Abundances of Tetracycline Resistance Genes and Tetracycline Antibiotics during Anaerobic Digestion of Swine Waste

2019 ◽  
Vol 48 (1) ◽  
pp. 171-178 ◽  
Author(s):  
Melanie Couch ◽  
Getahun E. Agga ◽  
John Kasumba ◽  
Rohan R. Parekh ◽  
John H. Loughrin ◽  
...  
Keyword(s):  
Anaerobic Digestion ◽  
Resistance Genes ◽  
Tetracycline Resistance ◽  
Swine Waste ◽  
Tetracycline Antibiotics ◽  
Tetracycline Resistance Genes

scholarly journals Diversity of the Tetracycline Mobilome within a Chinese Pig Manure Sample

2016 ◽  
Vol 82 (21) ◽  
pp. 6454-6462 ◽  
Author(s):  
Sébastien Olivier Leclercq ◽  
Chao Wang ◽  
Yaxin Zhu ◽  
Hai Wu ◽  
Xiaochen Du ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Efflux Pump ◽  
Genetic Resistance ◽  
Antibiotic Resistance Genes ◽  
Tetracycline Resistance ◽  
Animal Manure ◽  
Pig Manure ◽  
Tetracycline Antibiotics ◽  
Tetracycline Resistance Genes

ABSTRACTTetracycline antibiotics are widely used in livestock, and tetracycline resistance genes (TRG) are frequently reported in the manure of farmed animals. However, the diversity of TRG-carrying transposons in manure has still been rarely investigated. Using a culture-free functional metagenomic procedure, combined with large-insert library construction and sequencing, bioinformatic analyses, and functional experiments, we identified 17 distinct TRGs in a single pig manure sample, including two newtetgenes:tet(59), encoding a tetracycline efflux pump, andtet(W/N/W), encoding mosaic ribosomal protection. Our study also revealed six new TRG-carrying putative nonconjugative transposons: Tn5706-like transposon Tn6298, IS200/605-related transposon Tn6303, Tn3family transposon Tn6299, and three ISCR2-related transposons, Tn62300, Tn62301, and Tn62302.IMPORTANCEFertilization of agricultural fields with animal manure is believed to play a major role in antibiotic resistance dissemination in the environment. There is growing concern for the possible spread of antibiotic resistance from the environment to humans since genetic resistance determinants may be located in transposons and other mobile genetic elements potentially transferable to pathogens. Among the various antibiotic resistance genes found in manure, tetracycline resistance genes (TRGs) are some of the most common. The present study provides a detailed snapshot of the tetracycline mobilome in a single pig manure sample, revealing an unappreciated diversity of TRGs and potential TRG mobility vectors. Our precise identification of the TRG-carrying units will enable us to investigate in more details their mobility effectiveness.

scholarly journals Antimicrobial Use and Resistance in Swine Waste Treatment Systems

2006 ◽  
Vol 72 (12) ◽  
pp. 7813-7820 ◽  
Author(s):  
Archana Jindal ◽  
Svetlana Kocherginskaya ◽  
Asma Mehboob ◽  
Matthew Robert ◽  
Roderick I. Mackie ◽  
...  
Keyword(s):  
Resistance Genes ◽  
Waste Treatment ◽  
Growth Promotion ◽  
Tetracycline Resistance ◽  
Land Application ◽  
Molecular Methods ◽  
23S Rrna ◽  
Organic Farm ◽  
Tetracycline Resistance Genes ◽  
Fecal Streptococci

ABSTRACT Chlortetracycline and the macrolide tylosin were identified as commonly used antimicrobials for growth promotion and prophylaxis in swine production. Resistance to these antimicrobials was measured throughout the waste treatment processes at five swine farms by culture-based and molecular methods. Conventional farm samples had the highest levels of resistance with both culture-based and molecular methods and had similar levels of resistance despite differences in antimicrobial usage. The levels of resistance in organic farm samples, where no antimicrobials were used, were very low by a culture-based method targeting fecal streptococci. However, when the same samples were analyzed with a molecular method detecting methylation of a specific nucleotide in the 23S rRNA that results in resistance to macrolides, lincosamides, and streptogramin B (MLSB), an unexpectedly high level of resistant rRNA (approximately 50%) was observed, suggesting that the fecal streptococci were not an appropriate target group to evaluate resistance in the overall microbial community and that background levels of MLSB resistance may be substantial. All of the feed samples tested, including those from the organic farm, contained tetracycline resistance genes. Generally, the same tetracycline resistance genes and frequency of detection were found in the manure and lagoon samples for each commercial farm. The levels of tetracycline and MLSB resistance remained high throughout the waste treatment systems, suggesting that the potential impact of land application of treated wastes and waste treatment by-products on environmental levels of resistance should be investigated further.

scholarly journals Tetracycline Susceptibility Testing and Resistance Genes in Isolates of Acinetobacter baumannii-Acinetobacter calcoaceticus Complex from a U.S. Military Hospital

2009 ◽  
Vol 53 (6) ◽  
pp. 2693-2695 ◽  
Author(s):  
Kevin S. Akers ◽  
Katrin Mende ◽  
Heather C. Yun ◽  
Duane R. Hospenthal ◽  
Miriam L. Beckius ◽  
...  
Keyword(s):  
Acinetobacter Baumannii ◽  
Resistance Genes ◽  
Susceptibility Testing ◽  
Tetracycline Resistance ◽  
Acinetobacter Calcoaceticus ◽  
Multidrug Resistant ◽  
Military Hospital ◽  
Tetracycline Resistance Genes ◽  
Testing Method

ABSTRACT Infections with multidrug-resistant Acinetobacter baumannii-Acinetobacter calcoaceticus complex bacteria complicate the care of U.S. military personnel and civilians worldwide. One hundred thirty-three isolates from 89 patients at our facility during 2006 and 2007 were tested by disk diffusion, Etest, and broth microdilution for susceptibility to tetracycline, doxycycline, minocycline, and tigecycline. Minocycline was the most active in vitro, with 90% of the isolates tested susceptible. Susceptibilities varied significantly with the testing method. The acquired tetracycline resistance genes tetA, tetB, and tetA(39) were present in the isolates.

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