DIVERSITY OF GRACILARIACEAE (RHODOPHYTA) IN BRAZIL: INTEGRATING MORPHOLOGICAL AND MOLECULAR DATA

Phytotaxa ◽  
2021 ◽  
Vol 496 (1) ◽  
pp. 1-53
Author(s):  
GOIA DE MATTOS LYRA ◽  
JOSÉ MARCOS DE CASTRO NUNES ◽  
EDILENE MARIA DOS SANTOS PESTANA ◽  
JOÃO CARLOS GAMA DE MATOS ◽  
TAIARA AGUIAR CAIRES ◽  
...  
Keyword(s):  
Economic Value ◽  
Molecular Data ◽  
Tropical Species ◽  
Brazilian Coast ◽  
Type Specimens ◽  
Mitochondrial Coi ◽  
Dichotomous Key ◽  
Identification Of Species ◽  
Morphological And Molecular Data ◽  
Selection Of Species

The Gracilariaceae comprises 242 mainly tropical species, including some with significant economic value for the food and pharmaceutical industry. Accurate taxonomy is crucial for the selection of species for cultivation. However, species identification is still challenging taxonomists. Nineteen species of Gracilariaceae have so far been referred to the Brazilian coast. We describe this diversity across approximately 32 degrees of latitude, using mitochondrial (COI-5P) and plastid (UPA and rbcL) markers in species delimitation analyses (ABGD and SPN). We provide phylogenetic (based on a concatenated three-genes tree and a taxa rich rbcL tree) and barcoding analyses from a broad and partially original collection combined with morphoanatomical data, including information resulting from analyses of type specimens and topotype material. We identified twenty-five specific entities occurring on the Brazilian coast, including four new species yet to be described. Spermatangial arrangements and aspects of thallus morphology were the most useful characters for species and genera delimitation, while characters based on the anatomy of the cystocarp overlap. Our morphological analyses demonstrate the lack of exclusive characters that justify the recently proposed Gracilariaceae infrafamilial categories, and therefore we use in this work the Gracilaria sensu lato genus concept. We provide descriptions, illustrations and a dichotomous key for the identification of species occurring in Brazil.

Systematics of big-eyed bats, genus Chiroderma Peters, 1860 (Chiroptera: Phyllostomidae)

Zootaxa ◽  
2020 ◽  
Vol 4846 (1) ◽  
pp. 1-93
Author(s):  
GUILHERME S. T. GARBINO ◽  
BURTON K. LIM ◽  
VALÉRIA DA C. TAVARES
Keyword(s):  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Wide Distribution ◽  
Northeastern Brazil ◽  
Type Specimens ◽  
Mitochondrial Coi ◽  
Western Mexico ◽  
Eastern Brazil ◽  
Andean South America ◽  
Morphological And Molecular Data

We present a revision of the Neotropical bat genus Chiroderma, commonly known as big-eyed bats. Although species of Chiroderma have a wide distribution from western México to southern Brazil, species limits within Chiroderma are not clearly defined, as attested by identification errors in the literature, and there is no comprehensive revision of the genus that includes morphological and molecular data. Our review is based on phylogenetic analyses of two mitochondrial (COI and CYTB) and two nuclear (RAG2 and DBY) genes, coalescence analyses of mitochondrial genes, and morphological analyses including type specimens of all named taxa. We recognize seven species in three clades: the first clade includes (1) C. scopaeum Handley, 1966, endemic to western México and previously considered a subspecies of C. salvini; and (2) C. salvini Dobson, 1878, a taxon associated with montane forests, distributed from México to Bolivia; the second clade includes (3) C. improvisum Baker and Genoways, 1976, endemic to the Lesser Antilles, and (4) C. villosum Peters, 1860, widely distributed on the continental mainland and polytypic, with subspecies C. v. villosum and C. v. jesupi; and the third clade includes (5) the polytypic C. doriae Thomas, 1891, with C. d. doriae distributed in eastern Brazil and Paraguay, and C. d. vizottoi, occurring in northeastern Brazil; (6) C. trinitatum Goodwin, 1958, distributed from Trinidad to Amazonia; and (7) C. gorgasi Handley, 1960, distributed from Honduras to trans-Andean South America, previously considered a subspecies of C. trinitatum. 

scholarly journals The Tonkin weakfish, Cynoscion similis (Sciaenidae, Perciformes), an endemic species of the Amazonas-Orinoco Plume

2019 ◽  
Vol 49 (3) ◽  
pp. 197-207
Author(s):  
Rodrigo Antunes CAIRES ◽  
Wagner. C. R. dos SANTOS ◽  
Leonardo MACHADO ◽  
Claudio OLIVEIRA ◽  
Najila N. C. D. CERQUEIRA ◽  
...  
Keyword(s):  
Endemic Species ◽  
Fish Fauna ◽  
Molecular Data ◽  
Conservation Strategies ◽  
Brazilian Coast ◽  
Accurate Data ◽  
Identification Of Species ◽  
The Common ◽  
Morphological And Molecular Data ◽  
Effective Conservation

ABSTRACT Despite its importance in biogeographical, ecological, and commercial terms, the fish fauna of the northern Brazilian coast is still poorly known, representing the least sampled portion of the Brazilian Exclusive Economic Zone. We collected Tonkin weakfish, Cynoscion similis specimens during extensive surveys of the northern Brazilian coast and concluded that C. similis is common in this region. While the species had not previously been reported for the northern Brazilian state of Pará, it may have been recorded in studies of industrial fisheries, being identified only as Cynoscion sp. or by the common name pescada negra. This reinforces the need for the reliable taxonomical identification of species, to guarantee the collection of accurate data on ecology and fisheries, and ultimately, support the development of effective conservation strategies. Here we provide additional morphological and molecular data to distinguish Cynoscion similis from the closely related Cynoscion jamaicensis, and other congeners.

Two new freshwater planarian species (Platyhelminthes: Tricladida: Dugesiidae) partially sympatric in Argentinean Patagonia

2021 ◽  
pp. 269-278
Author(s):  
M. Lenguas Francavilla ◽  
L. Negrete ◽  
A. Martínez-Aquino ◽  
C. Damborenea ◽  
F. Brusa
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Data ◽  
Neotropical Region ◽  
Free Living ◽  
Mitochondrial Coi ◽  
Argentinean Patagonia ◽  
The Family ◽  
Taxonomic Approach ◽  
Morphological And Molecular Data ◽  
Endemic Flora

Girardia Ball, 1974 is the most diverse and widely distributed genus of the family Dugesiidae (Platyhelminthes: Continenticola) in the Neotropical region. Seven out of the 52 species of the genus are known for Argentina. The Somuncurá Plateau is a region in northern Patagonia with several endemic flora and fauna, but little is known about the free-living Platyhelminthes. We describe two new species of Girardia partially inhabiting in sympatry in the Somuncurá Plateau: Girardia somuncura sp. nov. and Girardia tomasi sp. nov. The identification criteria that we followed was an integrative taxonomic approach based on morphological and molecular data. Thus, we used anatomical features focused on the reproductive system, together with a phylogenetic analysis, using a mitochondrial (COI barcode region) genetic marker. This study is the first phylogenetic analysis of the genus Girardia in which we include the southernmost representatives of America here described, thus making it possible to incorporate them in global phylogenies.

scholarly journals Fungia fungites (Linnaeus, 1758) (Scleractinia, Fungiidae) is a species complex that conceals large phenotypic variation and a previously unrecognized genus

2020 ◽  
Vol 89 (2) ◽  
pp. 188-209
Author(s):  
Yutaro Oku ◽  
Kenji Iwao ◽  
Bert W. Hoeksema ◽  
Naoko Dewa ◽  
Hiroyuki Tachikawa ◽  
...  
Keyword(s):  
Species Complex ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Scleractinian Corals ◽  
Type Specimens ◽  
Mitochondrial Coi ◽  
Clade B ◽  
Unknown Species ◽  
Molecular Phylogenetic ◽  
Morphological Differences

Recent molecular phylogenetic analyses of scleractinian corals have resulted in the discovery of cryptic lineages. To understand species diversity in corals, these lineages need to be taxonomically defined. In the present study, we report the discovery of a distinct lineage obscured by the traditional morphological variation of Fungia fungites. This taxon exists as two distinct morphs: attached and unattached. Molecular phylogenetic analyses using mitochondrial COI and nuclear ITS markers as well as morphological comparisons were performed to clarify their phylogenetic relationships and taxonomic positions. Molecular data revealed that F. fungites consists of two genetically distinct clades (A and B). Clade A is sister to a lineage including Danafungia scruposa and Halomitra pileus, while clade B formed an independent lineage genetically distant from these three species. The two morphs were also found to be included in both clades, although the attached morph was predominantly found in clade A. Morphologically, both clades were statistically different in density of septal dentation, septal number, and septal teeth shape. These results indicate that F. fungites as presently recognized is actually a species complex including at least two species. After checking type specimens, we conclude that specimens in clade A represent true F. fungites with two morphs (unattached and attached) and that all of those in clade B represent an unknown species and genus comprising an unattached morph with only one exception. These findings suggest that more unrecognized taxa with hitherto unnoticed morphological differences can be present among scleractinian corals.

Gelidium guimaraesiae sp. nov. (Gelidiaceae, Rhodophyta) from the Western Atlantic segregated from G. floridanum by morphological and molecular evidence

Phytotaxa ◽  
2019 ◽  
Vol 388 (4) ◽  
pp. 275 ◽  
Author(s):  
BEATRIZ BRUNELLI ◽  
DANIELA MILSTEIN ◽  
SUNG M. BOO ◽  
MUTUE T. FUJII
Keyword(s):  
Dna Sequences ◽  
Sequence Divergence ◽  
Molecular Data ◽  
Brazilian Coast ◽  
Molecular Evidence ◽  
Similar Species ◽  
Western Atlantic ◽  
Gelidium Floridanum ◽  
Morphological And Molecular Data ◽  
A New Species

The Gelidium species are susceptible to a great phenotypic plasticity. In this genus, studies integrating morphological and molecular data have been increasingly used to define species. To date nine Gelidium species are reported along the Brazilian coast. Gelidium floridanum is the most frequently recorded species in Brazilian but it is also often confused with morphologically similar species, especially in the field or when reproductive structures are absent. In this study we analyzed specimens from Brazil previously identified as G. floridanum based on the morphological and molecular data (cox1 and rbcL DNA sequences). Newly collected specimens from Brazil showed a DNA sequence divergence from G. floridanum in the order of 1.0–1.4% for rbcL and 4.2% for cox1, enough to be considered a new species, here described as Gelidium guimaraesiae sp. nov.

Morphological and molecular study of the torrent catfishes (Sisoridae: Glyptosterninae) of Bhutan including the description of five new species

Zootaxa ◽  
2018 ◽  
Vol 4476 (1) ◽  
pp. 40
Author(s):  
RYAN J. THONI ◽  
DHAN B. GURUNG
Keyword(s):  
New Species ◽  
Mitochondrial Gene ◽  
Nuclear Gene ◽  
Molecular Study ◽  
Molecular Data ◽  
Cyt B ◽  
Dichotomous Key ◽  
Morphological And Molecular Data

Torrent catfishes of the subfamily Glyptosterninae from Bhutan are examined based on morphological and molecular data. Five new species are described: Creteuchiloglanis bumdelingensis sp. nov., Exostoma mangdechhuensis sp. nov., Parachiloglanis benjii sp. nov., P. dangmechhuensis sp. nov., and P. drukyulensis sp. nov. Molecular data derived from the mitochondrial gene Cyt b and the nuclear gene RAG2 recovered relationships within Parachiloglanis and the Glyptosterninae. A dichotomous key to the Glyptosterninae of Bhutan is provided.

A taxonomic review of the genera Boonea, Chrysallida, Parthenina, Ivara, Fargoa, Mumiola, Odostomella and Trabecula (Gastropoda, Pyramidellidae, Odostomiinae) from Brazil

Zootaxa ◽  
2009 ◽  
Vol 2049 (1) ◽  
pp. 39-66 ◽  
Author(s):  
ALEXANDRE DIAS PIMENTA ◽  
RICARDO SILVA ABSALÃO ◽  
CINTIA MIYAJI
Keyword(s):  
New Species ◽  
Molecular Data ◽  
Brazilian Coast ◽  
Similar Species ◽  
New Combinations ◽  
Taxonomic Review ◽  
Lack Of Information ◽  
Morphological And Molecular Data ◽  
One New Species

The genera Boonea Robertson, 1978, Chrysallida Carpenter, 1856, Fargoa Bartsch, 1909, Ivara Dall & Bartsch, 1903, Mumiola A. Adams, 1863, Odostomella Bucquoy, Dautzenberg & Dollfus, 1883, Parthenina Bucquoy, Dautzenberg & Dollfus, 1883 and Trabecula Dall & Bartsch, 1909 from Brazil are reviewed. Boonea jadisi (Olsson & McGinty, 1958), Boonea seminuda (C. B. Adams, 1839), Chrysallida gemmulosa C. B. Adams, 1850, Ivara terryi (Olsson & McGinty, 1958), Fargoa bushiana Bartsch, 1909, Mumiola gradatula (Mörch, 1876) and Odostomella carceralis Pimenta, Absalão & Alencar, 2000 are confirmed to occur in Brazil. We also present the first records of Parthenina varia (Odé, 1993), Odostomella fonteini (Jong & Coomans, 1988) and Trabecula krumpermanni (Jong & Coomans, 1988) from the region, all, new combinations. Two species, previously reported from the Brazilian coast, could not be confirmed: Boonea bisuturalis (Say, 1822) and Boonea impressa (Say, 1822). Odostomella cf. doliolum (Philippi, 1844) and Parthenina cf. interspatiosa (Linden & Eikenboom, 1992), originally described from the eastern Atlantic, are here recorded from Brazil, although their status remains dubious because of lack of information on their biology and due to lack of morphological and molecular data. One new species is described: Boonea scymnocelata, which can be distinguished from the similar species B. seminuda by its smaller size and immersed protoconch, with no visible nucleus.

scholarly journals The Genus Leccinum (Boletaceae, Boletales) from China Based on Morphological and Molecular Data

2021 ◽  
Vol 7 (9) ◽  
pp. 732
Author(s):  
Xin Meng ◽  
Geng-Shen Wang ◽  
Gang Wu ◽  
Pan-Meng Wang ◽  
Zhu L. Yang ◽  
...  
Keyword(s):  
New Species ◽  
Color Change ◽  
Molecular Data ◽  
Line Drawings ◽  
Important Group ◽  
Microscopic Features ◽  
Identification Of Species ◽  
Greenish Blue ◽  
Morphological And Molecular Data ◽  
Three New Species

Leccinum is one of the most important groups of boletes. Most species in this genus are ectomycorrhizal symbionts of various plants, and some of them are well-known edible mushrooms, making it an exceptionally important group ecologically and economically. The scientific problems related to this genus include that the identification of species in this genus from China need to be verified, especially those referring to European or North American species, and knowledge of the phylogeny and diversity of the species from China is limited. In this study, we conducted multi-locus (nrLSU, tef1-α, rpb2) and single-locus (ITS) phylogenetic investigations and morphological observisions of Leccinum from China, Europe and North America. Nine Leccinum species from China, including three new species, namely L. album, L.parascabrum and L.pseudoborneense, were revealed and described. Leccinum album is morphologically characterized by the white basidioma, the white hymenophore staining indistinct greenish blue when injured, and the white context not changing color in pileus but staining distinct greenish blue in the base of the stipe when injured. Leccinumparascabrum is characterized by the initially reddish brown to chestnut-brown and then pale brownish to brown pileus, the white to pallid and then light brown hymenophore lacking color change when injured, and the white context lacking color change in pileus but staining greenish blue in the base of the stipe when injured. Leccinumpseudoborneense is characterized by the pale brown to dark brown pileus, the initially white and then brown hymenophore lacking color change when injured, and the white context in pileus and stipe lacking color change in pileus but staining blue in stipe when bruised. Color photos of fresh basidiomata, line drawings of microscopic features and detailed descriptions of the new species are presented.

A new species of Aegla Leach, 1820 (Crustacea, Anomura) from the Iguaçu River basin, Brazil

Zootaxa ◽  
2018 ◽  
Vol 4527 (3) ◽  
pp. 335 ◽  
Author(s):  
FERNANDA POLLI PÁEZ ◽  
INGRID COSTA MARÇAL ◽  
LENICE SOUZA-SHIBATTA ◽  
RAFAEL AUGUSTO GREGATI ◽  
SILVIA HELENA SOFIA ◽  
...  
Keyword(s):  
New Species ◽  
River Basin ◽  
Morphological Characteristics ◽  
Molecular Data ◽  
Southern Brazil ◽  
Mitochondrial Coi ◽  
Interspecific Distance ◽  
Morphological And Molecular Data ◽  
A New Species ◽  
Iguaçu River

A new species of aeglid crab, Aegla okora n. sp., is described. This species was found in the Iguaçu River basin in Paraná state, southern Brazil. Aegla okora n. sp. was discriminated based on morphological and molecular data (mitochondrial COI). Morphologically, the new species differs from congeners of the same river basin by the presence of a trapezoidal areola and the ventromesial border of the ischium having three tubercles, besides other exclusive additional morphological characteristics. Molecular results demonstrated that there is no overlap between the intraspecific distances of Aegla okora n. sp. and the interspecific distance of other species of Aegla added to the analysis, confirming the separation of species and increasing the known diversity of the Iguaçu River basin. 

The identity of some specimens previously (mis)identified as Rhinoleucophenga obesa (Loew) (Diptera: Drosophilidae) in Brazil, based on morphological and molecular data, with implications on distribution

Zootaxa ◽  
2019 ◽  
Vol 4656 (2) ◽  
pp. 310-334
Author(s):  
JEAN LUCAS POPPE ◽  
MARCO SILVA GOTTSCHALK ◽  
MARÍNDIA DEPRÁ ◽  
HERMES JOSÉ SCHMITZ ◽  
VERA LÚCIA SILVA VALENTE
Keyword(s):  
Sibling Species ◽  
The United States ◽  
Molecular Data ◽  
Neotropical Region ◽  
Type Specimens ◽  
Widespread Species ◽  
Morphological Differences ◽  
Morphological And Molecular Data ◽  
First Time ◽  
Species Being

Rhinoleucophenga Hendel is an endemic genus of the New World with most species recorded in Brazil. Rhinoleucophenga obesa (Loew) seemed to be the most widespread species, being recorded in the United States of America, Mexico and Brazil. In the Neotropical region, identifications of R. obesa were commonly based on the description of non-type specimens determined by Costa Lima (1935) and Malogolowkin (1946), although their identities were doubtful. However, the recent redescription of R. obesa from the type-series from Texas, USA, confirmed a long period of misidentifications and a new species, R. cantareira Vilela & Bächli, was proposed based on Brazilian specimens. Thus, review of morphological and molecular traits of specimens previously identified as R. obesa in Neotropical biomes are necessary to check the identity and distribution of a group of sibling species: R. obesa, R. cantareira, R. gigantea (Thomson), R. pallida Hendel and R. pampeana Poppe et al. In the present paper, specimens previously determined as R. obesa, sampled in different Brazilian localities, were compared by morphological and molecular traits. Plates of female terminalia of R. cantareira and R. gigantea are presented for the first time. The spermathecal capsules (as well as the male epandrium) revealed useful characteristics to differentiate those species; these morphological differences were corroborated by a sequence fragment of COI. The specimens on which were based the descriptions of Rhinoleucophenga obesa sensu Costa Lima (1935) and sensu Malogolowkin (1946) were reviewed and confirmed as R. cantareira. Other Brazilian specimens from different localities, previously misidentified as R. obesa, were determined as R. gigantea or R. cantareira, with new records for both species. Therefore, the present study corresponds to the advance of identity definition and distribution of sibling species of Rhinoleucophenga commonly sampled in Neotropical inventory studies. 

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