scholarly journals High-Quality Genome Sequence of Xanthomonas axonopodis pv. glycines Strain 12609 Isolated in Taiwan

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Shu-Fen Weng ◽  
An-Chi Luo ◽  
Che-Jui Lin ◽  
Tsai-Tien Tseng
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Cyclic Gmp ◽  
Genomic Sequence ◽  
Secretion Systems ◽  
High Quality ◽  
Content Type ◽  
Xanthomonas Axonopodis ◽  
Plasmid Sequence ◽  
High Quality Genome

ABSTRACT The genomic sequence was determined for Xanthomonas axonopodis pv. glycines strain 12609, isolated in Taiwan. Based on the genome sequence, we predicted the encoded genes, rRNA, tRNA, a plasmid sequence, secretion systems, cyclic GMP- and cyclic di-GMP-mediated pathways, and the gene cluster rpfABCHGDE (regulation of pathogenicity factor).

scholarly journals Complete High-Quality Genome Sequence of Clostridium limosum (Hathewaya limosa) Isolate 14S0207, Recovered from a Cow with Suspected Blackleg in Germany

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Prasad Thomas ◽  
Mostafa Y. Abdel-Glil ◽  
Anne Busch ◽  
Lothar H. Wieler ◽  
Inga Eichhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Intestinal Tract ◽  
High Quality ◽  
Circular Chromosome ◽  
Content Type ◽  
High Quality Genome

Clostridium limosum can be found in soil and the intestinal tract of animals. In 2014, C. limosum was isolated from a suspected blackleg outbreak in cattle in Schleswig-Holstein, Germany. We present a complete genome sequence of a C. limosum strain represented by a circular chromosome and three plasmids.

scholarly journals Complete Genome Sequence of the Industrial Strain Bacillus megaterium WSH-002

2011 ◽  
Vol 193 (22) ◽  
pp. 6389-6390 ◽  
Author(s):  
Liming Liu ◽  
Yang Li ◽  
Jing Zhang ◽  
Wei Zou ◽  
Zhemin Zhou ◽  
...  
Keyword(s):  
Vitamin C ◽  
Genome Sequence ◽  
Bacillus Megaterium ◽  
Complete Genome Sequence ◽  
Protein Production ◽  
Industrial Strain ◽  
High Quality ◽  
Content Type ◽  
Ketogulonicigenium Vulgare ◽  
High Quality Genome

Bacillus megaterium, an industrial strain, has been widely used in protein production and the vitamin C industry. Here we reported a finished, annotated, and compared 4.14-Mbp high-quality genome sequence ofB. megateriumWSH-002, which is the companion strain forKetogulonicigenium vulgarein the vitamin C industry and is stocked in our laboratory.

scholarly journals High-Quality Genome Sequence of Bacillus anthracis Strain 14RA5914 Isolated during an Outbreak in Germany in 2014

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Mandy C. Elschner ◽  
Anne Busch ◽  
Annette Schliephake ◽  
Wolfgang Gaede ◽  
Eric Zuchantke ◽  
...  
Keyword(s):  
Bacillus Anthracis ◽  
Genome Sequence ◽  
Notifiable Disease ◽  
High Quality ◽  
Content Type ◽  
High Quality Genome

ABSTRACT Bacillus anthracis is a zoonotic agent causing anthrax, a notifiable disease in animals. The last anthrax outbreak among cattle in Germany occurred in April 2014 in Saxony-Anhalt. Here we report a high-quality genome sequence of the Bacillus anthracis strain 14RA5914 Dobichau isolated from the spleen of a dead cow.

scholarly journals High-Quality Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Strain 160527, a Causal Agent of Panama Disease

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Shuta Asai ◽  
Yu Ayukawa ◽  
Pamela Gan ◽  
Sachiko Masuda ◽  
Ken Komatsu ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Causal Agent ◽  
High Quality ◽  
Panama Disease ◽  
Content Type ◽  
High Quality Genome

Fusarium oxysporum f. sp. cubense is the causal agent of banana Fusarium wilt, also known as Panama disease. Here, we present a high-quality genome sequence of F. oxysporum f. sp. cubense strain 160527. The genome assembly is composed of 12 contigs with a total assembly length of 51,139,495 bp (N 50 contig length, 4,884,632 bp).

scholarly journals Draft Genome Sequence of Escherichia coli XH001, a Producer of l-Threonine in Industry

2011 ◽  
Vol 193 (22) ◽  
pp. 6406-6407 ◽  
Author(s):  
Huilin Yang ◽  
Yuling Liao ◽  
Bin Wang ◽  
Ying Lin ◽  
Li Pan
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Content Type ◽  
Plasmid Sequence

l-Threonine has been widely used as a supplement in the food, pharmaceutical, and cosmetic industries. Here, we present a high-quality draft annotated genome sequence ofEscherichia coliXH001, a producer ofl-threonine in industry. Its genome and plasmid sequence will provide clues about the molecular mechanisms underlying its beneficial properties.

scholarly journals Complete Genome Sequence of Temperature-Dependent Pigment-Producing Serratia marcescens ATCC 274

2020 ◽  
Vol 9 (15) ◽  
Author(s):  
Suzuka Yabe ◽  
Jun Fukushima
Keyword(s):  
Serratia Marcescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Red Pigment ◽  
Temperature Dependent ◽  
High Quality ◽  
Content Type ◽  
Circular Genome ◽  
High Quality Genome

Serratia marcescens ATCC 274 produces the red pigment prodigiosin and the biosurfactant serrawettin W1 at 30°C but not at 37°C. A complete, high-quality genome sequence of S. marcescens ATCC 274 was obtained and found to comprise a single 5,148,533-bp circular genome with 4,799 genes.

scholarly journals High-Quality Genome Sequence of the Root-Knot Nematode Meloidogyne arenaria Genotype A2-O

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Kazuki Sato ◽  
Yasuhiro Kadota ◽  
Pamela Gan ◽  
Takahiro Bino ◽  
Taketo Uehara ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Meloidogyne Arenaria ◽  
Root Knot Nematode ◽  
High Quality ◽  
Root Knot Nematodes ◽  
Content Type ◽  
High Quality Genome

Root-knot nematodes (Meloidogyne spp.) cause serious damage to many crops globally. We report the high-quality genome sequence of Meloidogyne arenaria genotype A2-O.

scholarly journals High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Rebecca L. Lindsey ◽  
Dhwani Batra ◽  
Lori Rowe ◽  
Vladimir N. Loparev ◽  
Devon Stripling ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Resistance Gene ◽  
Genome Sequence ◽  
The United States ◽  
Whole Genome Sequence ◽  
Escherichia Coli O157 ◽  
High Quality ◽  
O157 Strain ◽  
Content Type ◽  
High Quality Genome

ABSTRACT Enterobacteriaceae carrying plasmid-mediated colistin resistance have been found around the world. We report here the high-quality whole-genome sequence of an Escherichia coli O157:H48 isolate (2016C-3936C1) from Connecticut that carried the mcr-1 resistance gene on an IncX4-type plasmid.

scholarly journals Draft Genome Sequence of Comamonas testosteroni TA441, a Bacterium That Has a Cryptic Phenol Degradation Gene Cluster

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Hiroyuki Arai ◽  
Masaharu Ishii
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Spontaneous Mutations ◽  
Content Type ◽  
Repressor Gene ◽  
Mutant Strains

Comamonas testosteroni TA441 has a complete phenol degradation gene cluster but does not degrade phenol because the cluster is tightly repressed. However, mutant strains that can degrade phenol arise by spontaneous mutations of a repressor gene during incubation with phenol. Here, we report the draft genome sequence of strain TA441.

scholarly journals Genome Sequence Resource of Magnaporthe oryzae Laboratory Strain 2539

2020 ◽  
Vol 33 (8) ◽  
pp. 1029-1031
Author(s):  
Meilian Chen ◽  
Baohua Wang ◽  
Guodong Lu ◽  
Zhenhui Zhong ◽  
Zonghua Wang
Keyword(s):  
Genome Sequence ◽  
Magnaporthe Oryzae ◽  
Genome Assembly ◽  
Laboratory Strain ◽  
Model System ◽  
Blast Disease ◽  
High Quality ◽  
Host Pathogen Interaction ◽  
Host Pathogen ◽  
High Quality Genome

Magnaporthe oryzae causes blast disease on more than 50 species of monocot plants, including important crops such as rice, millet, and most recently wheat. Additionally, it is an important model system for studying host-pathogen interaction. Here, we report a high-quality genome assembly and annotation of a laboratory strain 2539 of M. oryzae, which is a widely used progeny of a rice-infecting isolate and a grass-infecting isolate. The genome sequence of strain 2539 will be useful for studying the evolution, host adaption, and pathogenicity of M. oryzae, which will be beneficial for a better understanding of the mechanisms of host-pathogen interaction.

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