scholarly journals Kinetic intermediates of unfolding of dimeric prostatic phosphatase.

2007 ◽  
Vol 54 (2) ◽  
pp. 371-377
Author(s):  
Radosława Kuciel ◽  
Aleksandra Mazurkiewicz ◽  
Paulina Dudzik
Keyword(s):  
Rate Constants ◽  
Congo Red ◽  
Reaction Rate ◽  
Enzyme Inactivation ◽  
Thiol Groups ◽  
Ans Binding ◽  
First Order ◽  
Activity Measurements ◽  
Catalytically Active ◽  
Pseudo First Order

Kinetics of guanidine hydrochloride (GdnHCl)-induced unfolding of human prostatic acid phosphatase (hPAP), a homodimer of 50 kDa subunit molecular mass was investigated with enzyme activity measurements, capacity for binding an external hydrophobic probe, 1-anilinonaphtalene-8-sulfonate (ANS), accessibility of thiols to reaction with 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) and 2-(4'-maleimidylanilino)naphthalene-6-sulfonate (MIANS) and ability to bind Congo red dye. Kinetic analysis was performed to describe a possible mechanism of hPAP unfolding and dissociation that leads to generation of an inactive monomeric intermediate that resembles, in solution of 1.25 M GdnHCl pH 7.5, at 20 degrees C, in equilibrium, a molten globule state. The reaction of hPAP inactivation in 1.25 M GdnHCl followed first order kinetics with the reaction rate constant 0.0715 +/- 0.0024 min(-1) . The rate constants of similar range were found for the pseudo-first-order reactions of ANS and Congo red binding: 0.0366 +/- 0.0018 min(-1) and 0.0409 +/- 0.0052 min(-1), respectively. Free thiol groups, inaccessible in the native protein, were gradually becoming, with the progress of unfolding, exposed for the reactions with DTNB and MIANS, with the pseudo-first-order reaction rate constants 0.327 +/- 0.014 min(-1) and 0.216 +/- 0.010 min(-1), respectively. The data indicated that in the course of hPAP denaturation exposure of thiol groups to reagents took place faster than the enzyme inactivation and exposure of the protein hydrophobic surface. This suggested the existence of a catalytically active, partially unfolded, but probably dimeric kinetic intermediate in the process of hPAP unfolding. On the other hand, the protein inactivation was accompanied by exposure of a hydrophobic, ANS-binding surface, and with an increased capacity to bind Congo red. Together with previous studies these results suggest that the stability of the catalytically active conformation of the enzyme depends mainly on the dimeric structure of the native hPAP.

Kinetics of the Ozonation of Tetrabromobisphenol-A in Wastewater

2011 ◽  
Vol 383-390 ◽  
pp. 2945-2950 ◽  
Author(s):  
Jie Zhang ◽  
Shi Long He ◽  
Mei Feng Hou ◽  
Li Ping Wang ◽  
Li Jiang Tian
Keyword(s):  
Rate Constants ◽  
Apparent Rate Constant ◽  
Reaction Rate ◽  
Batch Reactor ◽  
Kinetic Studies ◽  
Tetrabromobisphenol A ◽  
First Order ◽  
Reaction Rate Constants ◽  
Pseudo First Order ◽  
Kinetics Of

The kinetics of TBBPA degradation by ozonation in semi-batch reactor was studied. The reaction rate constants of TBBPA with O3 and •OH were measured by means of direct ozone attack and competition kinetics, and the values of which were 6.10 l/(mol•s), 4.8×109 l/(mol•s), respectively. Results of kinetic studies showed that TBBPA degradation by ozonation under the different conditions tested followed the pseudo-first-order. The values of apparent rate constant of TBBPA degradation increased with the increase of ozone dosage and pH, but decreased with the increase of initial TBBPA concentration.

scholarly journals Reaction Kinetics of Carbon Dioxide in Aqueous Diethanolamine Solutions Using the Stopped-Flow Technique

2012 ◽  
Vol 19 (1) ◽  
pp. 55-66 ◽  
Author(s):  
Marta Siemieniec ◽  
Hanna Kierzkowska-Pawlak ◽  
Andrzej Chacuk
Keyword(s):  
Carbon Dioxide ◽  
Reaction Kinetics ◽  
Rate Constants ◽  
Reaction Rate ◽  
Reaction Rate Constant ◽  
Stopped Flow ◽  
First Order ◽  
Pseudo First Order ◽  
Kinetics Of ◽  
Good Agreement

Reaction Kinetics of Carbon Dioxide in Aqueous Diethanolamine Solutions Using the Stopped-Flow Technique The pseudo-first-order rate constants (kOV) for the reactions between CO2 and diethanolamine have been studied using the stopped-flow technique in an aqueous solution at 293, 298, 303 and 313 K. The amine concentrations ranged from 167 to 500 mol·m-3. The overall reaction rate constant was found to increase with amine concentration and temperature. Both the zwitterion and termolecular mechanisms were applied to correlate the experimentally obtained rate constants. The values of SSE quality index showed a good agreement between the experimental data and the corresponding fit by the use of both mechanisms.

scholarly journals Kinetic analysis of the heparin-enhanced plasmin–antithrombin III reaction. Apparent catalytic role of heparin

1981 ◽  
Vol 199 (3) ◽  
pp. 521-526 ◽  
Author(s):  
Raymund Machovich ◽  
Pál I. Bauer ◽  
Péter Arányi ◽  
Éva Kecskés ◽  
Kálmán G. Büki ◽  
...  
Keyword(s):  
Rate Constants ◽  
Antithrombin Iii ◽  
Enzyme Inactivation ◽  
Inactivation Rate ◽  
Enhancement Effect ◽  
Activation Entropy ◽  
Constant Amount ◽  
Rate Enhancement ◽  
First Order ◽  
Pseudo First Order

Inactivation of plasmin by a 3–4-fold molar excess of antithrombin III follows pseudo-first-order kinetics and the apparent rate constants are proportional to the concentration of the inhibitor. Heparin accelerates the inactivation reaction without changing its pseudo-first-order character, and the apparent rate constants are also proportional to the concentration of the polysaccharide. Heparin results in a minimum 20-fold rate enhancement of the reaction between plasmin and antithrombin III when the concentrations of heparin and plasmin are approx. 0.5mum and 1mum respectively. Heparin at a molar concentration well below that of plasmin still accelerates the reaction: one molecule of the polysaccharide is able to facilitate the inactivation of about 100 molecules of plasmin. Heparin must bind to plasmin to accelerate the plasmin–antithrombin III reaction, since the modification of four to five lysine residues of the enzyme inhibits the rate-enhancement effect of heparin and the dissociation of heparin–plasmin complex decreases the inactivation rate of plasmin. Increasing the concentration of antithrombin III, at a constant amount of heparin, results in increase of the inactivation rate. By contrast, the effect of increasing the amount of plasmin in the presence of constant amount of heparin and antithrombin III is such that higher plasmin-to-heparin ratios are associated with lower rates of inactivation. It seems, therefore, that to obtain ‘optimal’ conditions for fast enzyme inactivation, the amount of heparin should be matched to plasmin rather than to antithrombin III. Arrhenius plots of the plasmin–antithrombin III reaction are linear both in the absence and presence of heparin, at concentrations of 1 or 2mug/ml, over a range of 26K. Under these experimental conditions, heparin increases activation entropy. The findings show that heparin seems to fulfil some criteria that are characteristic for biological catalysis: binding, reaction-rate enhancement (increasing activation entropy), recycling of heparin (effectiveness of non-stoichiometric amounts of the polysaccharide) and specificity.

A kinetic standard for precise calibration of spectrophotometer cell temperature.

1981 ◽  
Vol 27 (5) ◽  
pp. 753-755 ◽  
Author(s):  
P A Adams ◽  
M C Berman
Keyword(s):  
Temperature Dependence ◽  
Rate Constants ◽  
Cell Temperature ◽  
First Order ◽  
Order Rate ◽  
Acid Catalyzed ◽  
Pseudo First Order ◽  
Hydrolysis Of

Abstract We describe a simple, highly reproducible kinetic technique for precisely measuring temperature in spectrophotometric systems having reaction cells that are inaccessible to conventional temperature probes. The method is based on the temperature dependence of pseudo-first-order rate constants for the acid-catalyzed hydrolysis of N-o-tolyl-D-glucosylamine. Temperatures of reaction cuvette contents are measured with a precision of +/- 0.05 degrees C (1 SD).

Theory of alternating current polarography. III. Frequency of alternating field and reaction rate

1955 ◽  
Vol 8 (3) ◽  
pp. 322 ◽  
Author(s):  
B Breyer ◽  
HH Bauer ◽  
S Hacobian
Keyword(s):  
Rate Constants ◽  
Reaction Rate ◽  
Electrode Reaction ◽  
Alternating Current ◽  
First Order ◽  
Electrode Reactions ◽  
Polarographic Current

The equation of the A.C. polarographic current for processes where the frequency of the alternating field is comparable with the rate of the electrode reaction is derived. Relative values of equilibrium rate constants of some first order electrode reactions are evaluated experimentally.

Kinetik der Reaktion von 2.4-Dinitrofluorbenzol mit Imidazol-, SH- und Imidazol-SH-Verbindungen / Kinetics of the Reaction of 2,4-dinitro-1-fluorobenzene with Imidazole-, SH- and Imidazole-SH-compounds

1971 ◽  
Vol 26 (10) ◽  
pp. 1010-1016 ◽  
Author(s):  
Renate Voigt ◽  
Helmut Wenck ◽  
Friedhelm Schneider
Keyword(s):  
Temperature Dependence ◽  
Rate Constants ◽  
Reaction Rate ◽  
Ph Dependence ◽  
First Order ◽  
Molecular Transfer ◽  
Thiolate Anion ◽  
Nucleophilic Reactivity ◽  
Kinetics Of ◽  
Lindley Equation

First order rate constants of the reaction of a series of SH-, imidazole- and imidazole/SH-compounds with FDNB as well as their pH- and temperature dependence were determined. Some of the tested imidazole/SH-compounds exhibit a higher nucleophilic reactivity as is expected on the basis of their pKSH-values. This enhanced reactivity is caused by an activation of the SH-groups by a neighbouring imidazole residue. The pH-independent rate constants were calculated using the Lindley equation.The kinetics of DNP-transfer from DNP-imidazole to SH-compounds were investigated. The pH-dependence of the reaction displays a maximum curve. Donor in this reaction is the DNP-imidazolecation and acceptor the thiolate anion.The reaction rate of FDNB with imidazole derivatives is two to three orders of magnitude slower than with SH-compounds.No inter- or intra-molecular transfer of the DNP-residue from sulfure to imidazole takes place.

On the Chemical Reactivity of the Phytochrome Chromophore in the Pr and Pfr Form

1985 ◽  
Vol 40 (3-4) ◽  
pp. 215-218 ◽  
Author(s):  
Fritz Thümmler ◽  
Peter Eilfeld ◽  
Wolfhart Rüdiger ◽  
Doo-Khil Moon ◽  
Pill-Soon Song
Keyword(s):  
Reaction Kinetics ◽  
Rate Constants ◽  
Chemical Reactivity ◽  
Order Reaction ◽  
First Order Reaction ◽  
Limiting Factor ◽  
Pseudo First Order Reaction ◽  
First Order ◽  
Pseudo First Order ◽  
The Difference

The reactivity of the phytochrome chromophore and related tetrapyrroles towards ozone and tetranitromethane was investigated. Both oxidizing reagents cause bleaching of the main absorp­tion band of the pigment. The rate constants for this bleaching were determined under conditions of pseudo first order reaction kinetics. The rate constants for the reaction with ozone are similar for native phytochrome and for freely accessible tetrapyrroles (biliverdin, small chromopeptides from phytochrome) indicating that accessibility is not the limiting factor for the reaction with ozone. Under a variety of conditions, the Pfr chromophore reacts by about 10% faster than the Pr chromophore. This may reflect the true difference in reactivity. The rate constants for the reaction with tetranitromethane are much larger for biliverdin, bilirubin and small chromopeptides from phytochrome than for native phytochrome. The limiting factor for this reaction in native phytochrome therefore is the accessibility of the chromophore by the reagent. Previous conclusions on the difference in exposure of the tetrapyrrole chromophore in Pr and Pfr are confirmed.

The mercury(II)-induced aquation of trans-Chloroamminebis(dimethylglyoximato)cobalt(III) complex

1975 ◽  
Vol 28 (5) ◽  
pp. 1133 ◽  
Author(s):  
S Chan ◽  
S Tan
Keyword(s):  
Rate Constants ◽  
Aqueous Ethanol ◽  
Association Constants ◽  
First Order ◽  
Order Rate ◽  
Leaving Group ◽  
Pseudo First Order ◽  
Activated Complex

The pseudo first-order rate constants for the mercury(II)-induced aquation of trans-[Co(Hdmg)2(NH3)Cl] (Hdmg = dimethylglyoximate ion) have been measured in aqueous and aqueous ethanol solutions (ethanol- water mole ratio 1 : 5.1) containing various excess amounts of mercury(II)ion at 273.2 K. Association constants of the complex formed with mercury(II) ion and rate constants for dissociation of the activated complex in both solutions have been calculated. The kinetic results are discussed in terms of formation of an activated complex Co-C1-Hg, followed by a simple rate-determining aquation in which HgCl+ acts as the leaving group.

Sign in / Sign up

Export Citation Format

Share Document