scholarly journals Monoclonal antibodies detect receptor-induced binding sites in Glu-plasminogen

Blood ◽  
2011 ◽  
Vol 118 (6) ◽  
pp. 1653-1662 ◽  
Author(s):  
Jaena Han ◽  
Nagyung Baik ◽  
Kee-Hwan Kim ◽  
Jian-Ming Yang ◽  
Gye Won Han ◽  
...  

Abstract When Glu-plasminogen binds to cells, its activation to plasmin is markedly enhanced compared with the reaction in solution, suggesting that Glu-plasminogen on cell surfaces adopts a conformation distinct from that in solution. However, direct evidence for such conformational changes has not been obtained. Therefore, we developed anti-plasminogen mAbs to test the hypothesis that Glu-plasminogen undergoes conformational changes on its interaction with cells. Six anti-plasminogen mAbs (recognizing 3 distinct epitopes) that preferentially recognized receptor-induced binding sites (RIBS) in Glu-plasminogen were obtained. The mAbs also preferentially recognized Glu-plasminogen bound to the C-terminal peptide of the plasminogen receptor, Plg-RKT, and to fibrin, plasmin-treated fibrinogen, and Matrigel. We used trypsin proteolysis, immunoaffinity chromatography, and tandem mass spectrometry and identified Glu-plasminogen sequences containing epitopes recognized by the anti-plasminogen-RIBS mAbs: a linear epitope within a domain linking kringles 1 and 2; a nonlinear epitope contained within the kringle 5 domain and the latent protease domain; and a nonlinear epitope contained within the N-terminal peptide of Glu-plasminogen and the latent protease domain. Our results identify neoepitopes latent in soluble Glu-plasminogen that become available when Glu-plasminogen binds to cells and demonstrate that binding of Glu-plasminogen to cells induces a conformational change in Glu-plasminogen distinct from that of Lys-Pg.

The Analyst ◽  
2019 ◽  
Vol 144 (11) ◽  
pp. 3518-3524 ◽  
Author(s):  
Dababrata Paul ◽  
Adrien Marchand ◽  
Daniela Verga ◽  
Marie-Paule Teulade-Fichou ◽  
Sophie Bombard ◽  
...  

Tandem mass spectrometry: native top-down sequencing by electron photodetachment dissociation (EPD) reveals ligand binding sites on DNA G-quadruplexes.


2011 ◽  
Vol 50 (16) ◽  
pp. 7769-7778 ◽  
Author(s):  
Jean-Yves Salpin ◽  
Sébastien Guillaumont ◽  
Daniel Ortiz ◽  
Jeanine Tortajada ◽  
Philippe Maître

Talanta ◽  
2017 ◽  
Vol 170 ◽  
pp. 432-440 ◽  
Author(s):  
Jana Oklestkova ◽  
Danuše Tarkowská ◽  
Luděk Eyer ◽  
Tomáš Elbert ◽  
Aleš Marek ◽  
...  

Biochemistry ◽  
2014 ◽  
Vol 53 (43) ◽  
pp. 6754-6765 ◽  
Author(s):  
Xiao Zhou ◽  
Caitlin Mester ◽  
Paul M. Stemmer ◽  
Gavin E. Reid

2013 ◽  
Vol 304 (4) ◽  
pp. C370-C381 ◽  
Author(s):  
Steven J. Kehl ◽  
David Fedida ◽  
Zhuren Wang

The effect of external barium ions on rat Kv4.2 channels expressed in HEK293 cells was investigated using whole cell, voltage-clamp recordings to determine its mechanism of action as well as its usefulness as a tool to probe the permeation pathway. Ba2+ caused a concentration-dependent inhibition of current that was antagonized by increasing the external concentration of K+ ([K+]o), and the concentration and time dependence of the inhibition were well fitted by a model involving two binding sites aligned in series. Recovery from current inhibition was enhanced by increasing the intensity, duration, or frequency of depolarizing steps or by increasing [K+]o. These properties are consistent with the conclusion that Ba2+ is a permeant ion that, by virtue of a stable interaction with a deep pore site, is able to block conduction. This blocking action was subsequently exploited to gain insights into the pore configuration in different channel states. In addition to blocking one or more states populated by brief depolarizing pulses to 80 mV, Ba2+ blocked closed channels [the membrane voltage ( Vm) = −80 mV] and closed-inactivated channels ( Vm = −40 mV). Interestingly, the block of closed-inactivated channels was faster and more complete than for closed channels, which we interpret to mean that conformational changes underlying closed-state inactivation (CSI) enhance Ba2+ binding and that the outer pore mouth remains patent during CSI. This provides the first direct evidence that an inactivation process involving a constriction of the outer pore mouth does not account for CSI in Kv4.2.


Sign in / Sign up

Export Citation Format

Share Document