scholarly journals Interferon-Gamma Induced Changes in Gene Expression Dramatically Alter Neutrophil Phenotype

Blood ◽  
2018 ◽  
Vol 132 (Supplement 1) ◽  
pp. 2398-2398
Author(s):  
Michael Ellison ◽  
Natalie Briones ◽  
Angelina Baroffio ◽  
John Murphy ◽  
Katherine Gowan ◽  
...  

Abstract Interferon-gamma (IFN-γ) is a cytokine with powerful immunoregulatory effects. Most of these have been documented within the adaptive immune system and less has been reported about its effects on neutrophil function. Furthermore, most neutrophil studies have evaluated the effect of IFN- γ on mature cells isolated from peripheral blood thus potentially missing effects induced by its action on maturing neutrophils in the bone marrow. The clinical use of IFN-γ has been driven by these data and the clinical findings that administration of this cytokine to patients with Chronic Granulomatous Disease results in decreased incidence of severe infections without correcting the defect in phagocyte Nox2 activity. To determine the in vivo effects on neutrophils maturing in the marrow under the influence of this cytokine, we studied healthy human volunteers receiving IFN-γ at single escalating doses of 10, 25, 50, and 100 mcg/m2. Blood samples were obtained before and 4, 8, 12, 24, 36, 48, 72, and 96 hours after the administration. Plasma was stored for IFN-γ, IL-10 and neopterin determination by ELISA. Additionally, neutrophils were isolated from heparinized whole blood and superoxide anion generation after stimulation with PMA (200 ng/ml) and fMLF (1µM) was measured as SOD inhibitable cytochrome c reduction. RNA was isolated from neutrophils by standard techniques and genome wide changes in transcription were measured using Affymetrix gene chips. IFN-gamma concentrations in plasma spiked transiently after its administration and the magnitude and persistence of the resulting peaks were dose dependent. Levels of IL-10 and neopterin, two molecules known to respond to IFN-g, also exhibited time and dose dependent increases in plasma levels albeit with different kinetics; IL-10 responded with sharp peaks similar to the IFN- profiles, but neopterin showed slower developing and longer lasting increases. Superoxide anion generation by neutrophils in response to fMLF and PMA was quantitatively enhanced early after administration of IFN-γ returning to baseline by the end of the observation period. The increase in the respiratory burst exhibited a dose response with a plateau at 50 mcg/m2. Marked changes in gene expression were noted and, using the criteria of a 2-fold change over baseline, 866 genes showed increases and 1909 genes exhibited decreases in expression. The changes occurred rapidly after administration returning back towards baseline by 24-36 hours. Both dose dependent increases and decreases were observed. As expected, a number of genes directly associated with neutrophil function were increased such as Nox2 components (CYBB, NCF1), Fc receptors (FCGR1A, FCGR1B), and innate immune receptors including TLR5, TLR8 and LY96. Strikingly, dramatic changes were noted in the genes for proteins in MHCII and MCHI systems, guanylate binding proteins, and the chemokine receptor, CXCR4. In addition, the expression of GTP Cyclohydrolase 1 (GCH1), a rate limiting enzyme in the tetrahydrobiopterin (BH4) biosynthetic pathway, was increased 18-fold after IFN-γ administration. Since BH4 is a cofactor in nitric oxide (NO) synthases we speculated that increased GCH1 could enhance NO production in neutrophils. The upregulation of this pathway in neutrophils was confirmed with a demonstration that NO generation in neutrophil lysates spiked from low levels to peak 4-8 hours after IFN administration before returning toward baseline after 36 hours. The generation of NO as well as other changes in the neutrophil phenotype may provide compensatory strategies to afford more robust function to the cell limited by genetic defects of CGD or other neutrophil dysfunction disorders. These results demonstrate that administration of IFN-γ enhances classic neutrophil function and also induces previously under or unappreciated neutrophil functions. Under the influence of IFN-γ, the neutrophil alters its functional phenotype to include novel strategies that enhance its role in host defense and interaction with the adaptive immune system. Understanding these effects of IFN- γ will help define its clinical effects in CGD and extend its possible uses to other diseases. Disclosures Ambruso: Horizon Pharma Ireland Ltd: Other: Educational Consulting.

Blood ◽  
2016 ◽  
Vol 128 (22) ◽  
pp. 1026-1026
Author(s):  
Daniel R. Ambruso ◽  
Michael A Ellison ◽  
Natalie Briones ◽  
Angelina Baroffio

Abstract Introduction: Most information about the immunoregulatory functions of INF-γ has focused on the interaction with the adaptive immune system and less is reported about neutrophil function. Furthermore, the majority of studies with neutrophils evaluate the effects of INF-γ on differentiated cells. The clinical use of IFN-γ has been driven by these data and the clinical findings that administration of this cytokine to patients with Chronic Granulomatous Disease results in decreased incidence of severe infections although the defect in Nox2 activity is not altered. To determine the in vivoeffects on myeloid cells developed under the influence of this cytokine, we evaluated neutrophils from healthy human subjects receiving IFN-γ. Methods: Healthy human volunteers were administered IFN-γ subcutaneously under an FDA approved IND and a protocol approved by the COMIRB at the University of Colorado. Healthy adults between 18 and 60 years of age with no history of recent infections were enrolled. IFN-γ, at single escalating doses of 10, 25, 50, and 100 mcg. /m2, was given subcutaneously at weekly intervals. Blood samples were obtained before and 4, 8, 12, 24, 36, 48, 72, and 96 hrs. after the administration. Plasma was stored for IL-10 and Neopterin levels assayed by ELISA techniques. Neutrophils were isolated from heparinized whole blood by Dextran sedimentation, Ficoll Hypaque density gradient centrifugation, and hypotonic lysis of red blood cells. Superoxide anion generation after stimulation with PMA (200 ng/ml) and fMLF (1µM) was measured as SOD inhibitable cytochrome c reduction. RNA was isolated by standard techniques. Analysis of gene expression was completed after preparation of labelled cDNA and hybridization with microarrays (Affimetrix GeneChip), normalization, transformation and assignment of relative expression levels. Results for the first 5 subjects are summarized here. Results: Superoxide anion production was enhanced in response to both PMA and fMLF. For PMA there was a peak response at 12-24 hours after IFN-γ then a reduction back to baseline at the lowest dose. For the other three doses there appeared a second increase, not as great as the first, which peaked at 36-48 hours and returned to baseline by 96 hrs. The fMLF response was similar to PMA, but the early peak occurred at 8 hours and returned to baseline at the lower two doses. At 50 and 100 µ/m2 doses a second peak was seen at 24-48 hours with return to baseline by 96 hours. Dose response increases in both peaks of activity were noted for the first two doses and then reached a plateau for the higher doses of both stimuli. Plasma levels of IL-10 peaked at 4-8 hours returning to baseline by 12 hours for the first two doses of IFN-γ and 24 hours at the highest two doses. There was a clear cut dose response effect for peak levels achieved ranging from 60-80 pg./ml at the lowest dose of IFN-γ to 200-600 pg./ml at the highest. Neopterin levels peaked by 24 hours with all doses of IFN and continued to remain elevated to 72 hours moving back to baseline by 96 hours. Evaluation of gene expression is ongoing with analysis by patient, time and dose of IFN-γ with the goal of summarizing the results for the group as a whole. We will evaluate genes which show a 2-fold or greater increase and focus on those genes showing significant expression in a previously analyzed in vitro system of IFN-γ effect during neutrophil maturation of a myeloid cell line with DMSO. These include genes known to be involved in classical aspects of neutrophil function, i.e. transmigration, chemotaxis, phagocytosis and pathogen killing; genes involved in neutrophil clearance and homeostasis, including apoptosis; genes encoding innate immune receptors; and genes encoding guanylate binding proteins, a family of GTPases implicated in antimicrobial activity in different cell types. Conclusion: INF-γ has dramatic in-vivo effects on neutrophils. Dose and time related activities vary and results will help better define the optimal use of the drug. Understanding the nature of INF-γ related transcription activity will help define its clinical effects in CGD and extend the possible uses of this drug to other diseases. Disclosures No relevant conflicts of interest to declare.


Blood ◽  
2013 ◽  
Vol 122 (21) ◽  
pp. 2590-2590
Author(s):  
Frederik Otzen Bagger ◽  
Nicolas Rapin ◽  
Johan Jendholm ◽  
Helena Isabel Mora-Jensen ◽  
Niels Borregaard ◽  
...  

Abstract Introduction Cancer emerges as a consequence of multiple genetic aberrations that ultimately cause global changes in gene expression driving the malignant phenotype. Hence, identification of aberrantly expressed genes in cancer cells, as compared to their corresponding normal cells, provides information on the biology of the cancer as well as potential targets for therapeutic interventions. Here, we report an access-free internet platform for visualization of mRNA expression profiles in acute myeloid leukemia (AML) patient samples as compared to normal bone marrow (BM) populations representing successive stages of differentiation along the myeloid differentiation pathway. The internet platform allows for quick visualization of user selected genes in AML patients in either human or murine hematopoietic stem cells (HSC), myeloid hematopoietic progenitor cells (HPC) and their progeny, as well as mature cells of innate and adaptive immune system. Significantly, users can upload own microarray data to compare gene expression in their samples of interest to those available at the internet platform. Overall, our internet platform represents a powerful tool for studies of normal hematopoietic development as well as aberrantly expressed genes in AML and potentially other hematological malignancies. The web tool will be made available at http://servers.binf.ku.dk/hemaexplorer/ Methods Raw Affymetrix microarray data from our own repository and public available databases were normalized and batch corrected to build an integrated gene expression database for a series of normal hematopoietic cells and AML patient samples, at progressing stages of differentiation, which can be visualized directly or compared to external samples added by the user. A complete database of internal and user-supplied samples is build at each run of the analysis, using uniform transformation and correction parameters adjusted to ensure full integrity and comparability across all samples. The microarray database includes 44 highly purified sorted human normal blood samples and BM populations including HSCs, myeloid HPCs and their progeny, as well as mature cells of the innate and adaptive immune system. 10 samples were from public sources. In addition, our database includes microarray data from multiple AML studies (> 1000 samples across platforms) allowing for comparison of gene expression in WHO defined AML subclasses and normal hematopoietic cells. Results The main strength of the data-driven HemaExplorer 2.0 tool is the ability to quickly assess the main trends in how an AML sample diverges from normal cells during normal myeloid development. This can be accessed by specifying a gene of interest (Figure panel A-B. A user-supplied sample is marked in red in panel B) which provides interactive plots and hierarchical visualisations of gene expression where parameters including gene of interest, data source, and cell types can be selected and presented directly on the output figures usable for publications. Furthermore, a principal component analysis (PCA) plot can be performed, which allows for an unsupervised gene expression based mapping of user provided samples to the most closely related normal cell populations (figure panel C - here shown with cell lines commonly used in AML research). Discussion Several websites offer visualisation of gene expression in cells from the hematopoietic system, including Gene Expression Atlas (Nucl. Acids Res., 40, D1077–D1081) and our own HemaExplorer (Blood, 119(26), 6394-5 and Nucl. Acids Res. 41, D1034-D1039), without the possibility of external sample addition provided by the users. Gene Expression Commons (PLoS ONE 7(7), e40321) provides this option for public data, based on a common expression model. Here we offer the ability to add and compare unpublished microarray gene expression profiles to various types of normal blood and BM populations, in a ready-to-use platform normalized on single sample level, independently on the overall distribution of expression in a selected set of reference samples. Future efforts will include the ability to provide a standard differential expression analysis, comparing the user-supplied sample with a selection of the normal hematopoietic hierarchy. Furthermore, we aim to be able to offer a standalone version of the tool, which can be implemented internally on hospital servers, and expand the list of accepted microarray platforms. Disclosures: No relevant conflicts of interest to declare.


2016 ◽  
Vol 75 (3) ◽  
pp. 74-84 ◽  
Author(s):  
A.E. Abaturov ◽  
◽  
E.A. Agafonova ◽  
N.I. Abaturova ◽  
V.L. Babich ◽  
...  

2021 ◽  
Vol 8 (8) ◽  
pp. 2004979
Author(s):  
Jun‐Young Park ◽  
Sung Jean Park ◽  
Jun Young Park ◽  
Sang‐Hyun Kim ◽  
Song Kwon ◽  
...  

2021 ◽  
pp. 1-19
Author(s):  
Sonia George ◽  
Trevor Tyson ◽  
Nolwen L. Rey ◽  
Rachael Sheridan ◽  
Wouter Peelaerts ◽  
...  

Background: α-Synuclein (α-syn) is the predominant protein in Lewy-body inclusions, which are pathological hallmarks of α- synucleinopathies, such as Parkinson’s disease (PD) and multiple system atrophy (MSA). Other hallmarks include activation of microglia, elevation of pro-inflammatory cytokines, as well as the activation of T and B cells. These immune changes point towards a dysregulation of both the innate and the adaptive immune system. T cells have been shown to recognize epitopes derived from α-syn and altered populations of T cells have been found in PD and MSA patients, providing evidence that these cells can be key to the pathogenesis of the disease. Objective To study the role of the adaptive immune system with respect to α-syn pathology. Methods: We injected human α-syn preformed fibrils (PFFs) into the striatum of immunocompromised mice (NSG) and assessed accumulation of phosphorylated α-syn pathology, proteinase K-resistant α-syn pathology and microgliosis in the striatum, substantia nigra and frontal cortex. We also assessed the impact of adoptive transfer of naïve T and B cells into PFF-injected immunocompromised mice. Results: Compared to wildtype mice, NSG mice had an 8-fold increase in phosphorylated α-syn pathology in the substantia nigra. Reconstituting the T cell population decreased the accumulation of phosphorylated α-syn pathology and resulted in persistent microgliosis in the striatum when compared to non-transplanted mice. Conclusion: Our work provides evidence that T cells play a role in the pathogenesis of experimental α-synucleinopathy.


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