Chemical interpretation: basis set use and the Periodic Table

1992 ◽  
Vol 70 (2) ◽  
pp. 631-635 ◽  
Author(s):  
Leland C. Allen

Examination of contemporary quantum chemistry literature and texts strongly indicates the need for new interpretative measures and indices that have heuristic chemical appeal, but are rigorously defined by physics. A closer look at the Periodic Table in search of such measures leads to configurationenergy (CE), the average energy of a valence electron, which adds a third intrinsic dimension to the Table itself, and is also strongly correlated with atomic energy level spacings. CE can be translated into a quantum mechanical operator whose expectation value in molecules and solids is the Energy Index, EIA. Many chemical effects: rotation and inversion barriers, the anomeric and α-effects, hyperconjugation, etc., appear capable of being quantified, unified, and simplified by EIA, but because it is a one-electron entity, it does not correlate with binding energies or heats of formation. EIA is insitu electronegativity, and systematic release of basis set contraction constraints permits a controlled analysis of bond polarity in terms of radial and angular hybridization changes.

2019 ◽  
Author(s):  
Brian Nguyen ◽  
Guo P Chen ◽  
Matthew M. Agee ◽  
Asbjörn M. Burow ◽  
Matthew Tang ◽  
...  

Prompted by recent reports of large errors in noncovalent interaction (NI) energies obtained from many-body perturbation theory (MBPT), we compare the performance of second-order Møller–Plesset MBPT (MP2), spin-scaled MP2, dispersion-corrected semilocal density functional approximations (DFA), and the post-Kohn–Sham random phase approximation (RPA) for predicting binding energies of supramolecular complexes contained in the S66, L7, and S30L benchmarks. All binding energies are extrapolated to the basis set limit, corrected for basis set superposition errors, and compared to reference results of the domain-based local pair-natural orbital coupled-cluster (DLPNO-CCSD(T)) or better quality. Our results confirm that MP2 severely overestimates binding energies of large complexes, producing relative errors of over 100% for several benchmark compounds. RPA relative errors consistently range between 5-10%, significantly less than reported previously using smaller basis sets, whereas spin-scaled MP2 methods show limitations similar to MP2, albeit less pronounced, and empirically dispersion-corrected DFAs perform almost as well as RPA. Regression analysis reveals a systematic increase of relative MP2 binding energy errors with the system size at a rate of approximately 1‰ per valence electron, whereas the RPA and dispersion-corrected DFA relative errors are virtually independent of the system size. These observations are corroborated by a comparison of computed rotational constants of organic molecules to gas-phase spectroscopy data contained in the ROT34 benchmark. To analyze these results, an asymptotic adiabatic connection symmetry-adapted perturbation theory (AC-SAPT) is developed which uses monomers at full coupling whose ground-state density is constrained to the ground-state density of the complex. Using the fluctuation–dissipation theorem, we obtain a nonperturbative “screened second-order” expression for the dispersion energy in terms of monomer quantities which is exact for non-overlapping subsystems and free of induction terms; a first-order RPA-like approximation to the Hartree, exchange, and correlation kernel recovers the macroscopic Lifshitz limit. The AC-SAPT expansion of the interaction energy is obtained from Taylor expansion of the coupling strength integrand. Explicit expressions for the convergence radius of the AC-SAPT series are derived within RPA and MBPT and numerically evaluated. Whereas the AC-SAPT expansion is always convergent for nondegenerate monomers when RPA is used, it is found to spuriously diverge for second-order MBPT, except for the smallest and least polarizable monomers. The divergence of the AC-SAPT series within MBPT is numerically confirmed within RPA; prior numerical results on the convergence of the SAPT expansion for MBPT methods are revisited and support this conclusion once sufficiently high orders are included. The cause of the failure of MBPT methods for NIs of large systems is missing or incomplete “electrodynamic” screening of the Coulomb interaction due to induced particle–hole pairs between electrons in different monomers, leaving the effective interaction too strong for AC-SAPT to converge. Hence, MBPT cannot be considered reliable for quantitative predictions of NIs, even in moderately polarizable molecules with a few tens of atoms. The failure to accurately account for electrodynamic polarization makes MBPT qualitatively unsuitable for applications such as NIs of nanostructures, macromolecules, and soft materials; more robust non-perturbative approaches such as RPA or coupled cluster methods should be used instead whenever possible.<br>


2015 ◽  
Vol 17 (22) ◽  
pp. 14636-14646 ◽  
Author(s):  
Grant E. Johnson ◽  
Astrid Olivares ◽  
David Hill ◽  
Julia Laskin

Loss of substituted phosphine ligands is strongly correlated with the electron donating ability of the phosphorous lone pair. The results indicate that the relative ligand binding energies increase in the order PMe3 < PPhMe2 < PPh2Me < PPh3 < PPh2Cy < PPhCy2 < PCy3.


2010 ◽  
Vol 2010 ◽  
pp. 1-6 ◽  
Author(s):  
Prasad Yedlapalli ◽  
Sangyong Lee ◽  
Jae W. Lee

Structure II clathrate hydrates of pure hydrogen and binary hydrates of are studied using ab initio calculations to determine the stable occupancies of small cavities. Ab initio calculations are carried out for a double cavity consisting of one dodecahedron (small cavity) and one hexakaidecahedron (large cavity). These two cavities are attached to each other as in sII hydrates to form a double cavity. One or two molecules are placed in the small cavity and one THF (or 4 molecules) molecule is placed in the large cavity. We have determined the binding energies of the double cavities at the MP2 level using various basis sets (3-21G, 3-21G(2p), 3-21 G(2p), 6-31G, 6-31G(2p), and 6-31 G(2p)). Different basis sets yield different stable occupancies of the small cavity. The results from the highest basis set (6-31 G(2p) with zero point energy corrections) indicate that the single occupancy is slightly more favorable than the double occupancy in both the cases of pure hydrates and THF + double hydrates.


Author(s):  
N. C. Pyper

The periodic table provides a deep unifying principle for understanding chemical behaviour by relating the properties of different elements. For those belonging to the fifth and earlier rows, the observations concerning these properties and their interrelationships acquired a sound theoretical basis by the understanding of electronic behaviour provided by non-relativistic quantum mechanics. However, for elements of high nuclear charge, such as occur in the sixth and higher rows of the periodic table, the systematic behaviour explained by non-relativistic quantum mechanics begins to fail. These problems are resolved by realizing that relativistic quantum mechanics is required in heavy elements where electrons velocities can reach significant fractions of the velocity of light. An essentially non-mathematical description of relativistic quantum mechanics explains how relativity modifies valence electron behaviour in heavy elements. The direct relativistic effect, arising from the relativistic increase of the electron mass with velocity, contracts orbitals of low angular momentum, increasing their binding energies. The indirect relativistic effect causes valence orbitals of high angular momentum to be more effectively screened as a result of the relativistic contraction of the core orbitals. In the alkali and alkaline earths, the s orbital contractions reverse the chemical trends on descending these groups, with heavy elements becoming less reactive. For valence d and f electrons, the indirect relativistic effect enhances the reductions in their binding energies on descending the periodic table. The d electrons in the heavier coinage metals thus become more chemically active, which causes these elements to exhibit higher oxidation states. The indirect effect on d orbitals causes the chemistries of the sixth-row transition elements to differ significantly from the very similar behaviours of the fourth and fifth-row transition series. The relativistic destabilization of f orbitals causes lanthanides to be chemically similar, forming mainly ionic compounds in oxidation state three, while allowing the earlier actinides to show a richer range of chemical behaviour with several higher oxidation states. For the 7p series of elements, relativity divides the non-relativistic p shell of three degenerate orbitals into one of much lower energy with the energies of the remaining two being substantially increased. These orbitals have angular shapes and spin distributions so different from those of the non-relativistic ones that the ability of the 7p elements to form covalent bonds is greatly inhibited. This article is part of the theme issue ‘Mendeleev and the periodic table’.


1968 ◽  
Vol 48 (8) ◽  
pp. 3779-3794 ◽  
Author(s):  
C. S. Fadley ◽  
S. B. M. Hagstrom ◽  
M. P. Klein ◽  
D. A. Shirley

2014 ◽  
Vol 13 (07) ◽  
pp. 1450057
Author(s):  
Cuihong Wang ◽  
Yue Jiang ◽  
Ruiqin Zhang ◽  
Zijing Lin

The analysis of π/π and H /π interactions in complexes are a challenging aspect of theoretical research. Due to the different approximations of different levels of theory, results tend to be inconsistent. We compared the reliabilities of HF, SVWN, M06L, PW91, BLYP, B3LYP, BHandHLYP, B97D, MP2, and DFTB-D approaches in researching π/π and H /π interactions by calculating the binding energies of five benzene-containing dimers. The effects of 6-31+G**, 6-311++G** and 6-311++G(2df,2p) basis sets on the results were analyzed too. We found that the DFTB-D and B97D methods combined with the 6-311++G** basis set perform well for dimers that contain π/π and H /π interactions. With high efficiency and satisfactory precision, DFTB-D is helpful for the calculation of complexes containing π/π and H /π stacking. We further calculated the structures and properties of phenylalanine-containing dimers using the DFTB-D and B97D methods. The properties of low energy conformers such as rotational constants, dipole moments and molecular orbitals were also analyzed. These data should be helpful for research into systems that contain π/π and H /π stacking.


2020 ◽  
Vol 21 (11) ◽  
pp. 3479-3497
Author(s):  
Rinat Kashaev ◽  
Sergey Sergeev

Abstract We address the spectral problem of the formally normal quantum mechanical operator associated with the quantised mirror curve of the toric (almost) del Pezzo Calabi–Yau threefold called local $${\mathbb {P}}^2$$ P 2 in the case of complex values of Planck’s constant. We show that the problem can be approached in terms of the Bethe ansatz-type highly transcendental equations.


1976 ◽  
Vol 54 (22) ◽  
pp. 2225-2239 ◽  
Author(s):  
R. J. W. Hodgson ◽  
J. Tan

The fully off-shell T matrix is generated from a real symmetric function σ(k,k′) which in turn can be obtained from a knowledge of the two-body wave function in the interaction interior. The resulting T matrices are employed to compute the binding energies of 16O, 40Ca, and nuclear matter. Limiting the two-body wave function to physically acceptable forms limits the allowed σ functions. A 'difference integral' is defined in terms of the two-body scattering wave function, which seems to be strongly correlated with the binding energies.


Sign in / Sign up

Export Citation Format

Share Document