scholarly journals Learning Triple Embeddings from Knowledge Graphs

2020 ◽  
Vol 34 (04) ◽  
pp. 3874-3881 ◽  
Author(s):  
Valeria Fionda ◽  
Giuseppe Pirrò
Keyword(s):  
Line Graph ◽  
Graph Embedding ◽  
Knowledge Graph ◽  
World Knowledge ◽  
Feature Vectors ◽  
Edge Weighting ◽  
Knowledge Graphs ◽  
Node Classification ◽  
A New Technique ◽  
Semantic Proximity

Graph embedding techniques allow to learn high-quality feature vectors from graph structures and are useful in a variety of tasks, from node classification to clustering. Existing approaches have only focused on learning feature vectors for the nodes and predicates in a knowledge graph. To the best of our knowledge, none of them has tackled the problem of directly learning triple embeddings. The approaches that are closer to this task have focused on homogeneous graphs involving only one type of edge and obtain edge embeddings by applying some operation (e.g., average) on the embeddings of the endpoint nodes. The goal of this paper is to introduce Triple2Vec, a new technique to directly embed knowledge graph triples. We leverage the idea of line graph of a graph and extend it to the context of knowledge graphs. We introduce an edge weighting mechanism for the line graph based on semantic proximity. Embeddings are finally generated by adopting the SkipGram model, where sentences are replaced with graph walks. We evaluate our approach on different real-world knowledge graphs and compared it with related work. We also show an application of triple embeddings in the context of user-item recommendations.

scholarly journals Entity Alignment between Knowledge Graphs Using Attribute Embeddings

2019 ◽  
Vol 33 ◽  
pp. 297-304 ◽  
Author(s):  
Bayu Distiawan Trisedya ◽  
Jianzhong Qi ◽  
Rui Zhang
Keyword(s):  
Real World ◽  
Graph Embedding ◽  
Knowledge Bases ◽  
Knowledge Graph ◽  
World Knowledge ◽  
Large Numbers ◽  
Proposed Model ◽  
Alignment Task ◽  
Transitivity Rule ◽  
Knowledge Graphs

The task of entity alignment between knowledge graphs aims to find entities in two knowledge graphs that represent the same real-world entity. Recently, embedding-based models are proposed for this task. Such models are built on top of a knowledge graph embedding model that learns entity embeddings to capture the semantic similarity between entities in the same knowledge graph. We propose to learn embeddings that can capture the similarity between entities in different knowledge graphs. Our proposed model helps align entities from different knowledge graphs, and hence enables the integration of multiple knowledge graphs. Our model exploits large numbers of attribute triples existing in the knowledge graphs and generates attribute character embeddings. The attribute character embedding shifts the entity embeddings from two knowledge graphs into the same space by computing the similarity between entities based on their attributes. We use a transitivity rule to further enrich the number of attributes of an entity to enhance the attribute character embedding. Experiments using real-world knowledge bases show that our proposed model achieves consistent improvements over the baseline models by over 50% in terms of hits@1 on the entity alignment task.

scholarly journals Logic Attention Based Neighborhood Aggregation for Inductive Knowledge Graph Embedding

2019 ◽  
Vol 33 ◽  
pp. 7152-7159 ◽  
Author(s):  
Peifeng Wang ◽  
Jialong Han ◽  
Chenliang Li ◽  
Rong Pan
Keyword(s):  
Real World ◽  
Graph Embedding ◽  
Daily Basis ◽  
Knowledge Graph ◽  
World Knowledge ◽  
Attention Network ◽  
Knowledge Graphs ◽  
Low Dimensional

Knowledge graph embedding aims at modeling entities and relations with low-dimensional vectors. Most previous methods require that all entities should be seen during training, which is unpractical for real-world knowledge graphs with new entities emerging on a daily basis. Recent efforts on this issue suggest training a neighborhood aggregator in conjunction with the conventional entity and relation embeddings, which may help embed new entities inductively via their existing neighbors. However, their neighborhood aggregators neglect the unordered and unequal natures of an entity’s neighbors. To this end, we summarize the desired properties that may lead to effective neighborhood aggregators. We also introduce a novel aggregator, namely, Logic Attention Network (LAN), which addresses the properties by aggregating neighbors with both rules- and network-based attention weights. By comparing with conventional aggregators on two knowledge graph completion tasks, we experimentally validate LAN’s superiority in terms of the desired properties.

scholarly journals TransET: Knowledge Graph Embedding with Entity Types

Electronics ◽  
2021 ◽  
Vol 10 (12) ◽  
pp. 1407
Author(s):  
Peng Wang ◽  
Jing Zhou ◽  
Yuzhang Liu ◽  
Xingchen Zhou
Keyword(s):  
Link Prediction ◽  
State Of The Art ◽  
Score Function ◽  
Graph Embedding ◽  
Vector Spaces ◽  
Knowledge Graph ◽  
Semantic Features ◽  
Knowledge Graphs ◽  
Real World Datasets ◽  
Low Dimensional

Knowledge graph embedding aims to embed entities and relations into low-dimensional vector spaces. Most existing methods only focus on triple facts in knowledge graphs. In addition, models based on translation or distance measurement cannot fully represent complex relations. As well-constructed prior knowledge, entity types can be employed to learn the representations of entities and relations. In this paper, we propose a novel knowledge graph embedding model named TransET, which takes advantage of entity types to learn more semantic features. More specifically, circle convolution based on the embeddings of entity and entity types is utilized to map head entity and tail entity to type-specific representations, then translation-based score function is used to learn the presentation triples. We evaluated our model on real-world datasets with two benchmark tasks of link prediction and triple classification. Experimental results demonstrate that it outperforms state-of-the-art models in most cases.

scholarly journals Finding Similar Entities Across Knowledge Graphs

2021 ◽  
Author(s):  
Sareh Aghaei ◽  
Anna Fensel
Keyword(s):  
Knowledge Integration ◽  
Main Idea ◽  
Research Problem ◽  
Knowledge Graph ◽  
World Knowledge ◽  
Multilayer Perception ◽  
Pertinent Information ◽  
Generate Vector ◽  
Knowledge Graphs ◽  
Vector Representations

Finding similar entities among knowledge graphs is an essential research problem for knowledge integration and knowledge graph connection. This paper aims at finding semantically similar entities between two knowledge graphs. This can help end users and search agents more effectively and easily access pertinent information across knowledge graphs. Given a query entity in one knowledge graph, the proposed approach tries to find the most similar entity in another knowledge graph. The main idea is to leverage graph embedding, clustering, regression and sentence embedding. In this approach, RDF2Vec has been employed to generate vector representations of all entities of the second knowledge graph and then the vectors have been clustered based on cosine similarity using K medoids algorithm. Then, an artificial neural network with multilayer perception topology has been used as a regression model to predict the corresponding vector in the second knowledge graph for a given vector from the first knowledge graph. After determining the cluster of the predicated vector, the entities of the detected cluster are ranked through sentence-BERT method and finally the entity with the highest rank is chosen as the most similar one. To evaluate the proposed approach, experiments have been conducted on real-world knowledge graphs. The experimental results demonstrate the effectiveness of the proposed approach.

scholarly journals Learning Hierarchy-Aware Knowledge Graph Embeddings for Link Prediction

2020 ◽  
Vol 34 (03) ◽  
pp. 3065-3072 ◽  
Author(s):  
Zhanqiu Zhang ◽  
Jianyu Cai ◽  
Yongdong Zhang ◽  
Jie Wang
Keyword(s):  
Coordinate System ◽  
Link Prediction ◽  
Graph Embedding ◽  
Knowledge Graph ◽  
Polar Coordinate System ◽  
Radial Coordinate ◽  
Polar Coordinate ◽  
Benchmark Datasets ◽  
Knowledge Graphs ◽  
Semantic Hierarchies

Knowledge graph embedding, which aims to represent entities and relations as low dimensional vectors (or matrices, tensors, etc.), has been shown to be a powerful technique for predicting missing links in knowledge graphs. Existing knowledge graph embedding models mainly focus on modeling relation patterns such as symmetry/antisymmetry, inversion, and composition. However, many existing approaches fail to model semantic hierarchies, which are common in real-world applications. To address this challenge, we propose a novel knowledge graph embedding model—namely, Hierarchy-Aware Knowledge Graph Embedding (HAKE)—which maps entities into the polar coordinate system. HAKE is inspired by the fact that concentric circles in the polar coordinate system can naturally reflect the hierarchy. Specifically, the radial coordinate aims to model entities at different levels of the hierarchy, and entities with smaller radii are expected to be at higher levels; the angular coordinate aims to distinguish entities at the same level of the hierarchy, and these entities are expected to have roughly the same radii but different angles. Experiments demonstrate that HAKE can effectively model the semantic hierarchies in knowledge graphs, and significantly outperforms existing state-of-the-art methods on benchmark datasets for the link prediction task.

scholarly journals Biological applications of knowledge graph embedding models

2020 ◽  
Author(s):  
Sameh K Mohamed ◽  
Aayah Nounu ◽  
Vít Nováček
Keyword(s):  
Predictive Accuracy ◽  
Biological Systems ◽  
Graph Embedding ◽  
Low Rank ◽  
Superior Performance ◽  
Knowledge Graph ◽  
Biological Knowledge ◽  
Knowledge Graphs ◽  
Vector Representations ◽  
Biological Entities

Abstract Complex biological systems are traditionally modelled as graphs of interconnected biological entities. These graphs, i.e. biological knowledge graphs, are then processed using graph exploratory approaches to perform different types of analytical and predictive tasks. Despite the high predictive accuracy of these approaches, they have limited scalability due to their dependency on time-consuming path exploratory procedures. In recent years, owing to the rapid advances of computational technologies, new approaches for modelling graphs and mining them with high accuracy and scalability have emerged. These approaches, i.e. knowledge graph embedding (KGE) models, operate by learning low-rank vector representations of graph nodes and edges that preserve the graph’s inherent structure. These approaches were used to analyse knowledge graphs from different domains where they showed superior performance and accuracy compared to previous graph exploratory approaches. In this work, we study this class of models in the context of biological knowledge graphs and their different applications. We then show how KGE models can be a natural fit for representing complex biological knowledge modelled as graphs. We also discuss their predictive and analytical capabilities in different biology applications. In this regard, we present two example case studies that demonstrate the capabilities of KGE models: prediction of drug–target interactions and polypharmacy side effects. Finally, we analyse different practical considerations for KGEs, and we discuss possible opportunities and challenges related to adopting them for modelling biological systems.

scholarly journals Caps-OWKG: a capsule network model for open-world knowledge graph

2021 ◽  
Author(s):  
Yuhan Wang ◽  
Weidong Xiao ◽  
Zhen Tan ◽  
Xiang Zhao
Keyword(s):  
Representation Learning ◽  
Graph Representation ◽  
Knowledge Graph ◽  
World Knowledge ◽  
Relational Structures ◽  
Open World ◽  
Latent Features ◽  
Knowledge Graphs ◽  
Low Dimensional ◽  
Better Than

AbstractKnowledge graphs are typical multi-relational structures, which is consisted of many entities and relations. Nonetheless, existing knowledge graphs are still sparse and far from being complete. To refine the knowledge graphs, representation learning is utilized to embed entities and relations into low-dimensional spaces. Many existing knowledge graphs embedding models focus on learning latent features in close-world assumption but omit the changeable of each knowledge graph.In this paper, we propose a knowledge graph representation learning model, called Caps-OWKG, which leverages the capsule network to capture the both known and unknown triplets features in open-world knowledge graph. It combines the descriptive text and knowledge graph to get descriptive embedding and structural embedding, simultaneously. Then, the both above embeddings are used to calculate the probability of triplet authenticity. We verify the performance of Caps-OWKG on link prediction task with two common datasets FB15k-237-OWE and DBPedia50k. The experimental results are better than other baselines, and achieve the state-of-the-art performance.

scholarly journals Understanding Negative Sampling in Knowledge Graph Embedding

2021 ◽  
Vol 12 (1) ◽  
pp. 71-81
Author(s):  
Jing Qian ◽  
Gangmin Li ◽  
Katie Atkinson ◽  
Yong Yue
Keyword(s):  
Link Prediction ◽  
Graph Embedding ◽  
Knowledge Graph ◽  
Direct Impact ◽  
Dimensional Vector Space ◽  
Dynamic Distribution ◽  
Space Efficiency ◽  
Node Classification ◽  
Low Dimensional

Knowledge graph embedding (KGE) is to project entities and relations of a knowledge graph (KG) into a low-dimensional vector space, which has made steady progress in recent years. Conventional KGE methods, especially translational distance-based models, are trained through discriminating positive samples from negative ones. Most KGs store only positive samples for space efficiency. Negative sampling thus plays a crucial role in encoding triples of a KG. The quality of generated negative samples has a direct impact on the performance of learnt knowledge representation in a myriad of downstream tasks, such as recommendation, link prediction and node classification. We summarize current negative sampling approaches in KGE into three categories, static distribution-based, dynamic distribution-based and custom cluster-based respectively. Based on this categorization we discuss the most prevalent existing approaches and their characteristics. It is a hope that this review can provide some guidelines for new thoughts about negative sampling in KGE.

End-to-end Relation-Enhanced Learnable Graph Self-attention Network for Knowledge Graphs Embedding

2021 ◽  
Author(s):  
Shengchen Jiang ◽  
Hongbin Wang ◽  
Xiang Hou
Keyword(s):  
Large Scale ◽  
Structural Characteristics ◽  
Graph Embedding ◽  
Knowledge Graph ◽  
Data Sets ◽  
Relevance Ranking ◽  
Convolutional Network ◽  
Attention Network ◽  
Knowledge Graphs ◽  
End To End

Abstract The existing methods ignore the adverse effect of knowledge graph incompleteness on knowledge graph embedding. In addition, the complexity and large-scale of knowledge information hinder knowledge graph embedding performance of the classic graph convolutional network. In this paper, we analyzed the structural characteristics of knowledge graph and the imbalance of knowledge information. Complex knowledge information requires that the model should have better learnability, rather than linearly weighted qualitative constraints, so the method of end-to-end relation-enhanced learnable graph self-attention network for knowledge graphs embedding is proposed. Firstly, we construct the relation-enhanced adjacency matrix to consider the incompleteness of the knowledge graph. Secondly, the graph self-attention network is employed to obtain the global encoding and relevance ranking of entity node information. Thirdly, we propose the concept of convolutional knowledge subgraph, it is constructed according to the entity relevance ranking. Finally, we improve the training effect of the convKB model by changing the construction of negative samples to obtain a better reliability score in the decoder. The experimental results based on the data sets FB15k-237 and WN18RR show that the proposed method facilitates more comprehensive representation of knowledge information than the existing methods, in terms of Hits@10 and MRR.

scholarly journals Bootstrapping Entity Alignment with Knowledge Graph Embedding

2018 ◽  
Author(s):  
Zequn Sun ◽  
Wei Hu ◽  
Qingheng Zhang ◽  
Yuzhong Qu
Keyword(s):  
Performance Improvement ◽  
Real World ◽  
State Of The Art ◽  
Graph Embedding ◽  
Training Data ◽  
Knowledge Graph ◽  
Error Accumulation ◽  
Knowledge Graphs ◽  
Real World Datasets ◽  
Low Dimensional

Embedding-based entity alignment represents different knowledge graphs (KGs) as low-dimensional embeddings and finds entity alignment by measuring the similarities between entity embeddings. Existing approaches have achieved promising results, however, they are still challenged by the lack of enough prior alignment as labeled training data. In this paper, we propose a bootstrapping approach to embedding-based entity alignment. It iteratively labels likely entity alignment as training data for learning alignment-oriented KG embeddings. Furthermore, it employs an alignment editing method to reduce error accumulation during iterations. Our experiments on real-world datasets showed that the proposed approach significantly outperformed the state-of-the-art embedding-based ones for entity alignment. The proposed alignment-oriented KG embedding, bootstrapping process and alignment editing method all contributed to the performance improvement.

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