scholarly journals Taxonomy and Phylogenetic Research on Ralstonia solanacearum: A Complex Pathogen with Extraordinary Economic Consequences

Author(s):  
Sujan Paudel ◽  
Shefali Dobhal ◽  
Anne M. Alvarez ◽  
Mohammad Arif

The bacterial wilt pathogen, first known as Bacillus solanacearum, has undergone numerous taxonomic changes since its first description in 1896. The history and significance of this pathogen is covered in this review with an emphasis on the advances in technology that were used to support each reclassification that finally led to the current separation of Ralstonia solanacearum into three genomic species. Frequent name changes occurred as methodology transitioned from phenotypic, biochemical, and molecular studies, to genomics and functional genomics. The diversity, wide host range and geographical distribution of R. solanacearum has resulted in its inclusion in a “species complex” as genomic analyses of elucidated phylogenetic relationships among strains. Current advances in phylogenetics and functional genomics now open new avenues for research into the epidemiology and control of the devastating bacterial wilt disease.

Pathogens ◽  
2020 ◽  
Vol 9 (11) ◽  
pp. 886
Author(s):  
Sujan Paudel ◽  
Shefali Dobhal ◽  
Anne M. Alvarez ◽  
Mohammad Arif

The bacterial wilt pathogen, first known as Bacillus solanacearum, has undergone numerous taxonomic changes since its first description in 1896. The history and significance of this pathogen is covered in this review with an emphasis on the advances in technology that were used to support each reclassification that finally led to the current separation of Ralstonia solanacearum into three genomic species. Frequent name changes occurred as methodology transitioned from phenotypic, biochemical, and molecular studies, to genomics and functional genomics. The diversity, wide host range, and geographical distribution of the bacterial wilt pathogen resulted in its division into three species as genomic analyses elucidated phylogenetic relationships among strains. Current advances in phylogenetics and functional genomics now open new avenues for research into epidemiology and control of the devastating bacterial wilt disease.


2017 ◽  
Vol 18 (4) ◽  
pp. 1562-1567
Author(s):  
YULMIRA YANTI ◽  
TRIMURTI HABAZAR ◽  
REFLINALDON REFLINALDON ◽  
CHAINUR RAHMAN NASUTION ◽  
SRIMANO FELIA

Yanti Y, Habazar T, Reflinaldon, Nasution CR, Felia S. 2017. Indigenous Bacillus spp. ability to growth promoting activities and control bacterial wilt disease (Ralstonia solanacearum). Biodiversitas 18: 1562-1567. Among the species of Plant Growth Promoting Rhizobacteria, Bacillus spp. has been found to provide beneficial effects to different plant species. Based on our previous research from in planta screening’s method, we found six indigenous strains of Bacillus spp., which had the ability to control bacterial wilt and increased growth and yields of chili. Those were Bacillus subtilis BSn5,q Bacillus sp. RD-AZPVI-03, Bacillus sp. Y81-1, B.cereus strain C38/15, B.cereus strain APSB-03, and B. subtilis strain CIFT-MFB-4158A. This research aimed to characterize the mechanism of selected Bacillus spp. as biocontrol agents of R. solanacearum and as biofertilizer of chili in vitro. We have observed the biocontrol characters (production of HCN, siderophore, biosurfactant, protease, root colonization, and antibiotic), and biofertilizer’s characters (production of Indole Acetic Acid (IAA), ammonia and phosphate solubilization) of Bacillus spp. All strains had ability to produce variable concentrations of IAA, B.subtilis strain CIFT-MFB-4158A can produce siderophore, all isolates cannot produce HCN and biosurfactant, 4 isolates can produce protease. Based on the ability to colonize roots, B.subtilis strain CIFT-MFB-4158A had the best ability to colonize root surface (4.17 x 105 CFU/g root), while B. subtilis BSn5 had the best ability to colonize internal roots (2.08 x 105 CFU/g), and 2 Bacillus strains can suppress R. solanacearum in vitro.


2020 ◽  
Vol 14 (1) ◽  
pp. 8-20
Author(s):  
Fery Abdul Choliq ◽  
Mintarto Martosudiro ◽  
Istiqomah Istiqomah ◽  
Muhammad Fanhash Nijami

Tomato is the top priority in the development of horticultural crops. The obstacle which mostly encountered is Ralstonia solanacearum pathogen attack. Bacteriophage can cause bacterial lysis after they they develop themselves inside the bacteria. The specific of the bacteriophage can provide result quickly, accurately, and efficiently so that it can be used as an alternative to control bacterial wilt disease R. solanacearum environmentally friendly. This study aims to find out the effectiveness of bacteriophage to control the bacterial wilt disease R. solanacearum. The testing method are plaque assay, bacteriophage infections test in various dilutions, bacteriophage infection test in a liquid medium, and transmission electron microscopy test. In the greenhouse scale testing using a Completely Randomized Design (CRD) with 6 treatments and 4 replications. Quantitative data were analyzed using analysis of variance 5% error level and followed by least significant different  test level of 5%. The results showed that bacteriophages can infect R. solanacearum. Bacteriophage can infect bacteria R. solanacearum indicated by the appearance of plaques in NA media, the declining value of absorbance spectophotometer, and can lyse bacterial cells from dilutions 10-1 to 10-9. The morphology of bacteriophages that infect R. solanacearum have hexagonal head structure and it have which is with a size of 200 nm. In the greenhouse scale showed that the symptoms of R. solanacearum appear at 29 days after inoculation. Application of bacteriophages can control R. solanacearum with lower percentage than the control treatment.


2019 ◽  
Vol 2 (3) ◽  
pp. 89-96 ◽  
Author(s):  
Rachmad Saputra ◽  
Triwidodo Arwiyanto ◽  
Arif Wibowo

Streptomyces sp. bacteria have the potential to produce antibiotic compounds, which are one of the mechanisms that are widely used in biological control. However, in general, biological control mechanisms also occur through competition, cell wall degradation and induced resistance. This study was aimed to determine the physiological, biochemical and molecular characteristics of two isolates of Streptomyces sp. (S-4 and S16 isolates) isolated from the tomatoes roots, and to find out their ability to control Ralstonia solanacearum, which causes bacterial wilt disease on a wide range of hosts. The results showed both Streptomyces sp. isolates had several different physiological and biochemical characteristics and had a different ability to inhibit R. solanacearum in vitro. Streptomyces sp. S-16 isolate had a high similarity with Streptomyces diastaticus subsp. ardesiacus strain NRRL B-1773T based on the molecular identification results. Further research needs to be done to see the potential inhibition of the two Streptomyces isolates in inhibiting the development of bacterial wilt disease in tomato plants caused by R. solanacearum.


Plant Science ◽  
2019 ◽  
Vol 280 ◽  
pp. 197-205 ◽  
Author(s):  
Tâmara P. Morais ◽  
Paulo A. Zaini ◽  
Sandeep Chakraborty ◽  
Hossein Gouran ◽  
Camila P. Carvalho ◽  
...  

2010 ◽  
Vol 23 (8) ◽  
pp. 1042-1052 ◽  
Author(s):  
Jennifer Colburn-Clifford ◽  
Caitilyn Allen

Ralstonia solanacearum race 3 biovar 2 (R3bv2) is an economically important soilborne plant pathogen that causes bacterial wilt disease by infecting host plant roots and colonizing the xylem vessels. Little is known about R3bv2 behavior in the host rhizosphere and early in bacterial wilt pathogenesis. To explore this part of the disease cycle, we used a novel taxis-based promoter-trapping strategy to identify pathogen genes induced in the plant rhizosphere. This screen identified several rex (root exudate expressed) genes whose promoters were upregulated in the presence of tomato root exudates. One rex gene encodes an assembly protein for a high affinity cbb3-type cytochrome c oxidase (cbb3-cco) that enables respiration in low-oxygen conditions in other bacteria. R3bv2 cbb3-cco gene expression increased under low-oxygen conditions, and a cbb3-cco mutant strain grew more slowly in a microaerobic environment (0.5% O2). Although the cco mutant could still wilt tomato plants, symptom onset was significantly delayed relative to the wild-type parent strain. Further, the cco mutant did not colonize host stems or adhere to roots as effectively as wild type. These results suggest that R3bv2 encounters low-oxygen environments during its interactions with host plants and that the pathogen depends on this oxidase to help it succeed in planta.


2013 ◽  
Vol 14 (1) ◽  
pp. 32
Author(s):  
Jonathan M. Jacobs ◽  
Caitilyn Allen

The bacterial wilt pathogen Ralstonia solanacearum causes major agricultural losses on many crop hosts worldwide. Resistance breeding is the best way to control bacterial wilt disease, but the biological basis for bacterial wilt resistance is unknown. We found that R. solanacearum uses an AvrE-family, Type III-secreted effector called PopS to overcome plant defenses and cause disease on tomato. Orthologs of PopS are widely conserved across distinct classes of plant pathogenic bacteria and could provide novel, durable targets for resistance. Accepted for publication 25 September 2013. Published 25 November 2013.


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