scholarly journals Biochar induced improvement in root system architecture enhances nutrient assimilation by cotton plant seedlings

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Lei Feng ◽  
Wanli Xu ◽  
Guangmu Tang ◽  
Meiying Gu ◽  
Zengchao Geng
Keyword(s):  
Root System ◽  
System Architecture ◽  
Fine Roots ◽  
Nitrogen Assimilation ◽  
Surface Soil ◽  
Soil Layer ◽  
Root System Architecture ◽  
Seedling Stage ◽  
Agronomic Efficiency ◽  
Surface Soil Layer

Abstract Background Raising nitrogen use efficiency of crops by improving root system architecture is highly essential not only to reduce costs of agricultural production but also to mitigate climate change. The physiological mechanisms of how biochar affects nitrogen assimilation by crop seedlings have not been well elucidated. Results Here, we report changes in root system architecture, activities of the key enzymes involved in nitrogen assimilation, and cytokinin (CTK) at the seedling stage of cotton with reduced urea usage and biochar application at different soil layers (0–10 cm and 10–20 cm). Active root absorption area, fresh weight, and nitrogen agronomic efficiency increased significantly when urea usage was reduced by 25% and biochar was applied in the surface soil layer. Glutamine oxoglutarate amino transferase (GOGAT) activity was closely related to the application depth of urea/biochar, and it increased when urea/biochar was applied in the 0–10 cm layer. Glutamic-pyruvic transaminase activity (GPT) increased significantly as well. Nitrate reductase (NR) activity was stimulated by CTK in the very fine roots but inhibited in the fine roots. In addition, AMT1;1, gdh3, and gdh2 were significantly up-regulated in the very fine roots when urea usage was reduced by 25% and biochar was applied. Conclusion Nitrogen assimilation efficiency was significantly affected when urea usage was reduced by 25% and biochar was applied in the surface soil layer at the seedling stage of cotton. The co-expression of gdh3 and gdh2 in the fine roots increased nitrogen agronomic efficiency. The synergistic expression of the ammonium transporter gene and gdh3 suggests that biochar may be beneficial to amino acid metabolism.

scholarly journals Biochar effect - mediated ammonium transporter genes and GDH may be the core of improvement nitrogen assimilation in cotton seedling

2020 ◽  
Author(s):  
Lei Feng ◽  
Guangmu Tang ◽  
Wanli Xu ◽  
Meiying Gu ◽  
Zengchao Geng
Keyword(s):  
Seedling Growth ◽  
Fine Roots ◽  
Nitrogen Assimilation ◽  
Surface Soil ◽  
Soil Layer ◽  
Assimilation Efficiency ◽  
Seedling Stage ◽  
Nitrogen Efficiency ◽  
Ammonium Transporter ◽  
Cotton Seedling

AbstractBiochar enhancement of nitrogen efficiency in crops is highly essential not only to reduce costs of agricultural production but also to conserve resources, lower energy consumption for products of these fertilizers, strengthen soil health, and eventually helps in slowing climate change; however nitrogen efficiency physiology by biochar effects is not clear. Here, we reported on the morphological, nitrogen metabolism and cytokinin, at seedling stage, under different layers of biochar and limited urea conditions grown in soil culture. Expression profile of miRNAs and AOB was further studied in fine and medium roots. It showed active root absorption area, fresh weight, and nitrogen agronomic efficiency responded significantly under biochar and reduction by 20% urea condition in the surface soil layer. Also, NR and GPT activity in fine roots remarkably increased with cytokinin, but decreased significantly in medium roots, meanwhile both NR and GDH activity did so. GOGAT activity was to be dependent with biochar and urea locations. In addition, AMT1;1, gdh3 and gdh2 in fine roots showed their up-regulation with reduction 20% urea and biochar. It revealed that co-expression of gdh3 and gdh2 in fine roots significantly affected nitrogen assimilation under reduction 20% urea with biochar on surface soil at seedling stage.HighlightsThe co-expression of ammonium transporter gene and GDH induced by biochar effect improves nitrogen efficiency and seedling growth.These data emphasizes the importance of effects of cytokinin on nitrate reductase activity closely related to the position under biochar condition, which is a key element of enhancement nitrogen assimilation efficiency in cotton seedling.Biochar addition applied into 0 to 10cm soil had a more positive effect on seedling growth than that into 10 to 20cm soil layers.

scholarly journals Effect of disturbance on fine root biomass in the Tropical moist forest of eastern Nepal

2013 ◽  
Vol 2 ◽  
pp. 10-16 ◽  
Author(s):  
Tilak Prasad Gautam ◽  
Tej Narayan Mandal
Keyword(s):  
Fine Roots ◽  
Root Biomass ◽  
Surface Soil ◽  
Fine Root ◽  
Soil Layer ◽  
Fine Root Biomass ◽  
Nitrogen Stock ◽  
Moist Forest ◽  
Surface Soil Layer ◽  
Disturbed Stand

Fine root biomass (<5 mm diameter) was estimated in 0-15 cm and 15- 30 cm soil depths of disturbed and undisturbed stands of tropical moist forest in eastern Nepal. The value of root mass was higher (4.28 t ha-1) in the undisturbed stand than the disturbed stand (2.04 t ha-1). The biomass of smaller fine roots (<2 mm diameter) was 1.51 and 3.2 t ha-1 in the disturbed and undisturbed stands respectively. Most of the fine roots were present in the surface soil layer (0-15 cm), in both the disturbed and undisturbed stands (67% in the disturbed and 64% in the undisturbed). The nitrogen stock in the fine roots was more (38.61 kg ha-1) in undisturbed stand than the disturbed stand (16.93 kg ha-1). More nitrogen was confined in the fine roots of <2 mm diameter in both undisturbed (28.8 kg ha-1) and disturbed (13.59 kg ha-1) stands. DOI: http://dx.doi.org/10.3126/njbs.v2i0.7484 Nepalese Journal of Biosciences 2 : 10-16 (2012)

Outflows of Organic Halide Precursors from Forest Regions

1989 ◽  
Vol 21 (12) ◽  
pp. 1877-1880 ◽  
Author(s):  
S. Saito ◽  
K. Hattori ◽  
T. Okumura
Keyword(s):  
Water Quality ◽  
River Basin ◽  
Surface Soil ◽  
Soil Layer ◽  
Water Quality Monitoring ◽  
Quality Monitoring ◽  
Deep Soil ◽  
Organic Halide ◽  
Forest Regions ◽  
Surface Soil Layer

Outflows of organic halide precursors (OXPs) from forest regions were studied in relation to water quality monitoring in the Yodo River basin. Firstly, the contribution of outflows from forest regions relative to the total was roughly estimated. Then equations for flows of these substances were formulated, divided into four different subflow categories: precipitation; throughfall; surface soil layer; and, deep soil layer. Finally, annual outflow loads were calculated for a test forest area.

scholarly journals Comprehensive Genome-Wide Association Analysis Reveals the Genetic Basis of Root System Architecture in Soybean

2020 ◽  
Vol 11 ◽  
Author(s):  
Waldiodio Seck ◽  
Davoud Torkamaneh ◽  
François Belzile
Keyword(s):  
Root System ◽  
System Architecture ◽  
Phenotypic Variation ◽  
Genetic Basis ◽  
Genome Wide Association Study ◽  
Primary Root ◽  
Root System Architecture ◽  
Genome Wide Association ◽  
Nucleotide Polymorphisms ◽  
Genome Wide

Increasing the understanding genetic basis of the variability in root system architecture (RSA) is essential to improve resource-use efficiency in agriculture systems and to develop climate-resilient crop cultivars. Roots being underground, their direct observation and detailed characterization are challenging. Here, were characterized twelve RSA-related traits in a panel of 137 early maturing soybean lines (Canadian soybean core collection) using rhizoboxes and two-dimensional imaging. Significant phenotypic variation (P &lt; 0.001) was observed among these lines for different RSA-related traits. This panel was genotyped with 2.18 million genome-wide single-nucleotide polymorphisms (SNPs) using a combination of genotyping-by-sequencing and whole-genome sequencing. A total of 10 quantitative trait locus (QTL) regions were detected for root total length and primary root diameter through a comprehensive genome-wide association study. These QTL regions explained from 15 to 25% of the phenotypic variation and contained two putative candidate genes with homology to genes previously reported to play a role in RSA in other species. These genes can serve to accelerate future efforts aimed to dissect genetic architecture of RSA and breed more resilient varieties.

scholarly journals Genome-wide association analysis unveils novel QTLs for seminal root system architecture traits in Ethiopian durum wheat

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Admas Alemu ◽  
Tileye Feyissa ◽  
Marco Maccaferri ◽  
Giuseppe Sciara ◽  
Roberto Tuberosa ◽  
...  
Keyword(s):  
Durum Wheat ◽  
Root System ◽  
System Architecture ◽  
Root Length ◽  
Dry Weight ◽  
Root System Architecture ◽  
High Density ◽  
Soil Conditions ◽  
Root Dry Weight ◽  
Seminal Roots

Abstract Background Genetic improvement of root system architecture is essential to improve water and nutrient use efficiency of crops or to boost their productivity under stress or non-optimal soil conditions. One hundred ninety-two Ethiopian durum wheat accessions comprising 167 historical landraces and 25 modern cultivars were assembled for GWAS analysis to identify QTLs for root system architecture (RSA) traits and genotyped with a high-density 90 K wheat SNP array by Illumina. Results Using a non-roll, paper-based root phenotyping platform, a total of 2880 seedlings and 14,947 seminal roots were measured at the three-leaf stage to collect data for total root length (TRL), total root number (TRN), root growth angle (RGA), average root length (ARL), bulk root dry weight (RDW), individual root dry weight (IRW), bulk shoot dry weight (SDW), presence of six seminal roots per seedling (RT6) and root shoot ratio (RSR). Analysis of variance revealed highly significant differences between accessions for all RSA traits. Four major (− log10P ≥ 4) and 34 nominal (− log10P ≥ 3) QTLs were identified and grouped in 16 RSA QTL clusters across chromosomes. A higher number of significant RSA QTL were identified on chromosome 4B particularly for root vigor traits (root length, number and/or weight). Conclusions After projecting the identified QTLs on to a high-density tetraploid consensus map along with previously reported RSA QTL in both durum and bread wheat, fourteen nominal QTLs were found to be novel and could potentially be used to tailor RSA in elite lines. The major RGA QTLs on chromosome 6AL detected in the current study and reported in previous studies is a good candidate for cloning the causative underlining sequence and identifying the beneficial haplotypes able to positively affect yield under water- or nutrient-limited conditions.

Changes induced by lead in root system architecture of Arabidopsis seedlings are mediated by PDR2-LPR1/2 phosphate dependent way

BioMetals ◽  
2021 ◽  
Author(s):  
Ricardo Ortiz-Luevano ◽  
José López-Bucio ◽  
Miguel Martínez-Trujillo ◽  
Lenin Sánchez-Calderón
Keyword(s):  
Root System ◽  
System Architecture ◽  
Root System Architecture

scholarly journals Root System Architecture Plasticity of Bread Wheat in Response to Oxidative Burst under Extended Osmotic Stress

Plants ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 939
Author(s):  
Omar Azab ◽  
Abdullah Al-Doss ◽  
Thobayet Alshahrani ◽  
Salah El-Hendawy ◽  
Adel M. Zakri ◽  
...  
Keyword(s):  
Oxidative Stress ◽  
Membrane Potential ◽  
Osmotic Stress ◽  
Root System ◽  
Bread Wheat ◽  
System Architecture ◽  
Mitochondrial Membrane ◽  
Root System Architecture ◽  
Root Tips ◽  
Scavenging Capacity

There is a demand for an increase in crop production because of the growing population, but water shortage hinders the expansion of wheat cultivation, one of the most important crops worldwide. Polyethylene glycol (PEG) was used to mimic drought stress due to its high osmotic potentials generated in plants subjected to it. This study aimed to determine the root system architecture (RSA) plasticity of eight bread wheat genotypes under osmotic stress in relation to the oxidative status and mitochondrial membrane potential of their root tips. Osmotic stress application resulted in differences in the RSA between the eight genotypes, where genotypes were divided into adapted genotypes that have non-significant decreased values in lateral roots number (LRN) and total root length (TRL), while non-adapted genotypes have a significant decrease in LRN, TRL, root volume (RV), and root surface area (SA). Accumulation of intracellular ROS formation in root tips and elongation zone was observed in the non-adapted genotypes due to PEG-induced oxidative stress. Mitochondrial membrane potential (∆Ψm) was measured for both stress and non-stress treatments in the eight genotypes as a biomarker for programmed cell death as a result of induced osmotic stress, in correlation with RSA traits. PEG treatment increased scavenging capacity of the genotypes from 1.4-fold in the sensitive genotype Gemmiza 7 to 14.3-fold in the adapted genotype Sakha 94. The adapted genotypes showed greater root trait values, ∆Ψm plasticity correlated with high scavenging capacity, and less ROS accumulation in the root tissue, while the non-adapted genotypes showed little scavenging capacity in both treatments, accompanied by mitochondrial membrane permeability, suggesting mitochondrial dysfunction as a result of oxidative stress.

Sign in / Sign up

Export Citation Format

Share Document