scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain In5 Isolated from a Greenlandic Disease Suppressive Soil with Potent Antimicrobial Activity

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Rosanna C. Hennessy ◽  
Mikkel A. Glaring ◽  
Charlotte F. Michelsen ◽  
Stefan Olsson ◽  
Peter Stougaard
Keyword(s):  
Antimicrobial Activity ◽  
Antifungal Activity ◽  
Gene Cluster ◽  
Genome Sequence ◽  
Draft Genome ◽  
Pseudomonas Sp ◽  
Suppressive Soil ◽  
Peptide Synthetases ◽  
Disease Suppressive Soil ◽  
Insight Into

Pseudomonas sp. In5 is an isolate of disease suppressive soil with potent activity against pathogens. Its antifungal activity has been linked to a gene cluster encoding nonribosomal peptide synthetases producing the peptides nunamycin and nunapeptin. The genome sequence will provide insight into the genetics behind the antimicrobial activity of this strain.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain CES, Containing the Entire Alkylxanthine Gene Cluster for Caffeine Breakdown

2020 ◽  
Vol 9 (28) ◽  
Author(s):  
Ryan M. Summers ◽  
Jonathan Shao ◽  
Meredith B. Mock ◽  
Chi Li Yu ◽  
Fernando E. Vega
Keyword(s):  
Nucleotide Sequence ◽  
Gene Cluster ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Protein Coding ◽  
Coding Regions ◽  
Demethylation Pathway

ABSTRACT Pseudomonas strain CES was isolated from caffeine-enriched soil and found to possess the N-demethylation pathway for caffeine breakdown. We report the nucleotide sequence of the draft genome with 5,827,822 bp, 62.6% G+C content, and 5,427 protein-coding regions.

scholarly journals Draft Genome Sequence of Carbaryl-Degrading Soil Isolate Pseudomonas sp. Strain C5pp

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Vikas D. Trivedi ◽  
Pramod Kumar Jangir ◽  
Rakesh Sharma ◽  
Prashant S. Phale
Keyword(s):  
Genome Sequence ◽  
Metal Tolerance ◽  
Draft Genome ◽  
Heavy Metal Tolerance ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Soil Isolate ◽  
Genes Encoding ◽  
Evolutionary Aspects ◽  
Insight Into

We report the draft genome sequence of carbaryl-degrading Pseudomonas sp. strain C5pp. Genes encoding salicylate and gentisate metabolism, large amounts of oxygenase, nitrogen metabolism, and heavy metal tolerance were identified. The sequence will provide further insight into the biochemical and evolutionary aspects of carbaryl degradation.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain FEN, Isolated from the Fe- and Organic Matter-Rich Schlöppnerbrunnen Fen

2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Rebecca E. Cooper ◽  
Carl-Eric Wegner ◽  
Kirsten Küsel
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Genome Sequence ◽  
Iron Uptake ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Siderophore Biosynthesis ◽  
High Concentrations ◽  
Insight Into

ABSTRACT Here, we report the draft genome sequence of Pseudomonas sp. strain FEN, a nonfluorescent siderophore producer that was isolated from the Schlöppnerbrunnen fen, which is characterized by high concentrations of Fe, dissolved organic matter (DOM), and Fe-DOM complexes. This draft genome sequence provides insight into the mechanisms of siderophore biosynthesis and siderophore-mediated iron uptake by this bacterium.

scholarly journals Draft Genome Sequence of the Novonestmycin-Producing Strain Streptomyces sp. Z26, Isolated from Potato Rhizosphere in Morocco

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Anina Buchmann ◽  
Carolina Cano-Prieto ◽  
Ahmed Nafis ◽  
Mustapha Barakate ◽  
Mohamed Baz ◽  
...  
Keyword(s):  
Antifungal Activity ◽  
Secondary Metabolites ◽  
Gene Cluster ◽  
Draft Genome ◽  
Production Capacity ◽  
Biosynthetic Gene Cluster ◽  
Biosynthetic Gene ◽  
Content Type ◽  
Streptomyces Sp ◽  
Insight Into

Streptomyces sp. strain Z26 exhibited antifungal activity and turned out to be a producer of the secondary metabolites novonestmycin A and B. The 6.5-Mb draft genome gives insight into the complete secondary metabolite production capacity and builds the basis to find and locate the biosynthetic gene cluster encoding the novonestmycins.

scholarly journals Draft Genome Sequence of Lipopeptide-Producing Strain Pseudomonas fluorescens DSM 11579 and Comparative Genomics with Pseudomonas sp. Strain SH-C52, a Closely Related Lipopeptide-Producing Strain

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Norbert Kirchner ◽  
Carolina Cano-Prieto ◽  
Menno van der Voort ◽  
Jos M. Raaijmakers ◽  
Harald Gross
Keyword(s):  
Comparative Genomics ◽  
Comparative Study ◽  
Pseudomonas Fluorescens ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Production Capacity ◽  
Pseudomonas Sp ◽  
Content Type ◽  
Insight Into

ABSTRACT Pseudomonas fluorescens DSM 11579 is known to be a producer of the lipopeptides brabantamide and thanamycin. Its draft genome gives insight into the complete secondary metabolite production capacity of the strain and builds the basis for a comparative study with Pseudomonas sp. strain SH-C52, a lipopeptide-producing strain involved in natural disease-suppressive soils.

scholarly journals Draft Genome Sequence of Cyclic Lipopeptide Producer Pseudomonas sp. Strain SWRI103, Isolated from Wheat Rhizosphere

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Samira Zarvandi ◽  
Tahereh Bahrami ◽  
Brent Pauwels ◽  
Ahmad Asgharzadeh ◽  
Mehdi Hosseini-Mazinani ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Carotenoid Biosynthesis ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Nonribosomal Peptide ◽  
Peptide Synthetases ◽  
Wheat Rhizosphere ◽  
Cyclic Lipopeptide

ABSTRACT The draft genome sequence of wheat rhizosphere isolate Pseudomonas sp. strain SWRI103 is reported. This strain carries several gene clusters encoding nonribosomal peptide synthetases (NRPSs), including a system for cyclic lipopeptide (CLP) production, and genes for carotenoid biosynthesis.

scholarly journals Draft Genome Sequence of the Putative Marine Pathogen Aquimarina sp. Strain I32.4

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Hilary J. Ranson ◽  
Jason LaPorte ◽  
Edward Spinard ◽  
Andrei Y. Chistoserdov ◽  
Marta Gomez-Chiarri ◽  
...  
Keyword(s):  
Virulence Factors ◽  
Genome Sequence ◽  
Draft Genome ◽  
Homarus Americanus ◽  
Draft Genome Sequence ◽  
American Lobster ◽  
Content Type ◽  
Shell Disease ◽  
Insight Into

ABSTRACT Aquimarina sp. strain I32.4 (formerly Aquimarina sp. ‘ homaria ’) is a putative pathogen involved in epizootic shell disease in the American lobster ( Homarus americanus ). We report here the draft genome sequence for Aquimarina sp. strain I32.4 and describe virulence factors that may provide insight into its mechanism of pathogenicity.

scholarly journals Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Qihui Hou ◽  
Chengqiang Wang ◽  
Xiaoyang Hou ◽  
Zhilin Xia ◽  
Jiangping Ye ◽  
...  
Keyword(s):  
Antimicrobial Activity ◽  
Plant Growth ◽  
Genome Sequence ◽  
Broad Spectrum ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Functional Genes ◽  
Plant Growth Promoting ◽  
Brevibacillus Brevis ◽  
Growth Promoting

Brevibacillus brevis DZQ7 is a plant growth-promoting rhizobacterium (PGPR) isolated from tobacco rhizosphere. Here, we report the draft genome sequence of B. brevis DZQ7. Several functional genes related to antimicrobial activity were identified in the genome.

scholarly journals Draft Genome Sequence of “ Candidatus Phytoplasma oryzae” Strain Mbita1, the Causative Agent of Napier Grass Stunt Disease in Kenya

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Anne Fischer ◽  
Ivette Santana-Cruz ◽  
Lillian Wambua ◽  
Cassandra Olds ◽  
Charles Midega ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Agricultural Production ◽  
Plant Pathogens ◽  
Genomic Organization ◽  
Draft Genome ◽  
Napier Grass ◽  
Eastern Africa ◽  
Draft Genome Sequence ◽  
Economic Losses ◽  
Insight Into

Phytoplasmas are bacterial plant pathogens with devastating impact on agricultural production worldwide. In eastern Africa, Napier grass stunt disease causes serious economic losses in the smallholder dairy industry. This draft genome sequence of “ Candidatus Phytoplasma oryzae” strain Mbita1 provides insight into its genomic organization and the molecular basis of pathogenicity.

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