scholarly journals Draft Genome Sequence of Streptomyces sp. Strain AM-2504, Identified by 16S rRNA Comparative Analysis as a Streptomyces kasugaensis Strain

2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Valerio Napolioni ◽  
Lucia Cimarelli ◽  
Antonino Miano ◽  
Anna La Teana ◽  
Retina Çapuni ◽  
...  
Keyword(s):  
Comparative Analysis ◽  
16S Rrna ◽  
Genome Sequence ◽  
Functional Characterization ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Sequence ◽  
16S Rrna Sequence ◽  
Content Type

We report here the draft genome sequence of Streptomyces sp. strain AM-2504, a microorganism producing a broad range of biotechnologically relevant molecules. The comparative analysis of its 16S rRNA sequence allowed the assignment of this strain to the Streptomyces kasugaensis species, thus fostering functional characterization of the secondary metabolites produced by this microorganism.

scholarly journals Draft Genome Sequence of Comamonas aquatilis Strain LK (= CSUR P6418 = CECT 9772), Isolated from the Planarian Schmidtea mediterranea

2021 ◽  
Vol 10 (5) ◽  
Author(s):  
Luis Johnson Kangale ◽  
Anthony Levasseur ◽  
Didier Raoult ◽  
Eric Ghigo ◽  
Pierre-Edouard Fournier
Keyword(s):  
16S Rrna ◽  
Genome Sequence ◽  
Type Strain ◽  
Sequence Similarity ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Schmidtea Mediterranea ◽  
Rrna Sequence ◽  
16S Rrna Sequence ◽  
Content Type

ABSTRACT Comamonas aquatilis was defined as a new Comamonas species based on its 16S rRNA sequence, but the genome from the type strain SB30-Cr27-3T (= CIP 111491T = CCM 8815T) is not available. We have cultivated from the planarian Schmidtea mediterranea a Comamonas aquatilis strain, LK (= CSUR P6418 = CECT 9772), that exhibits 100% 16S rRNA sequence similarity to strain SB30-Cr27-3T. We have sequenced the genome of strain LK and obtained a chromosome of 4,899,818 bp, with a G+C content of 61.75%, assembled into two contigs.

scholarly journals Draft Genome Sequence of Streptomyces phaeoluteigriseus DSM41896

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Jana K. Schniete ◽  
Talal S. Salih ◽  
Lis Algora-Gallardo ◽  
Tiago Santos ◽  
Sara Filgueira-Martinez ◽  
...  
Keyword(s):  
16S Rrna ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Spore Morphology ◽  
Rrna Sequence ◽  
16S Rrna Sequence ◽  
Separate Species ◽  
Content Type ◽  
Streptomyces Violaceusniger

ABSTRACT The draft genome for the type strain Streptomyces phaeoluteigriseus DSM41896 (ISP 5182) is reported. It was classified as a member of the Streptomyces violaceusniger clade; however, a polyphasic study showed it was a separate species based on its distinct spore morphology and 16S rRNA sequence. The genome sequence confirms it as a separate species.

scholarly journals Draft Genome Sequence of Psychrobacter okhotskensis Strain 5179-1A, Isolated from a Raw Cured Ham Storage Crate

2020 ◽  
Vol 9 (29) ◽  
Author(s):  
Joseph Wambui ◽  
Marina Morach ◽  
Nicole Cernela ◽  
Marc J. A. Stevens ◽  
Giovanni Ghielmetti ◽  
...  
Keyword(s):  
16S Rrna ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Rrna Sequences ◽  
16S Rrna Sequences

ABSTRACT We present the draft genome sequence of Psychrobacter okhotskensis strain 5179-1A, which was isolated from a raw cured ham storage crate. Its size and GC content are 3.4 Mb and 43.4%, respectively. The 16S rRNA sequences of strain 5179-1A and P. okhotskensis MD17T are 100% identical.

scholarly journals Draft Genome Sequence of Escherichia coli DSM 12242, a Highly Efficient Host Strain for the Isolation of Somatic Coliphages

2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Cátia Pacífico ◽  
Dmitrij Sofka ◽  
João André Carriço ◽  
Friederike Hilbert
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Host Strain ◽  
Draft Genome Sequence ◽  
Clinical Samples ◽  
Content Type ◽  
Somatic Coliphages ◽  
Commercial Strain

Here, we report the draft genome sequence and characterization of the commercial strain Escherichia coli DSM 12242 (=ATCC 13706/60 =NZRM 3262) derived from strain C (ATCC 13706), which is suitable for the isolation of coliphages from environmental and clinical samples.

scholarly journals Draft Genome Sequence of Salt-Tolerant Yeast Debaryomyces hansenii var. hansenii MTCC 234

2012 ◽  
Vol 11 (7) ◽  
pp. 961-962 ◽  
Author(s):  
Shailesh Kumar ◽  
Anmoldeep Randhawa ◽  
Kaliannan Ganesan ◽  
Gajendra Pal Singh Raghava ◽  
Alok K. Mondal
Keyword(s):  
Comparative Analysis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Debaryomyces Hansenii ◽  
Draft Genome Sequence ◽  
Salt Tolerant ◽  
Content Type ◽  
Insight Into

ABSTRACTDebaryomyces hanseniiis one of the most halotolerant species of yeast, and the genome sequence ofD. hanseniistrain CBS767 is already available. Here we report the 11.46-Mb draft genome ofD. hanseniistrain MTCC 234, which is even more halotolerant than strain CBS767. Comparative analysis of these sequences would definitely provide further insight into the halotolerance of this yeast.

scholarly journals Draft Genome Sequence of Tumebacillus sp. Strain BK434, Isolated from the Roots of Eastern Cottonwood

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Dana L. Carper ◽  
Christopher W. Schadt ◽  
Leah H. Burdick ◽  
Udaya C. Kalluri ◽  
Dale A. Pelletier
Keyword(s):  
16S Rrna ◽  
Genome Sequence ◽  
Populus Deltoides ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Positive Bacterium ◽  
Gram Positive ◽  
Content Type ◽  
Eastern Cottonwood

ABSTRACT A Gram-positive bacterium was isolated from the root of an eastern cottonwood tree (Populus deltoides) in Georgia and identified as a Tumebacillus species with 99% 16S rRNA nucleotide identity to Tumebacillus avium. The genome is 4.6 Mbp and encodes 4,072 proteins and 251 RNAs.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

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