Isolation, characterization, and formulation of antagonistic bacteria for the management of seedlings damping-off and root rot disease of cucumber

2014 ◽  
Vol 60 (1) ◽  
pp. 25-33 ◽  
Author(s):  
Salah Eddin Khabbaz ◽  
Pervaiz A. Abbasi
Keyword(s):  
Plant Growth ◽  
Root Rot ◽  
Storage Period ◽  
Pythium Ultimum ◽  
In Vitro Tests ◽  
Antagonistic Bacteria ◽  
Damping Off ◽  
Biochemical Tests ◽  
Cucumber Seedlings

Antagonistic bacteria are common soil inhabitants with potential to be developed into biofungicides for the management of seedling damping-off, root rot, and other soil-borne diseases of various crops. In this study, antagonistic bacteria were isolated from a commercial potato field and screened for their growth inhibition of fungal and oomycete pathogens in laboratory tests. The biocontrol potential of the 3 most effective antagonistic bacteria from the in vitro tests was evaluated against seedling damping-off and root rot of cucumber caused by Pythium ultimum. Based on phenotypic characteristics, biochemical tests, and sequence analysis of 16S–23S rDNA gene, the 3 antagonistic bacteria were identified as Pseudomonas fluorescens (isolate 9A-14), Pseudomonas sp. (isolate 8D-45), and Bacillus subtilis (isolate 8B-1). All 3 bacteria promoted plant growth and suppressed Pythium damping-off and root rot of cucumber seedlings in growth-room assays. Both pre- and post-planting application of these bacteria to an infested peat mix significantly increased plant fresh masses by 113%–184% and percentage of healthy seedlings by 100%–290%, and decreased damping-off and root rot severity by 27%–50%. The peat and talc formulations of these antagonistic bacteria applied as seed or amendment treatments to the infested peat mix effectively controlled Pythium damping-off and root rot of cucumber seedlings and enhanced plant growth. The survival of all 3 antagonistic bacteria in peat and talc formulations decreased over time at room temperature, but the populations remained above 108CFU/g during the 180-day storage period. The peat formulation of a mixture of 3 bacteria was the best seed treatment, significantly increasing the plant fresh masses by 245% as compared with the Pythium control, and by 61.4% as compared with the noninfested control. This study suggests that the indigenous bacteria from agricultural soils can be developed and formulated as biofungicides for minimizing the early crop losses caused by seedling damping-off and root rot diseases.

Relationship between in vitro growth inhibition of pathogens and suppression of preemergence damping-off and postemergence root rot of white bean seedlings in the greenhouse by bacteria

1994 ◽  
Vol 40 (2) ◽  
pp. 113-119 ◽  
Author(s):  
M. S. Reddy ◽  
R. K. Hynes ◽  
G. Lazarovits
Keyword(s):  
Rhizoctonia Solani ◽  
Disease Severity ◽  
Fusarium Solani ◽  
Root Rot ◽  
Culture Media ◽  
Pythium Ultimum ◽  
Damping Off ◽  
Bacterial Strains ◽  
White Bean

One hundred and twenty diverse bacterial strains were screened under greenhouse conditions for their ability to protect white bean seedlings from preemergence damping-off caused by Pythium ultimum and Rhizoctonia solani and postemergence root rot by Fusarium solani f.sp. phaseoli. Preemergence mortality or root rot increased with an increase in the inoculum concentration of fungal isolates. For further testing, 200 propagules/g soil of P. ultimum, 3 propagules/g soil of R. solani, and log 3 conidia/g vermiculite of F. solani f.sp. phaseoli were used, as these rates provided an optimal level (approximately 50%) of disease severity. Bacterial strains suspended in sterile distilled water were added to pathogen-amended soil or vermiculite at log 7 colony-forming units/g soil or vermiculite prior to seeding. Final healthy stand and root rot were recorded 4 weeks after planting. Nine bacterial strains on P. ultimum, five on R. solani, and nine on F. solani f.sp. phaseoli provided significant (P = 0.05) suppression of disease severity compared with the nonbacterized control. Bacterial strains were also tested in vitro against the mycelial growth of the fungi on solid and liquid media. There was no relationship between the ability of bacterial strains to inhibit fungal vegetative growth on solid culture media and their ability to suppress pathogen activity in the greenhouse, but, for a few strains, the reduction in disease was linked to reduced growth of the pathogens in liquid media.Key words: White bean, damping-off, root rot, Pythium ultimum, Rhizoctonia solani, Fusarium solani f.sp. phaseoli.

scholarly journals ISOLATION, CHARACTERIZATION AND FORMULATION OF ANTAGONISTIC BACTERIA AGAINST FUNGAL PLANT PATHOGENS

AGROFOR ◽  
2019 ◽  
Vol 3 (3) ◽  
Author(s):  
Natalija ATANASOVA-PANCEVSKA ◽  
Dzoko KUNGULOVSKI
Keyword(s):  
Plant Pathogens ◽  
Storage Period ◽  
Plasmopara Viticola ◽  
Antagonistic Bacteria ◽  
Biochemical Tests ◽  
Crop Losses ◽  
Antagonistic Bacterium ◽  
Fungal Plant Pathogens ◽  
Paenibacillus Alvei

Concerns regarding food safety and the environment have led to reduced use ofagrochemicals and the development of sustainable agriculture. In this context,biological control of fungal plant pathogens can improve global food availability,one of the three pillars of food security, by reducing crop losses, particularly forlow-income farmers. Antagonistic bacteria are common soil inhabitants withpotential to be developed into biofungicides for the management of fungal plantpathogens. In this study, antagonistic bacterium was isolated from the commercialcompost from a Resen factory for compost and screened for its growth inhibition offungal pathogens in laboratory tests. The zone of inhibition (mm) was recorded bymeasuring the distance between the edges of the growing mycelium and theantagonistic bacterium. Five replications were maintained for each isolate. Basedon phenotypic characteristics, biochemical tests, and sequence analysis of 16SrRNA, the antagonistic bacterium was identified as Paenibacillus alvei (strain DZ-3). The bacterium suppressed the growth of all five tested fungal plant pathogens(Fusarium oxysporum, Rhizoctonia solani, Alternaria alternata, Botrytis cinereaand Plasmopara viticola) in in vitro conditions over. The survival of antagonisticbacterium in peat and talc formulations decreased time at room temperature, butthe populations remained above 108 CFU/g during the 180-day storage period. Thisstudy suggests that this bacterium can be developed and formulated asbiofungicides for minimizing the crop losses caused by fungal plant pathogens anddiseases caused by them.

scholarly journals Bacillus megaterium-Mediated Synthesis of Selenium Nanoparticles and Their Antifungal Activity against Rhizoctonia solani in Faba Bean Plants

2021 ◽  
Vol 7 (3) ◽  
pp. 195
Author(s):  
Amr H. Hashem ◽  
Amer M. Abdelaziz ◽  
Ahmed A. Askar ◽  
Hossam M. Fouda ◽  
Ahmed M. A. Khalil ◽  
...  
Keyword(s):  
Antifungal Activity ◽  
Vicia Faba ◽  
Root Rot ◽  
Antifungal Agents ◽  
Damping Off ◽  
Growth Promoters ◽  
Root Rot Disease ◽  
Rot Disease

Rhizoctonia root-rot disease causes severe economic losses in a wide range of crops, including Vicia faba worldwide. Currently, biosynthesized nanoparticles have become super-growth promoters as well as antifungal agents. In this study, biosynthesized selenium nanoparticles (Se-NPs) have been examined as growth promoters as well as antifungal agents against Rhizoctonia solani RCMB 031001 in vitro and in vivo. Se-NPs were synthesized biologically by Bacillus megaterium ATCC 55000 and characterized by using UV-Vis spectroscopy, XRD, dynamic light scattering (DLS), and transmission electron microscopy (TEM) imaging. TEM and DLS images showed that Se-NPs are mono-dispersed spheres with a mean diameter of 41.2 nm. Se-NPs improved healthy Vicia faba cv. Giza 716 seed germination, morphological, metabolic indicators, and yield. Furthermore, Se-NPs exhibited influential antifungal activity against R. solani in vitro as well as in vivo. Results revealed that minimum inhibition and minimum fungicidal concentrations of Se-NPs were 0.0625 and 1 mM, respectively. Moreover, Se-NPs were able to decrease the pre-and post-emergence of R. solani damping-off and minimize the severity of root rot disease. The most effective treatment method is found when soaking and spraying were used with each other followed by spraying and then soaking individually. Likewise, Se-NPs improve morphological and metabolic indicators and yield significantly compared with infected control. In conclusion, biosynthesized Se-NPs by B. megaterium ATCC 55000 are a promising and effective agent against R. solani damping-off and root rot diseases in Vicia faba as well as plant growth inducer.

scholarly journals Using Commercial Compost as Control Measures against Cucumber Root-Rot Disease

2013 ◽  
Vol 2013 ◽  
pp. 1-13 ◽  
Author(s):  
Kamel Kamal Sabet ◽  
Magdy Mohamed Saber ◽  
Mohamed Adel-Aziz El-Naggar ◽  
Nehal Samy El-Mougy ◽  
Hatem Mohamed El-Deeb ◽  
...  
Keyword(s):  
Root Rot ◽  
Control Measure ◽  
Disease Incidence ◽  
Pathogenic Fungi ◽  
Pythium Ultimum ◽  
Control Measures ◽  
Infested Soil ◽  
Fungal Isolates ◽  
Cucumber Root

Five commercial composts were evaluated to suppress the root-rot pathogens (Fusarium solani (Mart.) App. and Wr, Pythium ultimum Trow, Rhizoctonia solani Kuhn, and Sclerotium rolfsii Sacc.) of cucumber plants under in vitro and greenhouse conditions. In vitro tests showed that all tested unautoclaved and unfiltrated composts water extracts (CWEs) had inhibitor effect against pathogenic fungi, compared to autoclaved and filtrated ones. Also, the inhibitor effects of 40 bacteria and 15 fungi isolated from composts were tested against the mycelial growth of cucumber root-rot pathogens. Twenty two bacteria and twelve fungal isolates had antagonistic effect against root-rot pathogens. The antagonistic fungal isolates were identified as 6 isolates belong to the genus Aspergillus spp., 5 isolates belong to the genus Penicillium spp. and one isolate belong to the genus Chaetomium spp. Under greenhouse conditions, the obtained results in pot experiment using artificial infested soil with cucumber root-rot pathogens showed that the compost amended soil reduced the percentage of disease incidence, pathogenic fungi population, and improved the cucumber vegetative parameters as shoot length, root length, fresh weight, and dry weight. These results suggested that composts are consequently considered as control measure against cucumber root-rot pathogens.

scholarly journals Sensitivity of Rhizoctonia solani AG-2-2 from Sugar Beet to Fungicides

Plant Disease ◽  
2016 ◽  
Vol 100 (12) ◽  
pp. 2427-2433 ◽  
Author(s):  
Sahar Arabiat ◽  
Mohamed F. R. Khan
Keyword(s):  
Sugar Beet ◽  
Rhizoctonia Solani ◽  
Root Rot ◽  
The United States ◽  
Damping Off ◽  
Growth Assay ◽  
The Mean ◽  
Crown And Root Rot ◽  
Mean Concentration

Rhizoctonia damping-off and crown and root rot caused by Rhizoctonia solani are major diseases of sugar beet (Beta vulgaris L.) worldwide, and growers in the United States rely on fungicides for disease management. Sensitivity of R. solani to fungicides was evaluated in vitro using a mycelial radial growth assay and by evaluating disease severity on R. solani AG 2-2 inoculated plants treated with fungicides in the greenhouse. The mean concentration that caused 50% mycelial growth inhibition (EC50) values for baseline isolates (collected before the fungicides were registered for sugar beet) were 49.7, 97.1, 0.3, 0.2, and 0.9 μg ml−1 and for nonbaseline isolates (collected after registration and use of fungicides) were 296.1, 341.7, 0.9, 0.2, and 0.6 μg ml−1 for azoxystrobin, trifloxystrobin, pyraclostrobin, penthiopyrad, and prothioconazole, respectively. The mean EC50 values of azoxystrobin, trifloxystrobin, and pyraclostrobin significantly increased in the nonbaseline isolates compared with baseline isolates, with a resistant factor of 6.0, 3.5, and 3.0, respectively. Frequency of isolates with EC50 values >10 μg ml−1 for azoxystrobin and trifloxystrobin increased from 25% in baseline isolates to 80% in nonbaseline isolates. Although sensitivity of nonbaseline isolates of R. solani to quinone outside inhibitors decreased, these fungicides at labeled rates were still effective at controlling the pathogen under greenhouse conditions.

scholarly journals SKRINING BAKTERI ANTAGONIS RALSTONIA SP., PENYEBAB PENYAKIT LAYU BAKTERI PISANG DI LAMPUNG

2007 ◽  
Vol 7 (2) ◽  
pp. 100-110
Author(s):  
Titik Nur Aeny ◽  
Radix Suharjo ◽  
Subli Mujim
Keyword(s):  
Bacterial Wilt ◽  
Plant Disease ◽  
Hypersensitive Reaction ◽  
Soil Samples ◽  
Causal Agent ◽  
Antagonistic Bacteria ◽  
Bacterial Identification ◽  
Biochemical Tests ◽  
Colony Color

Screening on Antagonistic Bacteria of Ralstonia sp., the Causal Agent of Banana Bacterial Wilt in Lampung. This study was conducted on May to October 2006. This study was aimed to screen and collect potential bacterial antagonists toward Ralstonia sp., the causal agent of banana bacterial wilt; to identify the collected potential antagonists, and to test the capability of the bacterial antagonist in vitro. A survey to collect soil samples was conducted in 5 districts in Lampung, namely Bandar Lampung, Lampung Selatan, Tanggamus, Lampung Utara, Lampung Tengah, and Lampung Timur. Identification and test of the antagonistic capability was done in the Plant Disease Laboratory, University of Lampung. Identification of the antagonist bacteria was done through several biochemical tests i.e. : gram reaction, hypersensitive reaction on tobacco, oxidative-fermentative, colony color on YDC medium, fluoresence, nitrate reduction, gelatin reduction and starch hydrolise.  The results were then compared to the guidelines of bacterial identification. Twenty one soil samples were collected from those surveyed areas to isolate antagonist bacteria, and 104 isolates were found to be antagonistic to Ralstonia sp.. Based on the biochemical tests, it was showed that 59 isolates were in the group of fluorecent pseudomonad and 45 ones were still unidentified. Out of 104 isolates found, 41 isolates have the ability to inhibit the growth of Ralstonia sp.

Variations in Pathogenicity of Three Different Forms of Rhizoctonia Inoculum and Assessment of Cultivar Resistance of Sugar Beet

2021 ◽  
Vol 3 (1) ◽  
Author(s):  
Haque ME ◽  
◽  
Parvin MS ◽  
Keyword(s):  
Seed Germination ◽  
Sugar Beet ◽  
Root Rot ◽  
Large Scale ◽  
Culture Media ◽  
Damping Off ◽  
Require Time ◽  
Time Space ◽  
The Usa

Rhizoctonia solani causes pre-emergence and post-emergence damping-off, as well as crown and root rot of sugar beet (Beta vulgaris L.), which significantly affects the yield returns in the USA and Europe. The pathogen overwinters as sclerotia or melanized mycelium. Traditionally, the resistance of cultivars to R. solani is evaluated by scoring disease reactions at the crowns and roots of older seedlings, thus resistance is not evaluated during seed germination. Moreover, earlier studies evaluated cultivars resistance to R. solani using colonized whole barley or wheat grains which, unlike sclerotia, are artificial inocula of the pathogen that require time, space and technical know-how to produce. Moreover, colonized grains are prone to contamination with other pathogens, consumed by rodents/birds while applied in the field, and are often uneconomic. Considering those limitations, a study was undertaken (1) to develop in vitro methods to generate large-scale sclerotia, (2) to compare pathogenic potentials of sclerotia, mycelia, and colonized barley grains for optimization of dampingoff assays, and (3) to evaluate Rhizoctonia resistance of selected commercial cultivars during the seed germination phase. Comparing six different culture media, we found that R. solani had the highest radial growth (8.9 ± 0.04, cm³) at 8-days and the maximum number of sclerotia produced (203 ± 4.6) at 28-days in CV8 medium. We demonstrated significant differences in pathogenicity of the three different forms of R. solani inocula and susceptibility of cultivars to preand post-emergence damping-off. The highest pre-emergence damping-off and root rot were observed with sclerotia, and the highest post-emergence dampingoff was recorded with both sclerotial and colonized barley inocula. In addition, varietal differences in susceptibility to pre- and post-emergence damping-off were noted. The highest pre-emergence damping-off was recorded on cv Crystal 101RR and lowest in Maribo MA 504. The highest post-emergence damping-off was recorded on BTS 8500 and the lowest in Crystal 467. The maximum mean root rot was observed in BTS 8500, BTS 8606, and Crystal 101R. Our studies demonstrated that sclerotia serve as efficient natural inocula, reemphasized that host-pathogen interactions differ at the early vs. late stages of sugar beet growth, and highlighted the need to reevaluate commercial sugar beet cultivars for resistance at the seed germination stage.

Identification of metalaxyl and ethaboxam insensitive Pythium sylvaticum pathogenic to pulse crops in Montana, USA.

2021 ◽  
Author(s):  
Lipi Parikh ◽  
Swarnalatha Moparthi ◽  
Frankie Crutcher ◽  
Mary Burrows
Keyword(s):  
Root Rot ◽  
Damping Off ◽  
Management Options ◽  
Fungicide Sensitivity ◽  
Root Rots ◽  
Pulse Crops ◽  
Pythium Root Rot ◽  
Pythium Sylvaticum ◽  
Potential Pathogenicity

Pythium root rot and damping-off caused by Pythium spp. are important diseases of pulse crops. In a 2016 pathogen survey from dry pea growing fields in Montana, along with commonly known causal agents P. ultimum and P. irregulare, an isolate identified as P. sylvaticum (LPPY17) was isolated from the rhizosphere of a diseased pea plant collected from Valley County, MT. Root rots and damping-off caused by P. sylvaticum have not previously been reported for chickpea, pea, and lentil crops. The isolate LPPY17 was tested for fungicide resistance in vitro, and results indicated a reduced sensitivity to metalaxyl and ethaboxam containing fungicides. LPPY17 was also tested for pathogenicity on chickpea, pea, and lentil seedlings in the greenhouse, and the results from the study revealed LPPY17 is capable of causing both root rots and damping off. Due to the potential pathogenicity and reduced fungicide sensitivity of this species, in the future it will be important to monitor for P. sylvaticum in pulse root rot surveys and diagnostics, as management options may be different from other common Pythium spp.

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