Ampelography - An old technique with future uses: the case of minor varieties of Vitis vinifera L. from the Balearic Islands

OENO One ◽  
2011 ◽  
Vol 45 (3) ◽  
pp. 125 ◽  
Author(s):  
Sonia Garcia-Muñoz ◽  
Gregorio Muñoz-Organero ◽  
María Teresa De Andrés ◽  
Félix Cabello
Keyword(s):  
Vitis Vinifera ◽  
Balearic Islands ◽  
Vegetative Period ◽  
Qualitative And Quantitative ◽  
Mature Leaves ◽  
High Degree ◽  
First Time ◽  
Degree Of Similarity ◽  
Somatic Mutant

<p style="text-align: justify;"><strong>Aims</strong>: We report the genetic, phenological, agronomic and ampelographic characterization of 27 minor grapevine accessions (<em>Vitis vinifera </em>L.) from the Balearic Islands (Spain). The influence of occasional climatic phenomena (hailstorm) and the ampelographer’s experience on these characteristics was studied.</p><p style="text-align: justify;"><strong>Methods and results</strong>: In 2006 and 2007, grapevine accessions were analyzed using 57 OIV (Office International de la Vigne et du Vin) qualitative and quantitative descriptors and six microsatellite loci (SSR). Ampelography is a good preliminary technique for the identification of plant material, since the ampelographic description carried out showed a high degree of similarity between the repetitions of one single accession (higher than 90%), confirming the microsatellite results. The colour of the young leaf’s upper side (OIV-051), the juiciness of the flesh (OIV-232) and the firmness of berry flesh (OIV-235) were the most difficult characters to distinguish by ampelographers. In spite of the greater similarity found among the varieties studied, there were a few strong discriminant characters (OIV-225, OIV-084, OIV-053, and OIV-004). In addition, the ampelographic descriptions, agronomic parameters and phenology were influenced by hailstorm.</p><p style="text-align: justify;"><strong>Conclusions</strong>: The combination of morphological and molecular characterizations of 27 accessions collected in the Balearic Islands (Spain) allowed their classification into 17 different vine varieties. The genetic analysis identified Beba blanca as a possible somatic mutant derived from Beba roja. The hailstorm increased the vegetative period and mostly affected mature leaves, bunches, agronomic characteristics and must composition.</p><p style="text-align: justify;"><strong>Significance and impact of the study</strong>: The present work characterizes, for the first time, the ampelographic and molecular profiles of these minor varieties. It is provide agronomic information about old cultivars never published before which could be interesting for the grape growers.</p>

Characterization of SrBi2Nb2O9 Thin Films Prepared by Sol Gel Technique

1996 ◽  
Vol 459 ◽  
Author(s):  
E. Ching-Prado ◽  
W. Pérez ◽  
A. Reynés-Figueroa ◽  
R. S. Katiyar ◽  
D. Ravichandran ◽  
...  
Keyword(s):  
Thin Films ◽  
Raman Band ◽  
Sol Gel ◽  
Orthorhombic Symmetry ◽  
X Ray Diffraction ◽  
Ft Ir ◽  
Gel Technique ◽  
High Degree ◽  
First Time

ABSTRACTThin films of SrBi2Nb2O9 (SBN) with thicknesses of 0.1, 0.2, and 0.4 μ were grown by Sol-gel technique on silicon, and annealed at 650°C. The SBN films were investigated by Raman scatering for the first time. Raman spectra in some of the samples present bands around 60, 167, 196, 222, 302, 451, 560, 771, 837, and 863 cm−1, which correspond to the SBN formation. The study indicates that the films are inhomogeneous, and only in samples with thicknesses 0.4 μ the SBN material was found in some places. The prominent Raman band around 870 cm−1, which is the A1g mode of the orthorhombic symmetry, is assigned to the symmetric stretching of the NbO6 octahedrals. The frequency of this band is found to shift in different places in the same sample, as well as from sample to sample. The frequency shifts and the width of the Raman bands are discussed in term of ions in non-equilibrium positions. FT-IR spectra reveal a sharp peak at 1260 cm−1, and two broad bands around 995 and 772 cm−1. The bandwidths of the latter two bands are believed to be associated with the presence of a high degree of defects in the films. The experimental results of the SBN films are compared with those obtained in SBT (T=Ta) films. X-ray diffraction and SEM techniques are also used for the structural characterization.

scholarly journals Molecular Characterization of S Locus Genes, SLG and SRK, in a Pollen-Recessive Self-Incompatibility Haplotype of Brassica rapa L

Genetics ◽  
1998 ◽  
Vol 149 (3) ◽  
pp. 1587-1597 ◽  
Author(s):  
Katsunori Hatakeyama ◽  
Takeshi Takasaki ◽  
Masao Watanabe ◽  
Kokichi Hinata
Keyword(s):  
Brassica Rapa ◽  
Genomic Dna ◽  
Transmembrane Domain ◽  
Brassica Species ◽  
Self Incompatibility ◽  
S Locus ◽  
Intron Sequence ◽  
High Degree ◽  
Degree Of Similarity

Abstract In Brassica species that exhibit self-incompatibility, two genes, SLG and SRK, at the S locus are involved in the recognition reaction with self and non-self pollen. From a pollen-recessive S29 haplotype of Brassica rapa, both cDNA and genomic DNA clones for these two genes were isolated and characterized. The nucleotide sequence for the S domain of SRK29 showed a high degree of similarity with that of SLG29, and they belong to Class II type. RNA gel blot analysis showed that the transcript of SLG29 consisted of the first and second exons, and no other transcript containing any part of the intron sequence was detected. Because no transmembrane domain was encoded by the second exon of SLG29, SLG29 was designated a secreted type glycoprotein. SLGs of two other pollen-recessive haplotypes, S40 and S44, of B. rapa also had a similar structure to that of SLG29. Previously, SLG2 from a pollen-recessive haplotype, S2, of Brassica oleracea was found to produce two different transcripts, one for the secreted type glycoprotein and the other for a putative membrane-anchored form of SLG. Therefore, the nature of these SLGs from pollen-recessive haplotypes of B. rapa is different from that of SLG2 of B. oleracea.

scholarly journals Characterization of the Duffy-Binding-Like Domain of Plasmodium falciparum Blood-Stage Antigen 332

2011 ◽  
Vol 2011 ◽  
pp. 1-14 ◽  
Author(s):  
Sandra Nilsson ◽  
Kirsten Moll ◽  
Davide Angeletti ◽  
Letusa Albrecht ◽  
Inari Kursula ◽  
...  
Keyword(s):  
Plasmodium Falciparum ◽  
Immunofluorescence Microscopy ◽  
Homology Model ◽  
Cross Reactivity ◽  
Blood Stage ◽  
Conserved Domain ◽  
Erythrocyte Binding ◽  
High Degree ◽  
Degree Of Similarity

Studies on Pf332, a major Plasmodium falciparum blood-stage antigen, have largely been hampered by the cross-reactive nature of antibodies generated against the molecule due to its high content of repeats, which are present in other malaria antigens. We previously reported the identification of a conserved domain in Pf332 with a high degree of similarity to the Duffy-binding-like (DBL) domains of the erythrocyte-binding-like (EBL) family. We here describe that antibodies towards Pf332-DBL are induced after repeated exposure to P. falciparum and that they are acquired early in life in areas of intense malaria transmission. Furthermore, a homology model of Pf332-DBL was found to be similar to the structure of the EBL-DBLs. Despite their similarities, antibodies towards Pf332-DBL did not display any cross-reactivity with EBL-proteins as demonstrated by immunofluorescence microscopy, Western blotting, and peptide microarray. Thus the DBL domain is an attractive region to use in further studies on the giant Pf332 molecule.

scholarly journals Molecular characterization of begomoviruses and DNA satellites from Vietnam: additional evidence that the New World geminiviruses were present in the Old World prior to continental separation

2008 ◽  
Vol 89 (1) ◽  
pp. 312-326 ◽  
Author(s):  
Cuong Ha ◽  
Steven Coombs ◽  
Peter Revill ◽  
Rob Harding ◽  
Man Vu ◽  
...  
Keyword(s):  
New World ◽  
Bipartite Begomoviruses ◽  
Bipartite Begomovirus ◽  
Stem Loop ◽  
Old World ◽  
Recombinant Viruses ◽  
Virus Diversity ◽  
High Degree ◽  
First Time

Sixteen viruses, belonging to 16 species of begomovirus, that infect crops and weeds in Vietnam were identified. Sequence analysis of the complete genomes showed that nine of the viruses (six monopartite and three bipartite) belong to novel species and five of them were identified in Vietnam for the first time. Additionally, eight DNA-β and three nanovirus-like DNA-1 molecules were also found associated with some of the monopartite viruses. Five of the DNA-β molecules were novel. Importantly, a second bipartite begomovirus, Corchorus golden mosaic virus, shared several features with the previously characterized virus Corchorus yellow vein virus and with other bipartite begomoviruses from the New World, supporting the hypothesis that New World-like viruses were present in the Old World. This, together with a high degree of virus diversity that included putative recombinant viruses, satellite molecules and viruses with previously undescribed variability in the putative stem–loop sequences, suggested that South-East Asia, and Vietnam in particular, is one of the origins of begomovirus diversity.

scholarly journals Physicochemical and Biological Characterization of a Biosimilar Trastuzumab

2015 ◽  
Vol 2015 ◽  
pp. 1-10 ◽  
Author(s):  
Carlos A. López-Morales ◽  
Mariana P. Miranda-Hernández ◽  
L. Carmina Juárez-Bayardo ◽  
Nancy D. Ramírez-Ibáñez ◽  
Alexis J. Romero-Díaz ◽  
...  
Keyword(s):  
Reference Product ◽  
World Health ◽  
Malignant Neoplasms ◽  
Pharmacological Studies ◽  
Comparability Exercise ◽  
Potential Impact ◽  
Health Organization ◽  
High Degree ◽  
Degree Of Similarity

According to the World Health Organization, the incidence of malignant neoplasms and endocrine, blood, and immune disorders will increase in the upcoming decades along with the demand of affordable treatments. In response to this need, the development of biosimilar drugs is increasing worldwide. The approval of biosimilars relies on the compliance with international guidelines, starting with the demonstration of similarity in their physicochemical and functional properties against the reference product. Subsequent clinical studies are performed to demonstrate similar pharmacological behavior and to diminish the uncertainty related to their safety and efficacy. Herein we present a comparability exercise between a biosimilar trastuzumab and its reference product, by using a hierarchical strategy with an orthogonal approach, to assess the physicochemical and biological attributes with potential impact on its pharmacokinetics, pharmacodynamics, and immunogenicity. Our results showed that the high degree of similarity in the physicochemical attributes of the biosimilar trastuzumab with respect to the reference product resulted in comparable biological activity, demonstrating that a controlled process is able to provide consistently the expected product. These results also constitute the basis for the design of subsequent delimited pharmacological studies, as they diminish the uncertainty of exhibiting different profiles.

scholarly journals Characterization of Two Campylobacter jejuni Strains for Use in Volunteer Experimental-Infection Studies

2008 ◽  
Vol 76 (12) ◽  
pp. 5655-5667 ◽  
Author(s):  
Frédéric Poly ◽  
Timothy D. Read ◽  
Yu-Han Chen ◽  
Mario A. Monteiro ◽  
Oralak Serichantalergs ◽  
...  
Keyword(s):  
Southeast Asia ◽  
Campylobacter Jejuni ◽  
Experimental Infection ◽  
Type Strain ◽  
Molecular Mimicry ◽  
Clinical Isolates ◽  
Capsule Locus ◽  
High Degree ◽  
Degree Of Similarity

ABSTRACT The development of vaccines against Campylobacter jejuni would be facilitated by the ability to perform phase II challenge studies. However, molecular mimicry of the lipooligosaccharide (LOS) of most C. jejuni strains with human gangliosides presents safety concerns about the development of Guillain-Barré syndrome. Clinical isolates of C. jejuni that appeared to lack genes for the synthesis of ganglioside mimics were identified by DNA probe analyses. Two clinical isolates from Southeast Asia (strains BH-01-0142 and CG8421) were determined to express the LOS type containing N-acetyl quinovosamine. No ganglioside structures were observed to be present in the LOSs of these strains, and pyrosequence analyses of the genomes of both strains confirmed the absence of genes involved in ganglioside mimicry. The capsule polysaccharide (CPS) of BH-01-0142 was determined to be composed of galactose (Gal), 6-deoxy-ido-heptose, and, in smaller amounts, d-glycero-d-ido-heptose, and the CPS of CG8421 was observed to contain Gal, 6-deoxy-altro-heptose, N-acetyl-glucosamine, and minor amounts of 6-deoxy-3-O-Me-altro-heptose. Both CPSs were shown to carry O-methyl-phosphoramidate. The two genomes contained strain-specific zones, some of which could be traced to a plasmid origin, and both contained a large chromosomal insertion related to the CJEI3 element of C. jejuni RM1221. The genomes of both strains shared a high degree of similarity to each other and, with the exception of the capsule locus of CG8421, to the type strain of the HS3 serotype, TGH9011.

scholarly journals Molecular cloning and characterization of a grapevine (Vitis vinifera L.) serotonin N-acetyltransferase (VvSNAT2) gene involved in plant defense

BMC Genomics ◽  
2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Yihe Yu ◽  
Lu Bian ◽  
Zeling Jiao ◽  
Keke Yu ◽  
Yutong Wan ◽  
...  
Keyword(s):  
Transgenic Plants ◽  
Vitis Vinifera ◽  
Plant Defense ◽  
Marker Genes ◽  
Vitis Vinifera L ◽  
Melatonin Treatment ◽  
Gene Encoding ◽  
Ja Signaling ◽  
First Time

Abstract Background Melatonin is a ubiquitous molecule and exists across kingdoms. Studies on melatonin in plants have mainly focused on its physiological influence on growth and development, and on its biosynthesis. A number of studies have been conducted on the melatonin content and exogenous melatonin treatment of grapevine (Vitis vinifera L.). However, key genes or enzymes of the melatonin biosynthetic pathway remain unclear. Results In this study, we cloned and identified the gene encoding serotonin N-acetyltransferase (SNAT) in grapevine (VvSNAT2). The VvSNAT2 protein was identified from a collection of 30 members of the grapevine GCN5-related N-acetyltransferase (GNAT) superfamily. Phylogenetic and protein sublocalization analyses showed that the candidate gene VvGNAT16 is VvSNAT2. Characterization of VvSNAT2 showed that its enzymatic activity is highest at a pH of 8.8 and a temperature of 45 °C. Analysis of enzyme kinetics showed the values of Km and Vmax of VvSNAT2 using serotonin were 392.5 μM and 836 pmol/min/mg protein, respectively. The expression of VvSNAT2 was induced by melatonin treatment and pathogen inoculation. Overexpression of VvSNAT2 in Arabidopsis resulted in greater accumulation of melatonin and chlorophyll and enhanced resistance to powdery mildew in the transgenic plants compared with the wild type (WT). Additionally, our data showed that the marker genes in the salicylic acid (SA) signaling pathway were expressed to higher levels in the transgenic plants compared with the WT. Conclusions The VvSNAT2 gene was cloned and identified in grapevine for the first time. Our results indicate that VvSNAT2 overexpression activates the SA and JA signaling pathways; however, the SA pathway plays a central role in VvSNAT2-mediated plant defense.

scholarly journals Identification and characterization of Saccharomyces cerevisiae yapsin 3, a new member of the yapsin family of aspartic proteases encoded by the YPS3 gene

1999 ◽  
Vol 339 (2) ◽  
pp. 407-411 ◽  
Author(s):  
Vicki OLSEN ◽  
Niamh X. CAWLEY ◽  
Jakob BRANDT ◽  
Michi EGEL-MITANI ◽  
Y. Peng LOH
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Amino Acid ◽  
Cleavage Sites ◽  
Basic Residue ◽  
Aspartic Proteases ◽  
N Terminus ◽  
High Degree ◽  
Identification And Characterization ◽  
Degree Of Similarity

A new aspartic protease from Saccharomyces cerevisiae, with a high degree of similarity with yapsin 1 and yapsin 2 and a specificity for basic residue cleavage sites of prohormones, has been cloned. This enzyme was named yapsin 3. Expression of a C-terminally truncated non-membrane anchored yapsin 3 in yeast yielded a heterogeneous protein between 135–200 kDa which, upon treatment with endoglycosidase H, migrated as a 60 kDa form. Amino-acid analysis of the N-terminus of expressed yapsin 3 revealed two different N-terminal residues, serine-48 and phenylalanine-54, which followed a dibasic and a monobasic residue respectively. Cleavage of several prohormones by non-anchored yapsin 3 revealed a specificity distinct from that of yapsin 1.

scholarly journals Molecular characterization of the honeybee Apis mellifera carnica in Serbia

2009 ◽  
Vol 61 (4) ◽  
pp. 587-598 ◽  
Author(s):  
N. Nedic ◽  
L. Stanisavljevic ◽  
M. Mladenovic ◽  
Jelena Stanisavljevic
Keyword(s):  
Comparative Analysis ◽  
Similarity Index ◽  
Phylogenetic Group ◽  
The Novel ◽  
Polymorphic Position ◽  
Queen Bees ◽  
Productive Traits ◽  
High Degree ◽  
Degree Of Similarity

The sequences COI-COII of the mitochondrial DNA region in honeybee from four geographically distant regions in Serbia (Vrsac, Knjazevac, Kraljevo, and Vranje) are analyzed. The research was conducted on eight different, previously selected honeybee lines preserved (linear selection) in the four reprocenters for queen bees. All four studied honeybee lines differ in morphological and productive traits, each being specific for the corresponding region. In addition to analysis of the mtDNA sequences in Serbian honeybee, a comparative analysis of the phylogenetic group of so far known C2 haplotypes was also performed. The results revealed two novel polymorphic positions in the COI-COII mtDNA region, viz., h2 at position 3474 and l2 at position 3534 (a T nucleotide deletion in both cases) in honeybees from the regions of Vranje and Knjazevac, respectively. Two novel mtDNA haplotypes in the honeybee C2 phylogenetic group, together with C2I (the new polymorphic position l2 and G-A transition at position 3587) and C2J (the new polymorphic position h2), are described. Also, comparative analysis performed on sequences from GenBank data showed a high degree of similarity (similarity index = 99.4%) between the novel C2I mtDNA haplotype and an A. m. cypria haplotype originating from Turkey. Certain domestic Kranjska honeybee populations from Serbia represent an autochthonous gene pool that can be of great importance for further presentation of honeybee biodiversity. The present paper contributes to characterization of mtDNA in honeybee of Serbia.

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