The Oscillation Score: An Efficient Method for Estimating Oscillation Strength in Neuronal Activity

2008 ◽  
Vol 99 (3) ◽  
pp. 1333-1353 ◽  
Author(s):  
Raul C. Mureşan ◽  
Ovidiu F. Jurjuţ ◽  
Vasile V. Moca ◽  
Wolf Singer ◽  
Danko Nikolić

We present a method that estimates the strength of neuronal oscillations at the cellular level, relying on autocorrelation histograms computed on spike trains. The method delivers a number, termed oscillation score, that estimates the degree to which a neuron is oscillating in a given frequency band. Moreover, it can also reliably identify the oscillation frequency and strength in the given band, independently of the oscillation in other frequency bands, and thus it can handle superimposed oscillations on multiple scales ( theta, alpha, beta, gamma, etc.). The method is relatively simple and fast. It can cope with a low number of spikes, converging exponentially fast with the number of spikes, to a stable estimation of the oscillation strength. It thus lends itself to the analysis of spike-sorted single-unit activity from electrophysiological recordings. We show that the method performs well on experimental data recorded from cat visual cortex and also compares favorably to other methods. In addition, we provide a measure, termed confidence score, that determines the stability of the oscillation score estimate over trials.

Filomat ◽  
2017 ◽  
Vol 31 (15) ◽  
pp. 4933-4944
Author(s):  
Dongseung Kang ◽  
Heejeong Koh

We obtain a general solution of the sextic functional equation f (ax+by)+ f (ax-by)+ f (bx+ay)+ f (bx-ay) = (ab)2(a2 + b2)[f(x+y)+f(x-y)] + 2(a2-b2)(a4-b4)[f(x)+f(y)] and investigate the stability of sextic Lie *-derivations associated with the given functional equation via fixed point method. Also, we present a counterexample for a single case.


Nutrients ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 1624
Author(s):  
Yuchen Li ◽  
Gilda Aiello ◽  
Enrico Mario Alessandro Fassi ◽  
Giovanna Boschin ◽  
Martina Bartolomei ◽  
...  

Chlorella pyrenoidosa (C. pyrenoidosa) is a microalgae species with a remarkably high protein content that may potentially become a source of hypotensive and hypoglycemic peptides. In this study, C. pyrenoidosa proteins were extracted and hydrolyzed overnight with pepsin and trypsin with final degrees of hydrolysis of 18.7% and 35.5%, respectively. By LC-MS/MS, 47 valid peptides were identified in the peptic hydrolysate (CP) and 66 in the tryptic one (CT). At the concentration of 1.0 mg/mL, CP and CT hydrolysates inhibit in vitro the angiotensin-converting enzyme (ACE) activity by 84.2 ± 0.37% and 78.6 ± 1.7%, respectively, whereas, tested at cellular level at the concentration of 5.0 mg/mL, they reduce the ACE activity by 61.5 ± 7.7% and 69.9 ± 0.8%, respectively. At the concentration of 5.0 mg/mL, they decrease in vitro the DPP-IV activity by 63.7% and 69.6% and in Caco-2 cells by 38.4% and 42.5%, respectively. Short peptides (≤10 amino acids) were selected for investigating the potential interaction with ACE and DPP-IV by using molecular modeling approaches and four peptides were predicted to block both enzymes. Finally, the stability of these peptides was investigated against gastrointestinal digestion.


2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Ramanshu P. Singh ◽  
Shakti Yadav ◽  
Giridhar Mishra ◽  
Devraj Singh

Abstract The elastic and ultrasonic properties have been evaluated at room temperature between the pressure 0.6 and 10.4 GPa for hexagonal closed packed (hcp) hafnium (Hf) metal. The Lennard-Jones potential model has been used to compute the second and third order elastic constants for Hf. The elastic constants have been utilized to calculate the mechanical constants such as Young’s modulus, bulk modulus, shear modulus, Poisson’s ratio, and Zener anisotropy factor for finding the stability and durability of hcp hafnium metal within the chosen pressure range. The second order elastic constants were also used to compute the ultrasonic velocities along unique axis at different angles for the given pressure range. Further thermophysical properties such as specific heat per unit volume and energy density have been estimated at different pressures. Additionally, ultrasonic Grüneisen parameters and acoustic coupling constants have been found out at room temperature. Finally, the ultrasonic attenuation due to phonon–phonon interaction and thermoelastic mechanisms has been investigated for the chosen hafnium metal. The obtained results have been discussed in correlation with available findings for similar types of hcp metals.


Genetics ◽  
2003 ◽  
Vol 163 (1) ◽  
pp. 91-101 ◽  
Author(s):  
Erin N Asleson ◽  
Dennis M Livingston

Abstract We investigated the stability of the Saccharomyces cerevisiae Rad52 protein to learn how a cell controls its quantity and longevity. We measured the cellular levels of wild-type and mutant forms of Rad52p when expressed from the RAD52 promoter and the half-lives of the various forms of Rad52p when expressed from the GAL1 promoter. The wild-type protein has a half-life of 15 min. rad52 mutations variably affect the cellular levels of the protein products, and these levels correlate with the measured half-lives. While missense mutations in the N terminus of the protein drastically reduce the cellular levels of the mutant proteins, two mutations—one a deletion of amino acids 210-327 and the other a missense mutation of residue 235—increase the cellular level and half-life more than twofold. These results suggest that Rad52p is subject to post-translational regulation. Proteasomal mutations have no effect on Rad52p half-life but increase the amount of RAD52 message. In contrast to Rad52p, the half-life of Rad51p is >2 hr, and RAD51 expression is unaffected by proteasomal mutations. These differences between Rad52p and Rad51p suggest differential regulation of two proteins that interact in recombinational repair.


Author(s):  
Harald Fripertinger ◽  
Jens Schwaiger

AbstractIt was proved in Forti and Schwaiger (C R Math Acad Sci Soc R Can 11(6):215–220, 1989), Schwaiger (Aequ Math 35:120–121, 1988) and with different methods in Schwaiger (Developments in functional equations and related topics. Selected papers based on the presentations at the 16th international conference on functional equations and inequalities, ICFEI, Bȩdlewo, Poland, May 17–23, 2015, Springer, Cham, pp 275–295, 2017) that under the assumption that every function defined on suitable abelian semigroups with values in a normed space such that the norm of its Cauchy difference is bounded by a constant (function) is close to some additive function, i.e., the norm of the difference between the given function and that additive function is also bounded by a constant, the normed space must necessarily be complete. By Schwaiger (Ann Math Sil 34:151–163, 2020) this is also true in the non-archimedean case. Here we discuss the situation when the bound is a suitable non-constant function.


The method of multiple scales is used to examine the slow modulation of a harmonic wave moving over the surface of a two dimensional channel. The flow is assumed inviscid and incompressible, but the basic flow takes the form of an arbitrary shear. The appropriate nonlinear Schrödinger equation is derived with coefficients that depend, in a complicated way, on the shear. It is shown that this equation agrees with previous work for the case of no shear; it also agrees in the long wave limit with the appropriate short wave limit of the Korteweg-de Vries equation, the shear being arbitrary. Finally, it is remarked that the stability of Stokes waves over any shear can be examined by using the results derived here.


2013 ◽  
Vol 2013 ◽  
pp. 1-18 ◽  
Author(s):  
Bamadev Sahoo ◽  
L. N. Panda ◽  
G. Pohit

The nonlinear vibration of a travelling beam subjected to principal parametric resonance in presence of internal resonance is investigated. The beam velocity is assumed to be comprised of a constant mean value along with a harmonically varying component. The stretching of neutral axis introduces geometric cubic nonlinearity in the equation of motion of the beam. The natural frequency of second mode is approximately three times that of first mode; a three-to-one internal resonance is possible. The method of multiple scales (MMS) is directly applied to the governing nonlinear equations and the associated boundary conditions. The nonlinear steady state response along with the stability and bifurcation of the beam is investigated. The system exhibits pitchfork, Hopf, and saddle node bifurcations under different control parameters. The dynamic solutions in the periodic, quasiperiodic, and chaotic forms are captured with the help of time history, phase portraits, and Poincare maps showing the influence of internal resonance.


2013 ◽  
Vol 10 (5) ◽  
pp. 2867-2884 ◽  
Author(s):  
S. Wooldridge

Abstract. That corals skeletons are built of aragonite crystals with taxonomy-linked ultrastructure has been well understood since the 19th century. Yet, the way by which corals control this crystallization process remains an unsolved question. Here, I outline a new conceptual model of coral biomineralisation that endeavours to relate known skeletal features with homeostatic functions beyond traditional growth (structural) determinants. In particular, I propose that the dominant physiological driver of skeletal extension is night-time hypoxia, which is exacerbated by the respiratory oxygen demands of the coral's algal symbionts (= zooxanthellae). The model thus provides a new narrative to explain the high growth rate of symbiotic corals, by equating skeletal deposition with the "work-rate" of the coral host needed to maintain a stable and beneficial symbiosis. In this way, coral skeletons are interpreted as a continuous (long-run) recording unit of the stability and functioning of the coral–algae endosymbiosis. After providing supportive evidence for the model across multiple scales of observation, I use coral core data from the Great Barrier Reef (Australia) to highlight the disturbed nature of the symbiosis in recent decades, but suggest that its onset is consistent with a trajectory that has been followed since at least the start of the 1900s. In concluding, I outline how the proposed capacity of cnidarians (which includes modern reef corals) to overcome the metabolic limitation of hypoxia via skeletogenesis also provides a new hypothesis to explain the sudden appearance in the fossil record of calcified skeletons at the Precambrian–Cambrian transition – and the ensuing rapid appearance of most major animal phyla.


2021 ◽  
Vol 1 (2) ◽  
Author(s):  
Piotr MAŁKOWSKI ◽  
Zbigniew NIEDBALSKI ◽  
Łukasz BEDNAREK

Ensuring the stability of mining excavations is a crucial aspect of underground mining. For thispurpose, appropriate shapes, dimensions, and support of workings are designed for the given mining andgeological conditions. However, for the proper assessment of the adequacy of the used technical solutions,and the calibration of the models used in the support design, it is necessary to monitor the behavior of theexcavation. It should apply to the rock mass and the support. The paper presents the automatic systemdesigned for underground workings monitoring, and the example of its use in the heading. Electronicdevices that measure the rock mass movements in the roof, the load on the standing support, and on bolts,the stress in the rock mass, are connected to the datalogger and can collect data for a long of time withoutany maintenance, also in hard-to-reach places. This feature enables the system to be widely used, inparticular, in excavations in the vicinity of exploitation, goafs, or in the area of a liquidated exploitationfield.


2016 ◽  
Vol 2016 ◽  
pp. 1-8 ◽  
Author(s):  
Wanyong Wang ◽  
Lijuan Chen

A delayed epidemic model with nonlinear incidence rate which depends on the ratio of the numbers of susceptible and infectious individuals is considered. By analyzing the corresponding characteristic equations, the effects of time delay on the stability of the equilibria are studied. By choosing time delay as bifurcation parameter, the critical value of time delay at which a Hopf bifurcation occurs is obtained. In order to derive the normal form of the Hopf bifurcation, an extended method of multiple scales is developed and used. Then, the amplitude of bifurcating periodic solution and the conditions which determine the stability of the bifurcating periodic solution are obtained. The validity of analytical results is shown by their consistency with numerical simulations.


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