Cell Assembly Signatures Defined by Short-Term Synaptic Plasticity in Cortical Networks

2015 ◽  
Vol 25 (07) ◽  
pp. 1550026 ◽  
Author(s):  
Luis Carrillo-Reid ◽  
Violeta G. Lopez-Huerta ◽  
Marianela Garcia-Munoz ◽  
Stephan Theiss ◽  
Gordon W. Arbuthnott

The cell assembly (CA) hypothesis has been used as a conceptual framework to explain how groups of neurons form memories. CAs are defined as neuronal pools with synchronous, recurrent and sequential activity patterns. However, neuronal interactions and synaptic properties that define CAs signatures have been difficult to examine because identities and locations of assembly members are usually unknown. In order to study synaptic properties that define CAs, we used optical and electrophysiological approaches to record activity of identified neurons in mouse cortical cultures. Population analysis and graph theory techniques allowed us to find sequential patterns that represent repetitive transitions between network states. Whole cell pair recordings of neurons participating in repeated sequences demonstrated that synchrony is exhibited by groups of neurons with strong synaptic connectivity (concomitant firing) showing short-term synaptic depression (STD), whereas alternation (sequential firing) is seen in groups of neurons with weaker synaptic connections showing short-term synaptic facilitation (STF). Decreasing synaptic weights of a network promoted the generation of sequential activity patterns, whereas increasing synaptic weights restricted state transitions. Thus in simple cortical networks of real neurons, basic signatures of CAs, the properties that underlie perception and memory in Hebb's original description, are already present.

2012 ◽  
Vol 24 (5) ◽  
pp. 1147-1185 ◽  
Author(s):  
C. C. Alan Fung ◽  
K. Y. Michael Wong ◽  
He Wang ◽  
Si Wu

Experimental data have revealed that neuronal connection efficacy exhibits two forms of short-term plasticity: short-term depression (STD) and short-term facilitation (STF). They have time constants residing between fast neural signaling and rapid learning and may serve as substrates for neural systems manipulating temporal information on relevant timescales. This study investigates the impact of STD and STF on the dynamics of continuous attractor neural networks and their potential roles in neural information processing. We find that STD endows the network with slow-decaying plateau behaviors: the network that is initially being stimulated to an active state decays to a silent state very slowly on the timescale of STD rather than on that of neuralsignaling. This provides a mechanism for neural systems to hold sensory memory easily and shut off persistent activities gracefully. With STF, we find that the network can hold a memory trace of external inputs in the facilitated neuronal interactions, which provides a way to stabilize the network response to noisy inputs, leading to improved accuracy in population decoding. Furthermore, we find that STD increases the mobility of the network states. The increased mobility enhances the tracking performance of the network in response to time-varying stimuli, leading to anticipative neural responses. In general, we find that STD and STP tend to have opposite effects on network dynamics and complementary computational advantages, suggesting that the brain may employ a strategy of weighting them differentially depending on the computational purpose.


2020 ◽  
Author(s):  
Ni Ji ◽  
Gurrein K. Madan ◽  
Guadalupe I. Fabre ◽  
Alyssa Dayan ◽  
Casey M. Baker ◽  
...  

ABSTRACTTo adapt to their environments, animals must generate behaviors that are closely aligned to a rapidly changing sensory world. However, behavioral states such as foraging or courtship typically persist over long time scales to ensure proper execution. It remains unclear how neural circuits generate persistent behavioral states while maintaining the flexibility to select among alternative states when the sensory context changes. Here, we elucidate the functional architecture of a neural circuit controlling the choice between roaming and dwelling states, which underlie exploration and exploitation during foraging in C. elegans. By imaging ensemble-level neural activity in freely-moving animals, we identify stable, circuit-wide activity patterns corresponding to each behavioral state. Combining circuit-wide imaging with genetic analysis, we find that mutual inhibition between two antagonistic neuromodulatory systems underlies the persistence and mutual exclusivity of the opposing network states. Through machine learning analysis and circuit perturbations, we identify a sensory processing neuron that can transmit information about food odors to both the roaming and dwelling circuits and bias the animal towards different states in different sensory contexts, giving rise to context-appropriate state transitions. Our findings reveal a potentially general circuit architecture that enables flexible, sensory-driven control of persistent behavioral states.


2012 ◽  
Vol 107 (4) ◽  
pp. 1123-1141 ◽  
Author(s):  
Paweł Kuśmierek ◽  
Michael Ortiz ◽  
Josef P. Rauschecker

Auditory cortical processing is thought to be accomplished along two processing streams. The existence of a posterior/dorsal stream dealing, among others, with the processing of spatial aspects of sound has been corroborated by numerous studies in several species. An anterior/ventral stream for the processing of nonspatial sound qualities, including the identification of sounds such as species-specific vocalizations, has also received much support. Originally discovered in anterolateral belt cortex, most recent work on the anterior/ventral pathway has been performed on far anterior superior temporal (ST) areas and on ventrolateral prefrontal cortex (VLPFC). Regions of the anterior/ventral stream near its origin in early auditory areas have been less explored. In the present study, we examined three early auditory regions with different anteroposterior locations (caudal, middle, and rostral) in awake rhesus macaques. We analyzed how well classification based on sound-evoked activity patterns of neuronal populations replicates the original stimulus categories. Of the three regions, the rostral region (rR), which included core area R and medial belt area RM, yielded the greatest classification success across all stimulus classes or between classes of natural sounds. Starting from ∼80 ms past stimulus onset, clustering based on the population response in rR became clearly more successful than clustering based on responses from any other region. Our study demonstrates that specialization for sound-identity processing can be found very early in the auditory ventral stream. Furthermore, the fact that this processing develops over time can shed light on underlying mechanisms. Finally, we show that population analysis is a more sensitive method for revealing functional specialization than conventional types of analysis.


2021 ◽  
Vol 15 ◽  
Author(s):  
Robert Kozma ◽  
Sanqing Hu ◽  
Yury Sokolov ◽  
Tim Wanger ◽  
Andreas L. Schulz ◽  
...  

This work studies the evolution of cortical networks during the transition from escape strategy to avoidance strategy in auditory discrimination learning in Mongolian gerbils trained by the well-established two-way active avoidance learning paradigm. The animals were implanted with electrode arrays centered on the surface of the primary auditory cortex and electrocorticogram (ECoG) recordings were made during performance of an auditory Go/NoGo discrimination task. Our experiments confirm previous results on a sudden behavioral change from the initial naïve state to an avoidance strategy as learning progresses. We employed two causality metrics using Granger Causality (GC) and New Causality (NC) to quantify changes in the causality flow between ECoG channels as the animals switched to avoidance strategy. We found that the number of channel pairs with inverse causal interaction significantly increased after the animal acquired successful discrimination, which indicates structural changes in the cortical networks as a result of learning. A suitable graph-theoretical model is developed to interpret the findings in terms of cortical networks evolving during cognitive state transitions. Structural changes lead to changes in the dynamics of neural populations, which are described as phase transitions in the network graph model with small-world connections. Overall, our findings underscore the importance of functional reorganization in sensory cortical areas as a possible neural contributor to behavioral changes.


Terminology ◽  
2011 ◽  
Vol 17 (1) ◽  
pp. 134-156 ◽  
Author(s):  
Aurélie Picton

This article presents a first description and a proposal for the classification of the evolution phenomena involved in short-term diachrony in the field of space. It is based on the principles of Textual Terminology and relies on a tool-based analysis of two diachronic corpora. The linguistic methodology is briefly described but the emphasis is on the list of evolution phenomena revealed through our analysis. These results present an original description of knowledge evolution: 17 types of evolution are listed, revealing the heterogeneity and richness of terminology dynamics and offering a descriptive basis to start new subsequent research that would complete this typology


2008 ◽  
Vol 99 (3) ◽  
pp. 1435-1450 ◽  
Author(s):  
Luis Carrillo-Reid ◽  
Fatuel Tecuapetla ◽  
Dagoberto Tapia ◽  
Arturo Hernández-Cruz ◽  
Elvira Galarraga ◽  
...  

Correlated activity in cortico-basal ganglia circuits plays a key role in the encoding of movement, associative learning and procedural memory. How correlated activity is assembled by striatal microcircuits is not understood. Calcium imaging of striatal neuronal populations, with single-cell resolution, reveals sporadic and asynchronous activity under control conditions. However, N-methyl-d-aspartate (NMDA) application induces bistability and correlated activity in striatal neurons. Widespread neurons within the field of observation present burst firing. Sets of neurons exhibit episodes of recurrent and synchronized bursting. Dimensionality reduction of network dynamics reveals functional states defined by cell assemblies that alternate their activity and display spatiotemporal pattern generation. Recurrent synchronous activity travels from one cell assembly to the other often returning to the original assembly; suggesting a robust structure. An initial search into the factors that sustain correlated activity of neuronal assemblies showed a critical dependence on both intrinsic and synaptic mechanisms: blockage of fast glutamatergic transmission annihilates all correlated firing, whereas blockage of GABAergic transmission locked the network into a single dominant state that eliminates assembly diversity. Reduction of L-type Ca2+-current restrains synchronization. Each cell assembly comprised different cells, but a small set of neurons was shared by different assemblies. A great proportion of the shared neurons was local interneurons with pacemaking properties. The network dynamics set into action by NMDA in the striatal network may reveal important properties of striatal microcircuits under normal and pathological conditions.


2012 ◽  
Vol 34 (1) ◽  
pp. 49 ◽  
Author(s):  
Lisa Warnecke ◽  
Gerhard Körtner ◽  
Chris J. Burwell ◽  
James M. Turner ◽  
Fritz Geiser

Since little information is available on the spatial ecology of small arid-zone marsupials, we used radio-tracking to investigate the small-scale activity patterns of three dasyurid species in semiarid Australia. Sminthopsis crassicaudata, Planigale gilesi and S. macroura were equipped with miniature radio-transmitters to monitor choice of resting sites and daily movements. Resting sites were located within an area of 1.27 ± 0.36 ha, 0.12 ± 0.02 ha and 3.60 ± 0.95 ha, respectively and individuals returned to previously used resting sites regularly. We also analysed scat samples of S. crassicaudata and P. gilesi, and identified Araneae, Hymenoptera and Orthoptera as the major prey taxa for both species. Our study presents the first radio-tracking-based information on movements for these species in semiarid habitat, which indicates that, over a period of several weeks, resting sites are situated within small and defined areas.


2014 ◽  
Vol 369 (1640) ◽  
pp. 20130223 ◽  
Author(s):  
Oliver Ebenhöh ◽  
Geoffrey Fucile ◽  
Giovanni Finazzi ◽  
Jean-David Rochaix ◽  
Michel Goldschmidt-Clermont

Photosynthetic eukaryotes house two photosystems with distinct light absorption spectra. Natural fluctuations in light quality and quantity can lead to unbalanced or excess excitation, compromising photosynthetic efficiency and causing photodamage. Consequently, these organisms have acquired several distinct adaptive mechanisms, collectively referred to as non-photochemical quenching (NPQ) of chlorophyll fluorescence, which modulates the organization and function of the photosynthetic apparatus. The ability to monitor NPQ processes fluorometrically has led to substantial progress in elucidating the underlying molecular mechanisms. However, the relative contribution of distinct NPQ mechanisms to variable light conditions in different photosynthetic eukaryotes remains unclear. Here, we present a mathematical model of the dynamic regulation of eukaryotic photosynthesis using ordinary differential equations. We demonstrate that, for Chlamydomonas , our model recapitulates the basic fluorescence features of short-term light acclimation known as state transitions and discuss how the model can be iteratively refined by comparison with physiological experiments to further our understanding of light acclimation in different species.


2020 ◽  
Author(s):  
Nicola Pedreschi ◽  
Christophe Bernard ◽  
Wesley Clawson ◽  
Pascale Quilichini ◽  
Alain Barrat ◽  
...  

ABSTRACTNeural computation is associated with the emergence, reconfiguration and dissolution of cell assemblies in the context of varying oscillatory states. Here, we describe the complex spatio-temporal dynamics of cell assemblies through temporal network formalism. We use a sliding window approach to extract sequences of networks of information sharing among single units in hippocampus and enthorinal cortex during anesthesia and study how global and node-wise functional connectivity properties evolve along time and as a function of changing global brain state (theta vs slow-wave oscillations). First, we find that information sharing networks display, at any time, a core-periphery structure in which an integrated core of more tightly functionally interconnected units link to more loosely connected network leaves. However the units participating to the core or to the periphery substantially change across time-windows, with units entering and leaving the core in a smooth way. Second, we find that discrete network states can be defined on top of this continuously ongoing liquid core-periphery reorganization. Switching between network states results in a more abrupt modification of the units belonging to the core and is only loosely linked to transitions between global oscillatory states. Third, we characterize different styles of temporal connectivity that cells can exhibit within each state of the sharing network. While inhibitory cells tend to be central, we show that, otherwise, anatomical localization only poorly influences the patterns of temporal connectivity of the different cells. Furthermore, cells can change temporal connectivity style when the network changes state. Altogether, these findings reveal that the sharing of information mediated by the intrinsic dynamics of hippocampal and enthorinal cortex cell assemblies have a rich spatiotemporal structure, which could not have been identified by more conventional time- or state-averaged analyses of functional connectivity.AUTHOR SUMMARYIt is generally thought that computations performed by local brain circuits rely on complex neural processes, associated to the flexible waxing and waning of cell assemblies, i.e. ensemble of cells firing in tight synchrony. Although cell assembly formation is inherently and unavoidably dynamical, it is still common to find studies in which essentially “static” approaches are used to characterize this process. In the present study, we adopt instead a temporal network approach. Avoiding usual time averaging procedures, we reveal that hub neurons are not hardwired but that cells vary smoothly their degree of integration within the assembly core. Furthermore, our temporal network framework enables the definition of alternative possible styles of “hubness”. Some cells may share information with a multitude of other units but only in an intermittent manner, as “activists” in a flash mob. In contrast, some other cells may share information in a steadier manner, as resolute “lobbyists”. Finally, by avoiding averages over pre-imposed states, we show that within each global oscillatory state a rich switching dynamics can take place between a repertoire of many available network states. We thus show that the temporal network framework provides a natural and effective language to rigorously describe the rich spatiotemporal patterns of information sharing instantiated by cell assembly evolution.


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