scholarly journals Draft Genome Sequence of Amphirosellinia nigrospora JS-1675, an Endophytic Fungus from Pteris cretica

2019 ◽  
Vol 8 (20) ◽  
Author(s):  
Jongbum Jeon ◽  
Sook-Young Park ◽  
Jung A. Kim ◽  
Nan Hee Yu ◽  
Ae Ran Park ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Endophytic Fungus ◽  
Pathogenic Bacteria ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Plant Pathogenic Bacteria ◽  
Pteris Cretica ◽  
Bacteria And Fungi ◽  
First Time

The fungus Amphirosellinia nigrospora strain JS-1675 has been reported to exert antimicrobial effects against various plant-pathogenic bacteria and fungi. Here, we report the draft genome sequence of A. nigrospora for the first time.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals First Draft Genome Sequence of Thermophilic Laceyella tengchongensis BKK01, Isolated from Municipal Solid Waste in Thailand

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Sirirat Wachiralurpan ◽  
Pattarawan Ruangsuj ◽  
Wariya Yamprayoonswat ◽  
Pattarawut Sopha ◽  
Watthanachai Jumpathong ◽  
...  
Keyword(s):  
Municipal Solid Waste ◽  
Solid Waste ◽  
Genome Sequence ◽  
Draft Genome ◽  
Thermophilic Bacterium ◽  
Antibiotic Activity ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Gramicidin S ◽  
Bacteria And Fungi

ABSTRACT Laceyella tengchongensis BKK01 is a thermophilic bacterium isolated from municipal solid waste. The genome of L. tengchongensis BKK01 includes a gene putatively encoding gramicidin S synthase. Gramicidin S has antibiotic activity against some bacteria and fungi. The newly sequenced 3.44-Mb draft genome of L. tengchongensis BKK01 will shed some light on the biosynthesis of gramicidin S.

scholarly journals Draft Genome Sequence of an Isolate of Extensively Drug-Resistant Mycobacterium tuberculosis from Nepal

2020 ◽  
Vol 9 (4) ◽  
Author(s):  
Sanjay S. Gautam ◽  
Kelvin W. C. Leong ◽  
Manoj Pradhan ◽  
Y. Ibotomba Singh ◽  
Sagar K. Rajbhandari ◽  
...  
Keyword(s):  
Mycobacterium Tuberculosis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Drug Resistant ◽  
Single Nucleotide ◽  
Content Type ◽  
Extensively Drug Resistant ◽  
Drug Resistant Phenotype ◽  
First Time

Extensively drug-resistant (XDR) Mycobacterium tuberculosis has become a challenge to the treatment of tuberculosis (TB) in several countries, including Nepal. Here, we report for the first time the draft genome sequence of an isolate of XDR-TB collected in Nepal and describe single-nucleotide variations associated with its extensively drug-resistant phenotype.

scholarly journals Draft Genome Sequence of Cold-Tolerant Kurthia gibsonii B83, Isolated from Spinach Leaf

2019 ◽  
Vol 8 (11) ◽  
Author(s):  
Bidhan Chandra Mukhopadhyay ◽  
Suranjita Mitra ◽  
Tawsif Ahmed Kazi ◽  
Sukhendu Mandal ◽  
Swadesh Ranjan Biswas
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Limited Information ◽  
Genome Sequences ◽  
Content Type ◽  
Cold Tolerant ◽  
Spinach Leaf ◽  
First Time

Limited information is available on the whole-genome sequences of Kurthia spp. Here, we report, for the first time, the draft genome sequence of Kurthia gibsonii designated as strain B83.

scholarly journals Draft Genome Sequence of Daldinia childiae JS-1345, an Endophytic Fungus Isolated from Stem Tissue of Korean Fir

2020 ◽  
Vol 9 (14) ◽  
Author(s):  
Jung A Kim ◽  
Jongbum Jeon ◽  
Sook-Young Park ◽  
Mi Jin Jeon ◽  
Joo-Hong Yeo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Endophytic Fungus ◽  
Draft Genome ◽  
Inflammatory Activity ◽  
Draft Genome Sequence ◽  
Stem Tissue ◽  
Content Type ◽  
Final Assembly ◽  
Abies Koreana ◽  
Korean Fir

The fungus Daldinia childiae strain JS-1345, isolated from stem tissue of Abies koreana (Korean fir), has shown strong anti-inflammatory activity. Here, we report the genome sequence of D. childiae JS-1345. The final assembly consisted of 133 scaffolds totaling 38,652,569 bp (G+C content, 44.07%).

scholarly journals Genome Sequence of an Endophytic Fungus, Fusarium solani JS-169, Which Has Antifungal Activity

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Jung A Kim ◽  
Jongbum Jeon ◽  
Sook-Young Park ◽  
Ki-Tae Kim ◽  
Gobong Choi ◽  
...  
Keyword(s):  
Antifungal Activity ◽  
Genome Sequence ◽  
Fusarium Solani ◽  
Endophytic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT An endophytic fungus, Fusarium solani strain JS-169, isolated from a mulberry twig, showed considerable antifungal activity. Here, we report the draft genome sequence of this strain. The assembly comprises 17 scaffolds, with an N 50 value of 4.93 Mb. The assembled genome was 45,813,297 bp in length, with a G+C content of 49.91%.

scholarly journals Draft Genome Sequence of Aspergillus persii NIBRFGC000004109, Which Has Antibacterial Activity against Plant-Pathogenic Bacteria

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Jung A. Kim ◽  
Jongbum Jeon ◽  
Sook-Young Park ◽  
Ki-Tae Kim ◽  
Gobong Choi ◽  
...  
Keyword(s):  
Antibacterial Activity ◽  
Genome Sequence ◽  
Pathogenic Bacteria ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Penicillic Acid ◽  
Content Type ◽  
Plant Pathogenic Bacteria ◽  
Xanthomonas Arboricola

ABSTRACT The fungus Aspergillus persii strain NIBRFGC000004109 is capable of producing penicillic acid and showed antibacterial activity against various plant-pathogenic bacteria, including Xanthomonas arboricola pv. pruni. Here, we report the first draft whole-genome sequence of A. persii. The assembly comprises 38,414,373 bp, with 12 scaffolds.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

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