scholarly journals Kestrel-based Search Algorithm (KSA) and Long Short Term Memory (LSTM) Network for feature selection in classification of high-dimensional bioinformatics datasets

Author(s):  
Israel Edem Agbehadji ◽  
Richard Millham ◽  
Simon James Fong ◽  
Hongji Yang
Author(s):  
Preethi D. ◽  
Neelu Khare

This chapter presents an ensemble-based feature selection with long short-term memory (LSTM) model. A deep recurrent learning model is proposed for classifying network intrusion. This model uses ensemble-based feature selection (EFS) for selecting the appropriate features from the dataset and long short-term memory for the classification of network intrusions. The EFS combines five feature selection techniques, namely information gain, gain ratio, chi-square, correlation-based feature selection, and symmetric uncertainty-based feature selection. The experiments were conducted using the standard benchmark NSL-KDD dataset and implemented using tensor flow and python. The proposed model is evaluated using the classification performance metrics and also compared with all the 41 features without any feature selection as well as with each individual feature selection technique and classified using LSTM. The performance study showed that the proposed model performs better, with 99.8% accuracy, with a higher detection and lower false alarm rates.


Author(s):  
Xu Li ◽  
Pingzhao Hu

Introduction & Objective: Ulcerative colitis is an intestinal disorder with an erratic progression in which the patients suffer from capricious remissions and changeful severities. Lacking prognosis to the UC progression can lead to irrational treatments that adversely affect the patients’ quality of life. Existing studies have stated a connection between gut microbiomes and UC progression. We aim to construct Long Short-Term Memory (LSTM) networks to predict UC progression (remission & severity) from longitudinal gut microbiome data. Methods: Using one-step and two-step modelling strategies, we develop a standard LSTM network, an encoder-decoder LSTM network, a convolutional LSTM network, and several benchmarking classifiers such as random forests. For high-dimensional data, we also implement auto-encoder to select variables in addition to baseline procedures like principal component analysis. We train each model using a longitudinal microbiome data, and validate them via a 10-round set splitting approach. Results: Each proposed model shows the potential to predict UC progression, but they do not reach an optimal level for medical utilizations. The encoder-decoder LSTM demonstrates superiority over the other classifiers while the auto-encoder outperformed the baseline variable selectors. Conclusion: We support the capacity of Long Short-Term Memory (LSTM) networks to predict UC progression from longitudinal microbiome data, and verify the strength of autoencoder networks in selecting features from high dimensional data.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tuan D. Pham

AbstractImage analysis in histopathology provides insights into the microscopic examination of tissue for disease diagnosis, prognosis, and biomarker discovery. Particularly for cancer research, precise classification of histopathological images is the ultimate objective of the image analysis. Here, the time-frequency time-space long short-term memory network (TF-TS LSTM) developed for classification of time series is applied for classifying histopathological images. The deep learning is empowered by the use of sequential time-frequency and time-space features extracted from the images. Furthermore, unlike conventional classification practice, a strategy for class modeling is designed to leverage the learning power of the TF-TS LSTM. Tests on several datasets of histopathological images of haematoxylin-and-eosin and immunohistochemistry stains demonstrate the strong capability of the artificial intelligence (AI)-based approach for producing very accurate classification results. The proposed approach has the potential to be an AI tool for robust classification of histopathological images.


Author(s):  
Zhang Chao ◽  
Wang Wei-zhi ◽  
Zhang Chen ◽  
Fan Bin ◽  
Wang Jian-guo ◽  
...  

Accurate and reliable fault diagnosis is one of the key and difficult issues in mechanical condition monitoring. In recent years, Convolutional Neural Network (CNN) has been widely used in mechanical condition monitoring, which is also a great breakthrough in the field of bearing fault diagnosis. However, CNN can only extract local features of signals. The model accuracy and generalization of the original vibration signals are very low in the process of vibration signal processing only by CNN. Based on the above problems, this paper improves the traditional convolution layer of CNN, and builds the learning module (local feature learning block, LFLB) of the local characteristics. At the same time, the Long Short-Term Memory (LSTM) is introduced into the network, which is used to extract the global features. This paper proposes the new neural network—improved CNN-LSTM network. The extracted deep feature is used for fault classification. The improved CNN-LSTM network is applied to the processing of the vibration signal of the faulty bearing collected by the bearing failure laboratory of Inner Mongolia University of science and technology. The results show that the accuracy of the improved CNN-LSTM network on the same batch test set is 98.75%, which is about 24% higher than that of the traditional CNN. The proposed network is applied to the bearing data collection of Western Reserve University under the condition that the network parameters remain unchanged. The experiment shows that the improved CNN-LSTM network has better generalization than the traditional CNN.


Energies ◽  
2021 ◽  
Vol 14 (18) ◽  
pp. 5762
Author(s):  
Syed Basit Ali Bukhari ◽  
Khawaja Khalid Mehmood ◽  
Abdul Wadood ◽  
Herie Park

This paper presents a new intelligent islanding detection scheme (IIDS) based on empirical wavelet transform (EWT) and long short-term memory (LSTM) network to identify islanding events in microgrids. The concept of EWT is extended to extract features from three-phase signals. First, the three-phase voltage signals sampled at the terminal of targeted distributed energy resource (DER) or point of common coupling (PCC) are decomposed into empirical modes/frequency subbands using EWT. Then, instantaneous amplitudes and instantaneous frequencies of the three-phases at different frequency subbands are combined, and various statistical features are calculated. Finally, the EWT-based features along with the three-phase voltage signals are input to the LSTM network to differentiate between non-islanding and islanding events. To assess the efficacy of the proposed IIDS, extensive simulations are performed on an IEC microgrid and an IEEE 34-node system. The simulation results verify the effectiveness of the proposed IIDS in terms of non-detection zone (NDZ), computational time, detection accuracy, and robustness against noisy measurement. Furthermore, comparisons with existing intelligent methods and different LSTM architectures demonstrate that the proposed IIDS offers higher reliability by significantly reducing the NDZ and stands robust against measurements uncertainty.


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