scholarly journals PubMed Central: An Essential Resource for Information Professionals and Researchers

2013 ◽  
Vol 8 (2) ◽  
pp. 261
Author(s):  
Joanne L. Jordan

Objective – A review of the journals containing research listed in PubMed Central (PMC), but not selected for inclusion in the National Library of Medicine (NLM) collection. The authors identified reasons why journals had not been included in the collection and if any met the NLM selection criteria and were appropriate for inclusion. Design – Descriptive study. Setting – National Library of Medicine, United States. Subjects – 571 journals that were not included in the NLM collection but had research articles in PMC. Methods – In October 2009, a report was produced from the NLM library system listing journals tagged as having articles in PMC and not being in the NLM collection. Information was gathered on the journals identified and these were checked against the Collection Development Manual of the NLM and the NLM checklist used for selecting electronic journals. The reason for non-selection of the journal was recorded and the subject category, according to the Library of Congress Classification, was noted. Recorded reasons why journals were not selected: • Less than 15% of articles were within scope of NLM collection • Not enough articles published • Coverage (lacking original research or not for a scholarly audience) • Insufficient information to determine reason For journals where the criteria seemed to be met, the decision on selection to the NLM collection was reviewed. Main Results – The authors identified 571 journals that had articles in PMC but did not meet the criteria for inclusion in the NLM journal collection. The majority of these journals (73%) were outside the NLM scope and a further 10% had not published a sufficient number of articles to be considered. A further 3% were assessed as not intended for a scholarly audience or lacked original research and another 3% could not be reviewed due to lack of information available. There were 65 journals (11%) that were referred for further review as the selection criteria seemed to be met and 11 of these journals have subsequently been added to the NLM collection. This is in relation to 482 new print and electronic journals in total that were added to the NLM collection in 2009. However, only 369 of the 571 journals (65%) had one or more articles included in PMC; of these, 238 had one article and 33 had more than four articles in the archive. The reason that some journals had no articles in PMC at the time of this review was due to the time it takes to process new articles and embargos set by the publishers that restrict immediate listing on open access databases such as PMC. A number of these journals may also be new and may not have had a sufficient number of articles or enough information available to be able to include them in the NLM collection. To add context, the authors state that PMC contained over 115,000 NIH-funded articles by the end of November 2010. The subject areas these non-selected journals were classified under included Engineering (15%); Medicine (14%); Mathematics (10%); Chemistry (10%); and Computer Science (9%). Library Science was assigned to 2% of the journals. The Medicine journals were more likely than those in the other subject areas to be new journals without sufficient articles to be included in the NLM collection. Conclusion – When the journal title is out of the scope of the NLM collection, an individual article in that journal can still be included in PMC. This provides a solution to the problem of how to collect biomedical research that is not published in biomedical journals. This may be more important in the future as the field becomes more interdisciplinary. This also provides a useful resource for libraries and researchers searching for full-text biomedical articles. The authors conclude that analyzing the articles from the journals not selected for inclusion in the NLM collection will provide helpful information about the types of biomedical research being published in non-biomedical journals. This will highlight particular areas the NLM should pay attention to in the future.

2014 ◽  
Author(s):  
Mads S Liljekvist ◽  
Kristoffer Andresen ◽  
Hans-Christian Pommergaard ◽  
Jacob Rosenberg

Background: Open access (OA) journals disseminate research papers free of charge to the reader. Traditionally, biomedical researchers use databases like MEDLINE and EMBASE to discover new advances. However, biomedical OA journals might not fulfil such databases’ criteria, hindering dissemination. The Directory of Open Access Journals (DOAJ) is a database searchable at article level, focusing exclusively on OA journals. The aim of this study was to investigate DOAJ’s coverage of biomedical OA journals compared with the conventional biomedical databases. Methods: Information on all journals listed in five conventional biomedical databases (MEDLINE, National Library of Medicine, PubMed Central, EMBASE and SCOPUS) and DOAJ were gathered. Journals were included if they were 1) actively publishing, 2) full OA, 3) prospectively indexed in one or more database, and 4) of biomedical subject. Impact factor and journal language were also collected. DOAJ was compared with conventional databases regarding the proportion of journals covered, along with their impact factor and publishing language. The proportion of journals with articles indexed by DOAJ was determined. Results: In total, 3,236 biomedical OA journals were included in the study. Of the included journals, 86.7% were listed in DOAJ. Combined, the conventional biomedical databases listed 75.0% of the journals; 18.7 % in MEDLINE; 36.5% in PubMed Central; 51.5% in SCOPUS and 50.6% in EMBASE. Of the journals in DOAJ, 88.7% published in English and 20.6% had received impact factor for 2012 compared with 93.5% and 26.0%, respectively, for journals in the conventional biomedical databases. Of journals exclusively listed in DOAJ, only one had received an impact factor. A subset of 51.1% and 48.5% of the journals in DOAJ had articles indexed from 2012 and 2013, respectively. Conclusions: DOAJ is the most complete registry of biomedical OA journals compared with five conventional biomedical databases. However, DOAJ only indexes articles for half of the biomedical journals listed, making it an incomplete source for biomedical research papers in general.


2014 ◽  
Author(s):  
Mads S Liljekvist ◽  
Kristoffer Andresen ◽  
Hans-Christian Pommergaard ◽  
Jacob Rosenberg

Background: Open access (OA) journals disseminate research papers free of charge to the reader. Traditionally, biomedical researchers use databases like MEDLINE and EMBASE to discover new advances. However, biomedical OA journals might not fulfil such databases’ criteria, hindering dissemination. The Directory of Open Access Journals (DOAJ) is a database searchable at article level, focusing exclusively on OA journals. The aim of this study was to investigate DOAJ’s coverage of biomedical OA journals compared with the conventional biomedical databases. Methods: Information on all journals listed in five conventional biomedical databases (MEDLINE, National Library of Medicine, PubMed Central, EMBASE and SCOPUS) and DOAJ were gathered. Journals were included if they were 1) actively publishing, 2) full OA, 3) prospectively indexed in one or more database, and 4) of biomedical subject. Impact factor and journal language were also collected. DOAJ was compared with conventional databases regarding the proportion of journals covered, along with their impact factor and publishing language. The proportion of journals with articles indexed by DOAJ was determined. Results: In total, 3,236 biomedical OA journals were included in the study. Of the included journals, 86.7% were listed in DOAJ. Combined, the conventional biomedical databases listed 75.0% of the journals; 18.7 % in MEDLINE; 36.5% in PubMed Central; 51.5% in SCOPUS and 50.6% in EMBASE. Of the journals in DOAJ, 88.7% published in English and 20.6% had received impact factor for 2012 compared with 93.5% and 26.0%, respectively, for journals in the conventional biomedical databases. Of journals exclusively listed in DOAJ, only one had received an impact factor. A subset of 51.1% and 48.5% of the journals in DOAJ had articles indexed from 2012 and 2013, respectively. Conclusions: DOAJ is the most complete registry of biomedical OA journals compared with five conventional biomedical databases. However, DOAJ only indexes articles for half of the biomedical journals listed, making it an incomplete source for biomedical research papers in general.


Author(s):  
Frank H. Johnson

For those of you who are practicing forensic engineers, you are well aware that forensic engineering is a very demanding and exacting field. You also know that the subject areas in which a forensic engineer can become involved are of great variety. Many times a forensic engineer must address issues of safety with respect to a particular project. Most engineers are not specifically trained in the field of safety and usually rely on years of experience and background, as well as self-study into the field of safety. Even less is the number of engineers who are also trained in the field of system safety. The purpose of this paper is to introduce the subject of system safety to the field of forensic engineering and encourage you, as forensic engineers, to study system safety as an additional tool to use in the future.


Author(s):  
Lauren Topper ◽  
Diane Boehr

Objective: The National Institutes of Health (NIH) public access policy mandates that all articles containing NIH-funded research must be deposited into PubMed Central (PMC). The aim of this study was to assess publishing trends of journals that were not selected for the National Library of Medicine (NLM) collection but contain NIH-funded articles submitted to PMC in compliance with the public access policy. In addition, the authors investigated the degree to which NIH-funded research is published in journals that NLM does not collect due to concerns with the publishers.Methods: We analyzed bibliographic data from the NIH Manuscript Submission system for journals that were not selected for the NLM collection from August 2015 to August 2016. Publications (n=738) were analyzed by language, publishing country, publishing format, and subject, and the results were compared to a similar study of 2008–2009 data. In addition, publications were analyzed by whether their publishers are collected by NLM, as determined by transparency and adherence to publishing best practices.Results: Only a few differences were found between the studies. Most notably, while both studies revealed that most journals were not selected for the NLM collection because they were out of scope (i.e., not biomedical), we noted an increase in 2015–2016 in biomedical journals containing NIH-funded articles that were not added to the collection due to concerns with the publishers.Conclusions: While the current number of NIH-funded manuscripts being published by publishers that are not collected by NLM remains quite small, we noted a substantial increase between 2008–2009 and 2015–2016.


2014 ◽  
Vol 11 (01) ◽  
pp. 35-42
Author(s):  
M. Hermans

SummaryThe author presents his personal opinion inviting to discussion on the possible future role of psychiatrists. His view is based upon the many contacts with psychiatrists all over Europe, academicians and everyday professionals, as well as the familiarity with the literature. The list of papers referred to is based upon (1) the general interest concerning the subject when representing ideas also worded elsewhere, (2) the accessibility to psychiatrists and mental health professionals in Germany, (3) being costless downloadable for non-subscribers and (4) for some geographic aspects (e.g. Belgium, Spain, Sweden) and the latest scientific issues, addressing some authors directly.


Author(s):  
O. M. Korchazhkina

The article presents a methodological approach to studying iterative processes in the school course of geometry, by the example of constructing a Koch snowflake fractal curve and calculating a few characteristics of it. The interactive creative environment 1C:MathKit is chosen to visualize the method discussed. By performing repetitive constructions and algebraic calculations using ICT tools, students acquire a steady skill of work with geometric objects of various levels of complexity, comprehend the possibilities of mathematical interpretation of iterative processes in practice, and learn how to understand the dialectical unity between finite and infinite parameters of flat geometric figures. When students are getting familiar with such contradictory concepts and categories, that replenishes their experience of worldview comprehension of the subject areas they study through the concept of “big ideas”. The latter allows them to take a fresh look at the processes in the world around. The article is a matter of interest to schoolteachers of computer science and mathematics, as well as university scholars who teach the course “Concepts of modern natural sciences”.


2020 ◽  
Vol 20 (2) ◽  
pp. 7-13
Author(s):  
G. Stankevych ◽  
L. Dmytrenko ◽  
A. Kats ◽  
V. Shpak

In the future, in Ukraine it is planned to increase the sown area for cereals, legumes and oilseeds, to increase the gross grain harvest to 80 million tons, and its export abroad was increased twice. Intensive construction in the southern ports of Ukraine of grain transshipment terminals with large metal silos will solve the problem of increasing grain export in the future. At these powerful terminals, the bulk of the grain comes mainly by rail, and is shipped to water. The aim of the work was to study the characteristics of the grain receiving from railway transport to the grain transshipment terminal of LLC “Ukrelevatorprom” in order to improve its works efficiency. The object of the study was the development of technology of grain receiving at the grain transshipment terminal; the subject of research is cereals, legume sand oil crops, as well as data from daily volumes of receiving and dispensing operations at the grain transshipment terminal of LLC “Ukrelevatorprom” for 2015-2016. The studies were carried out on the basis of processing data from the consignment notes for 2015-2016, according to which there was a summed amount of grain (net) daily transported by the railway. Further processing of the obtained data was carried out by a combined graphoanalytical method, for which, on the basis of tabular values for each studied year, the corresponding histograms and graphs were built and the necessary indicators were determined. Analysis of the structure of grain crops supplied by railway to LLC “Ukrelevatorprom” in 2015 and 2016 and their ratio showed that the main share was occupied by cereal crops (78.0 % and 73.1 % respectively), which were mainly represented by corn, share which was significantly dominated by other crops (wheat of various classes and barley) and amounted to 45.8 % and 44.5 %, respectively, which can be explained by its high demand in the international grain market, in which Ukraine occupies a leading position. Oilseeds (rapeseed) were taken in accordance with 19.1 % and 14.9 %, and legumes (soybeans) — 2.9 % and 12.0 %. An analysis of the timing of the unloading of grain wagons (hopper cars) showed that the total duration of this process, depending on the crops, averages 37...59 minutes. The longest steps for unloading wagons are to determine the grain quality indicators, especially rapeseed, and to spill grain from the wagons, therefore, to reduce their duration, it is necessary to form feeds of wagons with grain batches of the same quality and use more modern express analyzers to determine grain quality indicators, which will increase the productivity of the grain receiving line from the railway. According to the research results, the enterprise has the potential to increase by about 30 % the volume of grain intake. It was established that the periods of the grain receipt at the enterprise in 2015-2016 amounted to 349 and 353 days, respectively, the actual coefficients of the daily irregularity Kdaily for the grain receipt from the railway in these years are equal to 1.47 and 1.52, and the monthly irregularity Kmonth, respectively 1.33 and 1.21, does not exceed the standard values Kdaily = 2.5 and Kmonth= 2.0. This made it possible to clarify the database from the actual characteristics of the process of grain receiving by railway and can be used in design and verification calculations of equipment in technological lines for receiving grain from railway transport, and will contribute to increasing the efficiency of grain transshipment terminals. 


Author(s):  
Aleksey Klokov ◽  
Evgenii Slobodyuk ◽  
Michael Charnine

The object of the research when writing the work was the body of text data collected together with the scientific advisor and the algorithms for processing the natural language of analysis. The stream of hypotheses has been tested against computer science scientific publications through a series of simulation experiments described in this dissertation. The subject of the research is algorithms and the results of the algorithms, aimed at predicting promising topics and terms that appear in the course of time in the scientific environment. The result of this work is a set of machine learning models, with the help of which experiments were carried out to identify promising terms and semantic relationships in the text corpus. The resulting models can be used for semantic processing and analysis of other subject areas.


2020 ◽  
pp. 301-323
Author(s):  
Natalya I. Kikilo ◽  

In the Macedonian literary language the analytic da-construction used in an independent clause has a wide range of possible modal meanings, the most common of which are imperative and optative. The present article offers a detailed analysis of the semantics and functions of the Macedonian optative da-construction based on fiction and journalistic texts. The first part of the article deals with the specificities of the optative as a category which primarily considers the subject of a wish. In accordance with the semantic characteristics of this category, optative constructions are used in those discourse text types where the speakers are explicitly designated (the most natural context for the optative is the dialogue). The analysis of the Macedonian material includes instances of atypical usage of the optative da-construction, in which the wish of the subject is not apparent and thereby produces new emotional tonalities perceptible to the reader of a fiction/journalistic text. The study describes Macedonian constructions involving two different verb forms: 1) present tense form (da + praes) and 2) imperfective form (da + impf). These constructions formally designate the hypothetical and counterfactual status of the optative situation, respectively. Thus, the examples in the analysis are ordered according to two types of constructions, which reflect the speaker’s view on the probability of the realisation of his/her wish. Unrealistic wishes can be communicated through the present da-construction, while the imperfective construction denotes situations in which the wish can be realised in the future. The second part of the article is devoted to performative optative da-constructions, which express formulas of speech etiquette, wishes and curses. The analysis demonstrates that these constructions lose their magical functions, when used outside of the ritual context, and begin to function as interjections.


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