C. Júnior ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Genome ◽  
Amazon Region ◽  
W State ◽  
The Family

We report here nearly complete genome sequence of Inhangapi virus (INHV) strain BEAR177325, which was isolated from a pool of sandflies ( Lutzomyia flaviscutellata ) in the Utinga neighborhood, Belém (01º28´S 48°27′W), State of Pará, Brazil, in 1969. The genome of this virus showed similarity with members belonging to the family Rhabdoviridae .

scholarly journals Complete Genome Sequence of a New Megavirus Family Member Isolated from an Inland Water Lake for the First Time in India

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Anirvan Chatterjee ◽  
Farhan Ali ◽  
Disha Bange ◽  
Kiran Kondabagil
Keyword(s):  
Family Member ◽  
Genome Size ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Dna Virus ◽  
Double Stranded Dna ◽  
Water Lake ◽  
First Time

We report here the isolation and complete genome sequencing of a large double-stranded DNA virus, Powai Lake megavirus, for the first time from India. The isolation of a large DNA virus with genome size >1 Mb from India further attests to the prevalence of Giant viruses in different environmental niches.

scholarly journals Complete Genome Sequencing of Mycobacterium heckeshornense Strain JMUB5695, Isolated from Necrotizing Granulomatous Lesions

2021 ◽  
Vol 10 (27) ◽  
Author(s):  
Katsuyuki Katahira ◽  
Shinya Watanabe ◽  
Kentaro Wakamatsu ◽  
Zenzo Nagasawa ◽  
Masayuki Kawasaki ◽  
...  
Keyword(s):  
Lung Cancer ◽  
Cancer Patient ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lung Cancer Patient ◽  
Gc Content ◽  
Content Type ◽  
Granulomatous Lesions

We report the complete genome sequence of Mycobacterium heckeshornense strain JMUB5695, which was isolated from necrotizing granulomatous lesions in a lung cancer patient. The complete genome consists of a 4,865,109-bp chromosome with a GC content of 65.9% and contains no plasmids.

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