scholarly journals Segmentasi Citra Pembuluh Darah Retina Menggunakan Operasi Morfologi Iteratif

2021 ◽  
Vol 13 (1) ◽  
pp. 18-24
Author(s):  
Vita Nurdinawati ◽  
Atika Hendryani ◽  
Thareq Barasabha

Retinal vessel segmentation is part of the morphological extraction of retinal blood vessels that plays an essential role in medical image processing. Manual segmentation is possible to do, but it is time-consuming and requires special operators. Moreover, the possibility of variability between operators is vast. This study aims to answer the shortcomings of the manual segmentation process by automatically segmenting retinal blood vessels. The main contribution of this study is the use of a simple method to iteratively segment retinal blood vessels.  All processes in the segmentation are simulated using Matlab. The algorithm was evaluated by comparing the results of the automatic segmentation with 20 manually segmented images from the STARE dataset. The result show specificity 98.13%, accuracy 93.60%, sensitivity 56.42%, precision 80.48%, and the dice coefficient 64.06%. In conclusion, the automatic retinal blood vessel image segmentation process worked well.

2021 ◽  
Vol 12 (1) ◽  
pp. 403
Author(s):  
Lin Pan ◽  
Zhen Zhang ◽  
Shaohua Zheng ◽  
Liqin Huang

Automatic segmentation and centerline extraction of blood vessels from retinal fundus images is an essential step to measure the state of retinal blood vessels and achieve the goal of auxiliary diagnosis. Combining the information of blood vessel segments and centerline can help improve the continuity of results and performance. However, previous studies have usually treated these two tasks as separate research topics. Therefore, we propose a novel multitask learning network (MSC-Net) for retinal vessel segmentation and centerline extraction. The network uses a multibranch design to combine information between two tasks. Channel and atrous spatial fusion block (CAS-FB) is designed to fuse and correct the features of different branches and different scales. The clDice loss function is also used to constrain the topological continuity of blood vessel segments and centerline. Experimental results on different fundus blood vessel datasets (DRIVE, STARE, and CHASE) show that our method can obtain better segmentation and centerline extraction results at different scales and has better topological continuity than state-of-the-art methods.


Electronics ◽  
2021 ◽  
Vol 10 (18) ◽  
pp. 2297
Author(s):  
Toufique A. Soomro ◽  
Ahmed Ali ◽  
Nisar Ahmed Jandan ◽  
Ahmed J. Afifi ◽  
Muhammad Irfan ◽  
...  

Segmentation of retinal vessels plays a crucial role in detecting many eye diseases, and its reliable computerized implementation is becoming essential for automated retinal disease screening systems. A large number of retinal vessel segmentation algorithms are available, but these methods improve accuracy levels. Their sensitivity remains low due to the lack of proper segmentation of low contrast vessels, and this low contrast requires more attention in this segmentation process. In this paper, we have proposed new preprocessing steps for the precise extraction of retinal blood vessels. These proposed preprocessing steps are also tested on other existing algorithms to observe their impact. There are two steps to our suggested module for segmenting retinal blood vessels. The first step involves implementing and validating the preprocessing module. The second step applies these preprocessing stages to our proposed binarization steps to extract retinal blood vessels. The proposed preprocessing phase uses the traditional image-processing method to provide a much-improved segmented vessel image. Our binarization steps contained the image coherence technique for the retinal blood vessels. The proposed method gives good performance on a database accessible to the public named DRIVE and STARE. The novelty of this proposed method is that it is an unsupervised method and offers an accuracy of around 96% and sensitivity of 81% while outperforming existing approaches. Due to new tactics at each step of the proposed process, this blood vessel segmentation application is suitable for computer analysis of retinal images, such as automated screening for the early diagnosis of eye disease.


2021 ◽  
Vol 2070 (1) ◽  
pp. 012104
Author(s):  
Sushma Nagdeote ◽  
Sapna Prabhu

Abstract This paper deals with the new segmentation techniques for retinal blood vessels on fundus images. This technique aims at extracting thin vessels to reduce the intensity difference between thick and thin vessels. This paper proposes the modified UNet model by incorporating ResNet blocks into it which includes structured prediction. In this work we generate the visualization of blood vessels from retinal fundus image for two loss functions namely cross entropy loss and Dice loss where the network classifies several pixels simultaneously. The results shows higher accuracy by considering a much more expressive UNet algorithm and outperforms the past algorithms for Retinal Vessel Segmentation. The benefits of this approach will be demonstrated empirically.


2017 ◽  
pp. 2063-2081
Author(s):  
Ahmed Hamza Asad ◽  
Ahmad Taher Azar ◽  
Aboul Ella Hassanien

The automatic segmentation of blood vessels in retinal images is the crucial stage in any retina diagnosis systems. This article discussed the impact of two improvements to the previous baseline approach for automatic segmentation of retinal blood vessels based on the ant colony system. The first improvement is in features where the length of previous features vector used in segmentation is reduced to the half since four less significant features are replaced by a new more significant feature when applying the correlation-based feature selection heuristic. The second improvement is in ant colony system where a new probability-based heuristic function is applied instead of the previous Euclidean distance based heuristic function. Experimental results showed the improved approach gives better performance than baseline approach when it is tested on DRIVE database of retinal images. Also, the statistical analysis demonstrated that was no statistically significant difference between the baseline and improved approaches in the sensitivity (0.7388± 0.0511 vs. 0.7501±0.0385, respectively; P = 0.4335). On the other hand, statistically significant improvements were found between the baseline and improved approaches for specificity and accuracy (P = 0.0024 and 0.0053, respectively). It was noted that the improved approach showed an increase of 1.1% in the accuracy after applying the new probability-based heuristic function.


2021 ◽  
Vol 2021 ◽  
pp. 1-15
Author(s):  
Zihe Huang ◽  
Ying Fang ◽  
He Huang ◽  
Xiaomei Xu ◽  
Jiwei Wang ◽  
...  

Retinal blood vessels are the only deep microvessels in the blood circulation system that can be observed directly and noninvasively, providing us with a means of observing vascular pathologies. Cardiovascular and cerebrovascular diseases, such as glaucoma and diabetes, can cause structural changes in the retinal microvascular network. Therefore, the study of effective retinal vessel segmentation methods is of great significance for the early diagnosis of cardiovascular diseases and the vascular network’s quantitative results. This paper proposes an automatic retinal vessel segmentation method based on an improved U-Net network. Firstly, the image patches are rotated to amplify the image data, and then, the RGB fundus image is preprocessed by normalization. Secondly, after the improved U-Net model is constructed with 23 convolutional layers, 4 pooling layers, 4 upsampling layers, 2 dropout layers, and Squeeze and Excitation (SE) block, the extracted image patches are utilized for training the model. Finally, the fundus images are segmented through the trained model to achieve precise extraction of retinal blood vessels. According to experimental results, the accuracy of 0.9701, 0.9683, and 0.9698, sensitivity of 0.8011, 0.6329, and 0.7478, specificity of 0.9849, 0.9967, and 0.9895, F1-Score of 0.8099, 0.8049, and 0.8013, and area under the curve (AUC) of 0.8895, 0.8845, and 0.8686 were achieved on DRIVE, STARE, and HRF databases, respectively, which is better than most classical algorithms.


Entropy ◽  
2020 ◽  
Vol 22 (8) ◽  
pp. 811
Author(s):  
Dan Yang ◽  
Guoru Liu ◽  
Mengcheng Ren ◽  
Bin Xu ◽  
Jiao Wang

Computer-aided automatic segmentation of retinal blood vessels plays an important role in the diagnosis of diseases such as diabetes, glaucoma, and macular degeneration. In this paper, we propose a multi-scale feature fusion retinal vessel segmentation model based on U-Net, named MSFFU-Net. The model introduces the inception structure into the multi-scale feature extraction encoder part, and the max-pooling index is applied during the upsampling process in the feature fusion decoder of an improved network. The skip layer connection is used to transfer each set of feature maps generated on the encoder path to the corresponding feature maps on the decoder path. Moreover, a cost-sensitive loss function based on the Dice coefficient and cross-entropy is designed. Four transformations—rotating, mirroring, shifting and cropping—are used as data augmentation strategies, and the CLAHE algorithm is applied to image preprocessing. The proposed framework is tested and trained on DRIVE and STARE, and sensitivity (Sen), specificity (Spe), accuracy (Acc), and area under curve (AUC) are adopted as the evaluation metrics. Detailed comparisons with U-Net model, at last, it verifies the effectiveness and robustness of the proposed model. The Sen of 0.7762 and 0.7721, Spe of 0.9835 and 0.9885, Acc of 0.9694 and 0.9537 and AUC value of 0.9790 and 0.9680 were achieved on DRIVE and STARE databases, respectively. Results are also compared to other state-of-the-art methods, demonstrating that the performance of the proposed method is superior to that of other methods and showing its competitive results.


Author(s):  
Chandana R

Glaucoma, a disease of the optic nerve is caused by the increase in the intraocular pressure of the eye and results in damage to the optic nerve and vision loss. The main characteristic of glaucoma is an elevated intraocular pressure (IOP) and also the blood vessels get narrower. Vessel segmentation is one of the main steps in retinal automated analysis tools. Retinal vessel segmentation and delineation of morphological attributes of retinal blood vessels are utilized for diagnosis, screening, treatment, and evaluation of various cardiovascular and ophthalmologic diseases. Since, the numbers of blood vessels are more in the glaucomatous eye , glaucoma is detected by means of ISNT ratio. The image processing operations are performed on glaucomatous and normal eyes. We have chosen ten images of each from the database and ISNT ratio is calculated to get the area of blood vessels in each of the four quadrants of the eye and hence glaucoma is detected.


PLoS ONE ◽  
2021 ◽  
Vol 16 (9) ◽  
pp. e0257013
Author(s):  
Xiaolong Hu ◽  
Liejun Wang ◽  
Shuli Cheng ◽  
Yongming Li

The cardinal symptoms of some ophthalmic diseases observed through exceptional retinal blood vessels, such as retinal vein occlusion, diabetic retinopathy, etc. The advanced deep learning models used to obtain morphological and structural information of blood vessels automatically are conducive to the early treatment and initiative prevention of ophthalmic diseases. In our work, we propose a hierarchical dilation convolutional network (HDC-Net) to extract retinal vessels in a pixel-to-pixel manner. It utilizes the hierarchical dilation convolution (HDC) module to capture the fragile retinal blood vessels usually neglected by other methods. An improved residual dual efficient channel attention (RDECA) module can infer more delicate channel information to reinforce the discriminative capability of the model. The structured Dropblock can help our HDC-Net model to solve the network overfitting effectively. From a holistic perspective, the segmentation results obtained by HDC-Net are superior to other deep learning methods on three acknowledged datasets (DRIVE, CHASE-DB1, STARE), the sensitivity, specificity, accuracy, f1-score and AUC score are {0.8252, 0.9829, 0.9692, 0.8239, 0.9871}, {0.8227, 0.9853, 0.9745, 0.8113, 0.9884}, and {0.8369, 0.9866, 0.9751, 0.8385, 0.9913}, respectively. It surpasses most other advanced retinal vessel segmentation models. Qualitative and quantitative analysis demonstrates that HDC-Net can fulfill the task of retinal vessel segmentation efficiently and accurately.


2019 ◽  
Vol 2 (3) ◽  
pp. 43-67
Author(s):  
Sanyukta Chetia ◽  
SR Nirmala

Purpose: The study of retinal blood vessel morphology is of great importance in retinal image analysis. The retinal blood vessels have a number of distinct features such as width, diameter, tortuosity, etc. In this paper, a method is proposed to measure the tortuosity of retinal blood vessels obtained from retinal fundus images. Tortuosity is a situation in which blood vessels become tortuous, that is, curved or non-smooth. It is one of the earliest changes that occur in blood vessels in some retinal diseases. Hence, its detection at an early stage can prevent the progression of retinal diseases such as diabetic retinopathy, hypertensive retinopathy, retinopathy of prematurity, etc. The present study focuses on the measurement of retinal blood vessel tortuosity for the analysis of hypertensive retinopathy. Hypertensive retinopathy is a condition in which the retinal vessels undergo changes and become tortuous due to long term high blood pressure. Early recognition of hypertensive retinopathy signs remains an important step in determining the target-organ damage and risk assessment of hypertensive patients. Hence, this paper attempts to estimate tortuosity using image-processing techniques that have been tested on artery and vein segments of retinal images. Design: Image processing-based model designed to measure blood vessel tortuosity. Methods: In this paper, a novel image processing-based model is proposed for tortuosity measurement. This parameter will be helpful for analyzing hypertensive retinopathy. To test the eff ectiveness of the system in determining tortuosity, the method is first applied on a set of synthetically generated blood vessels. Then, the method is repeated on blood vessel (both artery and vein) segments extracted from retinal images collected from publicly available databases and on images collected from a local eye hospital. The blood vessel segment images that are used in the method are binary images where blood vessels are represented by white pixels (foreground), while black pixels represent the background. Vessels are then classified into normal, moderately tortuous, and severely tortuous by following the analysis performed on the images in the Retinal Vessel Tortuosity Data Set (RET-TORT) obtained from BioIm Lab, Laboratory of Biomedical Imaging (Padova, Italy). This database consists of 30 artery segments and 30 vein segments, which were manually ordered on the basis of increasing tortuosity by Dr. S. Piermarocchi, a retinal specialist belonging to the Department of Ophthalmology of the University of Padova (Italy). The artery and vein segments with the fewest number of turns are given a low tortuosity ranking, while those with the greatest number of turns are given a high tortuosity ranking by the expert. Based on this concept, our proposed method defines retinal image segments as normal when they present the fewest number of twists/turns, moderately tortuous when they present more twists/turns than normal but fewer than severely tortuous vessels, and severely tortuous when they present a greater number of twists/turns than moderately tortuous vessels. On implementing our image processing-based method on binary blood vessel segment images that are represented by white pixels, it is found that the vessel pixel (white pixels) count increases with increasing vessel tortuosity. That is, for normal blood vessels, the white pixel count is less compared to moderately tortuous and severely tortuous vessels. It should be noted that the images obtained from the different databases and from the local hospital for this experiment are not hypertensive retinopathy images. Instead, they are mostly normal eye images and very few of them show tortuous blood vessels. Results: The results of the synthetically generated vessel segment images from the baseline for the evaluation of retinal blood vessel tortuosity. The proposed method is then applied on the retinal vessel segments that are obtained from the DRIVE and HRF databases, respectively. Finally, to evaluate the capability of the proposed method in determining the tortuosity level of the blood vessels, the method is tested with a standard tortuous database, namely, the RET-TORT database. The results are then compared with the tortuosity level mentioned in the database. It was found that our method is able to classify blood vessel images as normal, moderately tortuous, and severely tortuous, with results closely matching the clinical ordering provided by the expert in the RET-TORT database. Subjective evaluation was also performed by research scholars and postgraduate students to cross-validate the results. Conclusion: The close correlation between the tortuosity evaluation using the proposed method and the clinical ordering of retinal vessels as provided by the retinal specialist in the RET-TORT database shows that, although simple, this method can evaluate the tortuosity of vessel segments effectively.  


2020 ◽  
Vol 10 (18) ◽  
pp. 6163 ◽  
Author(s):  
Joaquín Rodríguez ◽  
Gilberto Ochoa-Ruiz ◽  
Christian Mata

Medical support systems used to assist in the diagnosis of prostate lesions generally related to prostate segmentation is one of the majors focus of interest in recent literature. The main problem encountered in the diagnosis of a prostate study is the localization of a Regions of Interest (ROI) containing a tumor tissue. In this paper, a new GUI tool based on a semi-automatic prostate segmentation is presented. The main rationale behind this tool and the focus of this article is facilitate the time consuming segmentation process used for annotating images in the clinical practice, enabling the radiologists to use novel and easy to use semi-automatic segmentation techniques instead of manual segmentation. In this work, a detailed specification of the proposed segmentation algorithm using an Active Contour Models (ACM) aided with a Gradient Vector Flow (GVF) component is defined. The purpose is to help the manual segmentation process of the main ROIs of prostate gland zones. Finally, an experimental case of use and a discussion part of the results are presented.


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