scholarly journals Degradation of naphthalene and pyrene by several biofilm-forming photosynthesis purple bacterial strains

2020 ◽  
Vol 18 (3) ◽  
pp. 561-570
Author(s):  
Nguyen Thi Minh Nguyet ◽  
Hoang Phuong Ha ◽  
Dong Van Quyen ◽  
Nguyen Ngoc Huong Tra ◽  
Le Thi Nhi Cong
Keyword(s):  
Aromatic Hydrocarbons ◽  
Purple Bacteria ◽  
Aquatic Organisms ◽  
Storage Tanks ◽  
Bacterial Strains ◽  
Anaerobic Conditions ◽  
Dominant Group ◽  
Photosynthetic Purple Bacteria ◽  
Oxygen Conditions ◽  
Petroleum Storage

Aromatic hydrocarbons such as naphthalene, pyrene are recalcitrant compounds found in oil contaminated areas including petroleum storage tanks, oil exploiting companies. These components are difficult to be degraded/transformed in the lack of oxygen conditions. Among anaerobic and micro-aerobic microorganisms, photosynthetic purple bacteria are the dominant group. Photosynthetic purple bacteria (PPB) are considered as aquatic organisms which are able to grow in anaerobic conditions by photosynthesis but without oxygen. This bacterial group has flexible metabolic types depending on living conditions, then they are widely distributed in nature. There are numerous publications on planktonic PPB which could use naphthalene and pyrene as carbon and energy sources. However, there is no publication on biofilm formed by PPB to degrade their aromatic compounds. In this research, 4 biofilm-forming PPB strains including DQ41, PY2, PY6 and DG12 were screened and estimated their pyrene and napthalene degradation capacity. These organisms demonstrated high biofilm forming ability. As biofilm types, their utilization efficiencies were upper 79% with the initial concentrations of naphthalene and pyrene of 200 and 250 ppm, respectively. These results may contribute to enlarge the number of biofilm-forming microorganisms to degrade/transform aromatic hydrocarbons in polluted area treatment in Vietnam. 

scholarly journals Identification and Functional Analysis of ThADH1 and ThADH4 Genes Involved in Tolerance to Waterlogging Stress in Taxodium hybrid ‘Zhongshanshan 406’

Genes ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 225
Author(s):  
Lei Xuan ◽  
Jianfeng Hua ◽  
Fan Zhang ◽  
Zhiquan Wang ◽  
Xiaoxiao Pei ◽  
...  
Keyword(s):  
Ethanol Metabolism ◽  
Flooding Tolerance ◽  
Transcriptome Data ◽  
Low Oxygen ◽  
Anaerobic Conditions ◽  
Waterlogging Tolerance ◽  
Waterlogging Stress ◽  
Adh Genes ◽  
Oxygen Conditions ◽  
Stems And Leaves

The Taxodium hybrid ‘Zhongshanshan 406’ (T. hybrid ‘Zhongshanshan 406’) [Taxodium mucronatum Tenore × Taxodium distichum (L.). Rich] has an outstanding advantage in flooding tolerance and thus has been widely used in wetland afforestation in China. Alcohol dehydrogenase genes (ADHs) played key roles in ethanol metabolism to maintain energy supply for plants in low-oxygen conditions. Two ADH genes were isolated and characterized—ThADH1 and ThADH4 (GenBank ID: AWL83216 and AWL83217—basing on the transcriptome data of T. hybrid ‘Zhongshanshan 406’ grown under waterlogging stress. Then the functions of these two genes were investigated through transient expression and overexpression. The results showed that the ThADH1 and ThADH4 proteins both fall under ADH III subfamily. ThADH1 was localized in the cytoplasm and nucleus, whereas ThADH4 was only localized in the cytoplasm. The expression of the two genes was stimulated by waterlogging and the expression level in roots was significantly higher than those in stems and leaves. The respective overexpression of ThADH1 and ThADH4 in Populus caused the opposite phenotype, while waterlogging tolerance of the two transgenic Populus significantly improved. Collectively, these results indicated that genes ThADH1 and ThADH4 were involved in the tolerance and adaptation to anaerobic conditions in T. hybrid ‘Zhongshanshan 406’.

B800–B850 coherence correlates with energy transfer rates in the LH2 complex of photosynthetic purple bacteria

2015 ◽  
Vol 17 (46) ◽  
pp. 30805-30816 ◽  
Author(s):  
Cathal Smyth ◽  
Daniel G. Oblinsky ◽  
Gregory D. Scholes
Keyword(s):  
Energy Transfer ◽  
Quantum Information ◽  
Information Science ◽  
Light Harvesting ◽  
Purple Bacteria ◽  
Quantum Information Science ◽  
Light Harvesting Complex ◽  
Transfer Rates ◽  
Photosynthetic Purple Bacteria

Delocalization of a model light-harvesting complex is investigated using multipartite measures inspired by quantum information science.

Understanding Biophotocurrent Generation in Photosynthetic Purple Bacteria

ACS Catalysis ◽  
2018 ◽  
Vol 9 (2) ◽  
pp. 867-873 ◽  
Author(s):  
Matteo Grattieri ◽  
Zayn Rhodes ◽  
David P. Hickey ◽  
Kevin Beaver ◽  
Shelley D. Minteer
Keyword(s):  
Purple Bacteria ◽  
Photosynthetic Purple Bacteria

scholarly journals Biodegradation of two organic UV-Filters by single bacteria strains

2021 ◽  
Author(s):  
Florentina Laura Chiriac ◽  
Catalina Stoica ◽  
Iuiana Paun ◽  
Florinela Pirvu ◽  
Toma Galaon ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
Emerging Contaminants ◽  
Degradation Products ◽  
Aquatic Organisms ◽  
Uv Filters ◽  
Bacterial Strains ◽  
Gram Negative ◽  
Biodegradation Process ◽  
Salmonella Thyphimurium ◽  
Organic Uv Filters

Abstract Organic UV-filters, including 4-hydroxybenzophenone (4-HBP) and 2,4-dihydroxybenzophenone (BP-1), are persistent emerging contaminants whose presence in the environment poses a threat to aquatic organisms due to their endocrine disruptor’s properties. For this reason, finding suitable technological processes for their safety and efficient removal from the environment represent a priority for the scientific community. To the author’s knowledge, until now, there are no studies reporting the biodegradation of 4-HBP and BP-1 by a single bacteria strain. In this paper, there were tested the 4-HBP and BP-1 biodegradation potential of two Gram-positive (Staphylococcus aureus and Enterococcus faecalis) and two Gram-negative (Salmonella typhimurium and Serratia rubidae). The 4-HPB biodegradation process was observed only in the presence of Gram-negative bacterial strains. Thus, the biodegradation rates of 4-HBP reached up to 12.7% after 24h of incubation in presence of Salmonella thyphimurium and up to 24.0% after 24h of incubation with Serratia rubidae. Staphylococcus aureus was able to biodegrade 26.7% of BP-1, while Salmonella thiphymurium was able to biodegrade 14.7% of BP-1 after 24h of incubation. Their biodegradation products generated during the 4-HBP biodegradation process by Serratia rubidae were analyzed through LC-MS/MS analysis. The (bio)degradation products were benzophenone and a multi-hydroxylated derivative of 4-HBP and the degradation pathways were proposed. The data obtained in this study gave important information regarding the 4-HBP and BP-1 potential biodegradation by single bacterial strains.

scholarly journals Contribution of low-temperature single-molecule techniques to structural issues of pigment–protein complexes from photosynthetic purple bacteria

2018 ◽  
Vol 15 (138) ◽  
pp. 20170680 ◽  
Author(s):  
Alexander Löhner ◽  
Richard Cogdell ◽  
Jürgen Köhler
Keyword(s):  
Low Temperature ◽  
Single Molecule ◽  
Degrees Of Freedom ◽  
Protein Complexes ◽  
Purple Bacteria ◽  
Structural Models ◽  
Spectral Features ◽  
Light Harvesting Complexes ◽  
Pigment Protein Complexes ◽  
Photosynthetic Purple Bacteria

As the electronic energies of the chromophores in a pigment–protein complex are imposed by the geometrical structure of the protein, this allows the spectral information obtained to be compared with predictions derived from structural models. Thereby, the single-molecule approach is particularly suited for the elucidation of specific, distinctive spectral features that are key for a particular model structure, and that would not be observable in ensemble-averaged spectra due to the heterogeneity of the biological objects. In this concise review, we illustrate with the example of the light-harvesting complexes from photosynthetic purple bacteria how results from low-temperature single-molecule spectroscopy can be used to discriminate between different structural models. Thereby the low-temperature approach provides two advantages: (i) owing to the negligible photobleaching, very long observation times become possible, and more importantly, (ii) at cryogenic temperatures, vibrational degrees of freedom are frozen out, leading to sharper spectral features and in turn to better resolved spectra.

scholarly journals Carbon and Hydrogen Stable Isotope Fractionation during Aerobic Bacterial Degradation of Aromatic Hydrocarbons

2002 ◽  
Vol 68 (10) ◽  
pp. 5191-5194 ◽  
Author(s):  
Barbara Morasch ◽  
Hans H. Richnow ◽  
Bernhard Schink ◽  
Andrea Vieth ◽  
Rainer U. Meckenstock
Keyword(s):  
Stable Isotope ◽  
Pseudomonas Putida ◽  
Aromatic Hydrocarbons ◽  
Isotope Fractionation ◽  
Bacterial Degradation ◽  
Aerobic Degradation ◽  
Bacterial Strains ◽  
Stable Isotope Fractionation ◽  
Substrate Degradation ◽  
Different Types

ABSTRACT 13C/12C and D/H stable isotope fractionation during aerobic degradation was determined for Pseudomonas putida strain mt-2, Pseudomonas putida strain F1, Ralstonia pickettii strain PKO1, and Pseudomonas putida strain NCIB 9816 grown with toluene, xylenes, and naphthalene. Different types of initial reactions used by the respective bacterial strains could be linked with certain extents of stable isotope fractionation during substrate degradation.

The phototoxicity of non-carcinogenic polycyclic aromatic hydrocarbons in aquatic organisms

Chemosphere ◽  
1985 ◽  
Vol 14 (11-12) ◽  
pp. 1829-1834 ◽  
Author(s):  
Jacques Kagan ◽  
Edgard D. Kagan ◽  
Isabelle A. Kagan ◽  
Peggy A. Kagan ◽  
Susan Quigley
Keyword(s):  
Polycyclic Aromatic Hydrocarbons ◽  
Aromatic Hydrocarbons ◽  
Aquatic Organisms ◽  
Polycyclic Aromatic
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