scholarly journals Draft Genome Sequence of Mortierella alpina Strain LL118, Isolated from an Aspen (Populus tremuloides) Leaf Litter Sample

2021 ◽  
Vol 10 (47) ◽  
Author(s):  
Shu Yang ◽  
Boris A. Vinatzer
Keyword(s):  
Leaf Litter ◽  
Genome Sequence ◽  
Populus Tremuloides ◽  
Draft Genome ◽  
Fungal Species ◽  
Ice Nucleation ◽  
Mortierella Alpina ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Ice Nucleation Activity

Mortierella alpina is a filamentous fungus commonly associated with soil and is one of very few fungal species known to include strains with ice nucleation activity. Here, we report the draft genome sequence of the ice nucleation-active M. alpina strain LL118, isolated from aspen leaf litter collected in Alberta, Canada.

scholarly journals Draft Genome Sequence of the Aquatic Fungus Margaritispora aquatica Strain NNIBRFG339

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Jaeduk Goh ◽  
Hye Yeon Mun ◽  
Young-Hwan Park ◽  
Sangkyu Park ◽  
Yoosun Oh ◽  
...  
Keyword(s):  
Leaf Litter ◽  
Genome Sequence ◽  
Draft Genome ◽  
Fungal Species ◽  
Draft Genome Sequence ◽  
Aquatic Fungus ◽  
Content Type

Margaritispora aquatica is an aquatic fungal species found in leaf litter. Here, we report the 42.5-Mb draft genome sequence of M. aquatica strain NNIBRFG339, which comprises 61 scaffolds and has an overall G+C content of 45.77% and an N 50 value of 1.856 Mb.

scholarly journals Draft Genome Sequence of Fusarium equiseti K3, a Fungal Species Isolated from Hexachlorocyclohexane-Contaminated Soil

2021 ◽  
Vol 10 (47) ◽  
Author(s):  
Nelson Khan ◽  
Rodolfo Brizola Toscan ◽  
Accadius Lunayo ◽  
Benson Wamalwa ◽  
Edward Muge ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Contaminated Soil ◽  
Draft Genome ◽  
Fungal Species ◽  
Draft Genome Sequence ◽  
Fusarium Equiseti ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

We present the draft genome sequence of Fusarium equiseti strain K3, a fungus isolated from a hexachlorocyclohexane (HCH)-contaminated soil (Kitengela, Kenya). The 37.88-Mb draft genome sequence consists of 206 contigs, 12,311 predicted protein-coding sequences, and 261 tRNA sequences.

scholarly journals Genome Sequence of an Unclassified Pleosporales Species Isolated from Human Nasopharyngeal Aspirate

2012 ◽  
Vol 11 (6) ◽  
pp. 828-828 ◽  
Author(s):  
Kee Peng Ng ◽  
Su Mei Yew ◽  
Chai Ling Chan ◽  
Tuck Soon Soo-Hoo ◽  
Shiang Ling Na ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Gene Annotation ◽  
Draft Genome ◽  
Fungal Species ◽  
Draft Genome Sequence ◽  
Nasopharyngeal Aspirate ◽  
Content Type ◽  
Species Analysis ◽  
Secreted Proteases ◽  
Adhesive Proteins

ABSTRACTPleosporalesis the largest order in the fungal classDothideomycetes. We report the 36,814,818-bp draft genome sequence and gene annotation of UM1110, aPleosporalesisolate associated with unclassified genera that is potentially a new fungal species. Analysis of the genome sequence led to the finding of genes associated with fungal adhesive proteins, secreted proteases, allergens, and pseudohyphal development.

scholarly journals Draft Genome Sequence of the Decomposition Fungus Aquanectria penicillioides Strain NNIBRFG19

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Jaeduk Goh ◽  
Hye Yeon Mun ◽  
Yoosun Oh ◽  
Namil Chung
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Fungal Species ◽  
Draft Genome Sequence ◽  
Content Type

Aquanectria penicillioides is a common aquatic fungal species. Here, we report the 53.7-Mb draft genome sequence of A. penicillioides strain NNIBRFG19, which has an overall G+C content of 47.93%, comprising 13 scaffolds with an N 50 value of 4.932 Mb.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

scholarly journals Draft Genome Sequence of a Clinical Isolate of Streptococcus mutans Strain HM

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Yoshio Kondo ◽  
Haruka Nishimata ◽  
Kiyoshi Hidaka ◽  
Tomoyuki Hasuwa ◽  
Hiroyuki Moriuchi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Infective Endocarditis ◽  
Streptococcus Mutans ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Virulence Potential

ABSTRACT We report the draft genome sequence of Streptococcus mutans strain HM isolated from a 4-year-old girl with infective endocarditis. The genomics information will provide information on the genetic diversity and virulence potential of S. mutans strain HM.

scholarly journals Draft Genome Sequence of Enterococcus faecalis DD14, a Bacteriocinogenic Lactic Acid Bacterium with Anti-Clostridium Activity

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Yanath Belguesmia ◽  
Valérie Leclère ◽  
Matthieu Duban ◽  
Eric Auclair ◽  
Djamel Drider
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Gram Positive Bacteria ◽  
Healthy Newborn

ABSTRACT We report the draft genome sequence of Enterococcus faecalis DD14, a strain isolated from meconium of a healthy newborn at Roubaix Hospital (France). The strain displayed antagonism against a set of Gram-positive bacteria through concomitant production of lactic acid and bacteriocin. The genome has a size of 2,893,365 bp and a 37.3% G+C ratio and is predicted to contain at least 2,755 coding sequences and 62 RNAs.

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