scholarly journals Coprological survey of protostrongylid infections in antelopes from Souss-Massa National Park (Morocco)

2020 ◽  
Vol 57 (4) ◽  
pp. 306-313
Author(s):  
A. Saidi ◽  
R. Mimouni ◽  
F. Hamadi ◽  
W. Oubrou
Keyword(s):  
National Park ◽  
Parasite Species ◽  
Pcr Amplification ◽  
Internal Transcribed Spacer Region ◽  
Mean Values ◽  
Rdna Its ◽  
Baermann Technique ◽  
In Captivity ◽  
Second Internal Transcribed Spacer ◽  
Muellerius Capillaris

SummaryProtostrongylids, small nematode lungworms, are an integral part of the wild ruminant helminth community, which can damage animals’ health when they are held in captivity or semi-captive conditions. The Sahelo-Saharan antelope species dorcas gazelle (Gazella dorcas), the scimitar-horned oryx (Oryx dammah), and the addax (Addax nasomacculatus), reintroduced to Souss-Massa National Park in Morocco, could be host to many species of Protostrongylids. This study was conducted from January to July 2015 to identify infecting parasite species, and determine their prevalence and abundance in all three antelope species. A total of 180 individual fecal samples were collected, morphologically examined by the Baermann technique, and molecularly identified by PCR amplification and sequencing of the second internal transcribed spacer region of the rDNA (ITS-2).Two parasite species were found in the three antelope populations: Muellerius capillaris and Neostrongylus linearis. The prevalence scores recorded for M. capillaris were 98.40 % in the addax, 96.70 % in dorcas gazelle, and 28.40 % in the oryx. The prevalence rates of N. linearis were 60 % in the addax, 23.40 % in dorcas gazelle, and 90 % in the oryx. Excreted larvae were quantified by LPG (larvae per gram) counting: for M. capillaris, the LPG mean values were 92.94 in the addax, 133.09 in dorcas gazelle, and 1.48 in the oryx; and for N. linearis, the LPG mean values were 6.02 in the addax, 1.37 in dorcas gazelle, and 32.81 in the oryx. These findings indicate that the three species of antelopes are infected with Muellerius capillaris and Neostrongylus linearis to varying degrees in intensity and prevalence.

scholarly journals Gastrointestinal Nematode Infections in Antelopes from Morocco: A Coprological Survey

2021 ◽  
Vol 71 (1) ◽  
pp. 47-60
Author(s):  
Saidi Aissa ◽  
Mimouni Rachida ◽  
Hamadi Fatima ◽  
Oubrou Widade
Keyword(s):  
National Park ◽  
Gastrointestinal Nematode ◽  
First Record ◽  
Internal Transcribed Spacer Region ◽  
Rdna Its ◽  
Faecal Samples ◽  
The Mean ◽  
Sub Saharan ◽  
Second Internal Transcribed Spacer ◽  
Camelostrongylus Mentulatus

Abstract This study examined the gastrointestinal parasitological status of three endangered Sub-Saharan antelope species (Addax nasomaculatus, Oryx dammah, Gazella dorcas) hosted at Souss-Massa National Park in Morocco. A total of 254 faecal samples (80 samples from the addax population, 81 from the oryx population and 93 from the dorcas population) were analysed to determine the prevalence and the intensity of the parasites in host faeces (expressed as the mean EPG: egg per gram), using microscopic methods (Flotation and McMaster) and the molecular identification of parasites using PCR and sequencing of the second internal transcribed spacer region of the rDNA (ITS-2). The prevalence results in the addax, oryx and dorcas gazelle were 43.7%, 2.4%, and 61.3%, respectively, for Nematodirus spp.; 21.2%, 12.3%, and 16.13%, respectively, for Trichuris spp.; and 36.2%, 39.5%, and 53.7%, respectively, for other, undistinguished strongylids. The means of EPG values for parasites in addax, oryx and dorcas gazelle were 8.9, 2.4, and 61.3, respectively, for Nematodirus spp.; 4.3, 2.4, and 4.8, respectively, for Trichuris spp.; and 18.1, 16.6, and 50.1, respectively, for other undistinguished strongylids. Sequencing of the ITS-2 rDNA region of the isolated parasites allowed the identification of Camelostrongylus mentulatus and Nematodirus spathiger in these three antelope species. We can conclude that the studied antelopes are infected at tolerating levels with the first record of Camelostrongylus mentulatus and Nematodirus spathiger in those antelopes in Morocco.

scholarly journals Inocybe brijunica sp. nov., a New Ectomycorrhizal Fungus from Mediterranean Croatia Revealed by Morphology and Multilocus Phylogenetic Analysis

2021 ◽  
Vol 7 (3) ◽  
pp. 199
Author(s):  
Armin Mešić ◽  
Danny Haelewaters ◽  
Zdenko Tkalčec ◽  
Jingyu Liu ◽  
Ivana Kušan ◽  
...  
Keyword(s):  
Rna Polymerase Ii ◽  
National Park ◽  
Hot Spot ◽  
Phylogenetic Reconstruction ◽  
Ectomycorrhizal Fungus ◽  
Alkaline Solutions ◽  
Rrna Gene ◽  
28S Rrna ◽  
Internal Transcribed Spacer Region ◽  
Biogeographical Region

A new ectomycorrhizal species was discovered during the first survey of fungal diversity at Brijuni National Park (Croatia), which consists of 14 islands and islets. The National Park is located in the Mediterranean Biogeographical Region, a prominent climate change hot-spot. Inocybe brijunica sp. nov., from sect. Hysterices (Agaricales, Inocybaceae), is described based on morphology and multilocus phylogenetic data. The holotype collection was found at the edge between grassland and Quercus ilex forest with a few planted Pinus pinea trees, on Veli Brijun Island, the largest island of the archipelago. It is easily recognized by a conspicuous orange to orange–red–brown membranaceous surface layer located at or just above the basal part of the stipe. Other distinctive features of I. brijunica are the medium brown, radially fibrillose to rimose pileus; pale to medium brown stipe with fugacious cortina; relatively small, amygdaliform to phaseoliform, and smooth basidiospores, measuring ca. 6.5–9 × 4–5.5 µm; thick-walled, utriform, lageniform or fusiform pleurocystidia (lamprocystidia) with crystals and mostly not yellowing in alkaline solutions; cheilocystidia of two types (lamprocystidia and leptocystidia); and the presence of abundant caulocystidia only in the upper 2–3 mm of the stipe. Phylogenetic reconstruction of a concatenated dataset of the internal transcribed spacer region (ITS), the nuclear 28S rRNA gene (nrLSU), and the second largest subunit of RNA polymerase II (rpb2) resolved I. brijunica and I. glabripes as sister species.

Effects of collection zones and storage on hatchability and survival of feral helmeted guineafowl (Numida meleagris galleata pallas) eggs

2021 ◽  
Vol 18 (1) ◽  
pp. 74-81
Author(s):  
A.A. Yusuf ◽  
O.A. Jayeola ◽  
I.O.O. Osunsina ◽  
G.A. Dedeke
Keyword(s):  
National Park ◽  
Captive Breeding ◽  
Storage Systems ◽  
Ecological Zones ◽  
Numida Meleagris ◽  
Significant Difference ◽  
In Captivity ◽  
Protein Supply ◽  
And Storage ◽  
Kainji Lake

The desire to shore up the shortfall in protein supply, the increased awareness of the importance of cholesterol free animal protein, like guineafowl, and the need to conserve their wild genes, have necessitated studies on improved captive breeding of feral helmeted guineafowl. Hence, this study was aimed at determining the effects of ecological zones and storage systems on the guineafowl eggs. Guineafowl eggs (n=214), were collected from identified and monitored-nests within the Kainji Lake National Park (KLNP) and Old Oyo National Park (OONP). Out of 91 eggs collected from KLNP, 32 and 38 were stored at room temperature (RT-21-25°C) and refrigerator (RF-17-20°C), respectively for five days prior to incubation while 21 eggs were not stored (NS-27-29°C), and out of 123 collected from OONP, 70 and 19 were stored for five days prior to incubation at (RT-21-25°C) and (RF-17-20°C), respectively while 34 eggs were (NS- 27-29°C). Prior to incubation, eggs were weighed, the height and width were measured. The process was repeated after incubation for unhatched eggs. Candling was done three days before hatching at day 29 of egg incubation. Embryo status of unhatched eggs was determined by cracking the eggs. Descriptive and inferential statistics were used to analyse the data. The NS eggs from Kainji (7.60%) and Oyo (2.01%) had the lowest percentage shrinkage in weight across the three storage systems. The order was reversed in height with RF eggs from Kainji (0.96%) and Oyo (0.46%) having lowest. The least shrinkage in width of eggs from Oyo was recorded in the RF eggs (0.00%) and in NS (0.59%) from Kainji. Eggs candling showed that presumed fertile (opaque) was highest (69.10%) in NS eggs followed by RT (45.00%). There was no significant difference (p>0.05) between the hatchability of eggs from the two parks though hatchability (7.60%) of Kainji eggs was higher than those of Oyo (7.40%). Further check on fertilization after incubation showed that RT (37.50%) eggs from Kainji were fertilized but were unable to hatch alive so also was RF eggs (21.10%). The study showed that the eggs sizes vary with ecozones while size of the eggs and storage systems affects hatchability and survival of feral helmeted guineafowl eggs in captivity. Keywords: Guineafowl; ecozones; storage systems; incubation; candling; hatchability

scholarly journals Nutrient Analysis of Grass Species Consumed by Greater One-Horned Rhinoceros (Rhinoceros Unicornis) in Chitwan National Park, Nepal

2014 ◽  
Vol 2 (4) ◽  
pp. 402-408 ◽  
Author(s):  
S. Thakur ◽  
C.R. Upreti ◽  
K. Jha
Keyword(s):  
National Park ◽  
Mean Value ◽  
Grass Species ◽  
Systematic Sampling ◽  
Slight Variation ◽  
Sample Collection ◽  
Nutrient Analysis ◽  
Mean Values ◽  
Rhinoceros Unicornis ◽  
Chitwan National Park

The Greater One-horned Rhinoceros (Rhinoceros unicornis) is found almost exclusively in Nepal and North-Eastern India. There have beenonly a few studies made on the food and the nutrient compositions of fodder species preferred by The Greater One- horned Rhinoceros. Thepresent study identifies the nutrient content of the fodder species consumed by One-horned rhinoceros which would be helpful to develop proper strategies for rhinoceros food management. For this altogether 8 grass species which were most preferred by rhinoceros were collected from Chitwan National Park. Systematic sampling was applied for sample collection and collected samples were taken to the Animal Nutrition Laboratory, Khumaltar for nutrient analysis. Among all the collected species the highest OM% was seen in Faank (93.98 ± 0.88) while Ash% and CP% was found to be highest in Eragrastic Tenella (13.67 ± 2.92) and Phragmatic karka (11.94 ± 2.26) respectively. Lowest NDF% was again seen in Eragrastic tenella (76.76 ± 2.93) and lowest ADF% and ADL% were found in Mala dubo with mean values (43.50 ± 6.86) and (6.41 ± 2.16) respectively showing high digestibility of these grasses. There were only slight variation in the EE% of the grass species withhighest mean value of (3.702 ± 1.73) of Imperata cylindrical to lowest mean value of (1.722 ± 0.11) of Eragrastic tenella. Highest energy was found in Faank (4181.90 ±1.10) and Calcium content was seen highest in Cynodon dactylon (1.30 ± 0.83).DOI: http://dx.doi.org/10.3126/ijasbt.v2i4.11119 Int J Appl Sci Biotechnol, Vol. 2(4): 402-408 

scholarly journals Characterization and Phylogeny of Fungi from Industrial Wastewater Using Highly Conserved Multiple Gene Loci

2021 ◽  
Author(s):  
Blessing Amaka Ezeonuegbu ◽  
Dauda Abdullahi Machido ◽  
Clement Z. Whong ◽  
Wisdom S. Japhet ◽  
Clement Ameh Yaro ◽  
...  
Keyword(s):  
Phylogenetic Trees ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Industrial Effluent ◽  
Pcr Amplification ◽  
Morphological Characterization ◽  
Likelihood Method ◽  
Internal Transcribed Spacer Region ◽  
Fungal Isolates ◽  
Fungal Dna Extraction

Abstract The aim of this study was isolation and molecular characterization of fungi from untreated industrial effluent by multigene phylogenetic analyses. The Fungi isolated were characterized based on PCR amplification and genomic sequencing of the internal transcribed spacer region (ITS), partial β-tubulin (Ben A), calmodulin (CaM), and DNA-directed RNA polymerase second large subunit (RPB2) genes, along with morphological characterization and species diversity. Fungal DNA extraction kits and primers sets for the selected genes were purchased and used following the manufacturer’s instructions. The obtained sequences were subjected to BLAST analysis and the corresponding fungal isolates were assigned species names after comparison with representative sequences available in GenBank. All the sequences from this study were deposited in GenBank and the accession number assigned. Phylogenetic trees of the fungal isolates were drawn for each gene by the Maximum Likelihood method using MEGA 7.0 software. Fifteen (15) Fungi species belonging to four genera of Aspergillus, Penicillium, Fusarium and Trichoderma with Aspergillus as the predominant genus were identified.

A last chance to save the northern white rhino?

Oryx ◽  
1986 ◽  
Vol 20 (1) ◽  
pp. 20-26 ◽  
Author(s):  
Kes Hillman-Smith ◽  
Mankoto ma Oyisenzoo ◽  
Fraser Smith
Keyword(s):  
National Park ◽  
Ceratotherium Simum ◽  
In Captivity ◽  
In The Wild ◽  
White Rhino

The northern subspecies of white rhinoCeratotherium simum cottoniis very close to extinction. Probably fewer than 50 remain in the wild and only 13 are known in captivity. Garamba National Park in northern Zaire contains the only potentially viable group, of 15–20 individuals, and here there is a possibility of action to save them.

scholarly journals Microbial Composition of Near-Boiling Silica-Depositing Thermal Springs throughout Yellowstone National Park

2002 ◽  
Vol 68 (10) ◽  
pp. 5123-5135 ◽  
Author(s):  
Carrine E. Blank ◽  
Sherry L. Cady ◽  
Norman R. Pace
Keyword(s):  
Yellowstone National Park ◽  
National Park ◽  
Hydrogen Oxidation ◽  
Large Subunit ◽  
Microbial Community Composition ◽  
Pcr Amplification ◽  
Small Subunit ◽  
Rrna Genes ◽  
Small Subunit Rrna ◽  
Microbial Composition

ABSTRACT The extent of hyperthermophilic microbial diversity associated with siliceous sinter (geyserite) was characterized in seven near-boiling silica-depositing springs throughout Yellowstone National Park using environmental PCR amplification of small-subunit rRNA genes (SSU rDNA), large-subunit rDNA, and the internal transcribed spacer (ITS). We found that Thermocrinis ruber, a member of the order Aquificales, is ubiquitous, an indication that primary production in these springs is driven by hydrogen oxidation. Several other lineages with no known close relatives were identified that branch among the hyperthermophilic bacteria. Although they all branch deep in the bacterial tree, the precise phylogenetic placement of many of these lineages is unresolved at this time. While some springs contained a fair amount of phylogenetic diversity, others did not. Within the same spring, communities in the subaqueous environment were not appreciably different than those in the splash zone at the edge of the pool, although a greater number of phylotypes was found along the pool's edge. Also, microbial community composition appeared to have little correlation with the type of sinter morphology. The number of cell morphotypes identified by fluorescence in situ hybridization and scanning electron microscopy was greater than the number of phylotypes in SSU clone libraries. Despite little variation in Thermocrinis ruber SSU sequences, abundant variation was found in the hypervariable ITS region. The distribution of ITS sequence types appeared to be correlated with distinct morphotypes of Thermocrinis ruber in different pools. Therefore, species- or subspecies-level divergences are present but not detectable in highly conserved SSU sequences.

scholarly journals Legionella Species Diversity in an Acidic Biofilm Community in Yellowstone National Park

2005 ◽  
Vol 71 (1) ◽  
pp. 507-511 ◽  
Author(s):  
Kathy B. Sheehan ◽  
Joan M. Henson ◽  
Michael J. Ferris
Keyword(s):  
Yellowstone National Park ◽  
National Park ◽  
Pcr Amplification ◽  
18S Rrna Gene ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Rrna Gene ◽  
Thermal Gradients ◽  
Legionella Species ◽  
Legionella Micdadei

ABSTRACT Legionella species are frequently detected in aquatic environments, but their occurrence in extreme, acidic, geothermal habitats has not been explored with cultivation-independent methods. We investigated a predominately eukaryotic algal mat community in a pH 2.7 geothermal stream in Yellowstone National Park for the presence of Legionella and potential host amoebae. Our analyses, using PCR amplification with Legionella-specific primers targeting 16S rRNA genes, detected four known Legionella species, as well as Legionella sequences from species that are not represented in sequence databases, in mat samples and cultivated isolates. The nonrandom occurrence of sequences detected at lower (30�C) and higher (35 to 38�C) temperatures suggests that natural thermal gradients in the stream influence Legionella species distributions in this mat community. We detected only one sequence, Legionella micdadei, from cultivated isolates. We cultured and sequenced partial 18S rRNA gene regions from two potential hosts, Acanthamoeba and Euglena species.

scholarly journals Competition for Light between Toxic and Nontoxic Strains of the Harmful Cyanobacterium Microcystis

2007 ◽  
Vol 73 (9) ◽  
pp. 2939-2946 ◽  
Author(s):  
W. Edwin A. Kardinaal ◽  
Linda Tonk ◽  
Ingmar Janse ◽  
Suzanne Hol ◽  
Pieter Slot ◽  
...  
Keyword(s):  
Internal Transcribed Spacer ◽  
Denaturing Gradient Gel Electrophoresis ◽  
Pcr Amplification ◽  
Internal Transcribed Spacer Region ◽  
Gradient Gel Electrophoresis ◽  
Competition For Light ◽  
Low Levels ◽  
Allelopathic Interactions ◽  
Light Absorbance ◽  
Absorbance Spectra

ABSTRACT The cyanobacterium Microcystis can produce microcystins, a family of toxins that are of major concern in water management. In several lakes, the average microcystin content per cell gradually declines from high levels at the onset of Microcystis blooms to low levels at the height of the bloom. Such seasonal dynamics might result from a succession of toxic to nontoxic strains. To investigate this hypothesis, we ran competition experiments with two toxic and two nontoxic Microcystis strains using light-limited chemostats. The population dynamics of these closely related strains were monitored by means of characteristic changes in light absorbance spectra and by PCR amplification of the rRNA internal transcribed spacer region in combination with denaturing gradient gel electrophoresis, which allowed identification and semiquantification of the competing strains. In all experiments, the toxic strains lost competition for light from nontoxic strains. As a consequence, the total microcystin concentrations in the competition experiments gradually declined. We did not find evidence for allelopathic interactions, as nontoxic strains became dominant even when toxic strains were given a major initial advantage. These findings show that, in our experiments, nontoxic strains of Microcystis were better competitors for light than toxic strains. The generality of this finding deserves further investigation with other Microcystis strains. The competitive replacement of toxic by nontoxic strains offers a plausible explanation for the gradual decrease in average toxicity per cell during the development of dense Microcystis blooms.

Dynamics of bovine intramammary infections due to coagulase-negative staphylococci on four farms

2014 ◽  
Vol 81 (2) ◽  
pp. 208-214 ◽  
Author(s):  
Ricardo Bexiga ◽  
Márcia G. Rato ◽  
Abdelhak Lemsaddek ◽  
Teresa Semedo-Lemsaddek ◽  
Carla Carneiro ◽  
...  
Keyword(s):  
Geometric Mean ◽  
Pcr Amplification ◽  
Coagulase Negative Staphylococci ◽  
Internal Transcribed Spacer Region ◽  
Time Duration ◽  
Intramammary Infections ◽  
Udder Health ◽  
Duration Of Infection ◽  
The Impact ◽  
Species Being

The objectives of this study were to compare the impact of different coagulase-negative species (CNS) on udder health measured in terms of individual quarter milk somatic cell count (SCC) and duration of intramammary infection, and to get some insight into most likely routes of infection for different CNS species. This longitudinal observational study was performed on four farms that were sampled at 4-week intervals for a total of 12 visits each. Quarters infected with CNS were followed through time with milk samples being submitted for bacteriological culture and SCC determination. PCR amplification of the internal transcribed spacer region and sequencing of the sodA and rpoB genes were used for species allocation. Pulsed-field gel electrophoresis (PFGE) was performed to assess strain identity. The percentage of quarters affected per farm varied between 6 and 35%, with the most frequently isolated CNS species being Staphylococcus epidermidis, followed by Staph. simulans, Staph. chromogenes and Staph. haemolyticus. It was possible to follow 111 intramammary infections due to CNS through time. Duration of infection had a mean of 188 d and was not significantly different between CNS species. Geometric mean quarter SCC overall was 132 000 cells/ml and was also not significantly different between CNS species. Despite the possibility of a different epidemiology of infection, the impact in terms of udder health seems to be similar for different CNS species.

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