scholarly journals COMPLEX BIOSTRATIGRAPHIC SCHEME OF THE JURASSIC DEPOSITS OF THE PIENNINE ZONE OF THE UKRAINIAN CARPATHIANS

2021 ◽  
pp. 48-73
Author(s):  
N.M. Zhabina
Keyword(s):  
Its Region ◽  
Upper Jurassic ◽  
Published Data ◽  
Stratigraphic Sequence ◽  
International Scale ◽  
Upper Bajocian ◽  
First Time

The article summarizes the results of the study of paleontology and biostratigraphy of the Jurassic of the Piennine Zone of the Ukrainian Carpathians by domestic and foreign researchers. For the first time, a summary paleontological description of these sediments is presented, taking into account numerous published data on identified macro- and mictofossils. A correlation biozonal scale has been created, as well as complex biostratigraphic schemes for each Jurassic series of its region in accordance with the International Stratigraphic Scale (2020). Because the stratigraphic sequence was disturbed by disjunctive dislocations, these schemes were developed by analysis of fragmentary sections. At present, three series of the Jurassic are determined by ammonites, belemnites, pelecypods, brachiopods, the Lower and Upper series are also dated by dinocysts, the Upper also by foraminifera and tintinnids. The stages and standard zones of the modern international scale are determined by ammonites: Liasicus of the Gettangian; Bucklandi, Obtusum, Raricostatum of the Sinemurian; Jamesoni, Emaciatum of the Pliensbachian; Tenuicostatum, Serpentinum, Bifrons, Thouarcense of the Toarcien; Opalinum, Murchisonae, Bradfordensis, Concavum of the Aalenian; Propinquans, Humpriesianum, Parkinsoni of the Bajocian; Zigzag, Aurigerus, Subcontractus, Bremeri, Retrocostatum of the Bathonian; Athletа of the Callovian; Plicatilis і Bifurcates of the Oxfordian; Divisum, Acanticum і Cavouri of the Kimmeridgian. Continuous dinocyst zonation is traced in the Upper Jurassic – Fibrata Аcme (Upper Oxfordian), Parvula Acme, Moluccana і Borzai (Kimmerigian), Pulla, Tithonica, Malmica, Semiradiata (Lower Tithonian) and all standard tintinnide zones of Tithonian — Chitinoidella (підзони Dobeni і Boneti), Praetintinnopsella, Crassicollaria. The boundaries of the stages from the Gettangiean to the Oxfordian are not determined. The boundaries between the Lower and Upper Oxfordian as well as between the Kimmeridgian substages are determined by ammonites as well as the boundary between the Kimmeridgian and Tithonian is determined by dinocysts, and the boundary between the Jurassic and Cretaceous is determined by tintinnids (corresponds to the boundary between the zones Crassicollaria of Tithonian and Calpionella of Berriassian). Stratigraphic unconformities were revealed by the macro- and mictofossils: the regional erosion on the boundary between the Aalenian and Bajocian as well as in Early Callovian, and short gap on the boundary between the Lower and Upper Bajocian. 

Acanthocnemidae (Coleoptera), a family of beetles new to Russia

2011 ◽  
Vol 20 (1) ◽  
pp. 71-73 ◽  
Author(s):  
Ya.N. Kovalenko
Keyword(s):  
Time Distribution ◽  
Published Data ◽  
First Time

Acanthocnemus nigricans (Hope, 1843), a single recent representative of the beetle family Acanthocnemidae, is reported from Russia for the first time. Distribution, probable ways of dispersion and the published data on the biology of A. nigricans are discussed.

scholarly journals Programme for Harmonization to the International Scale in Latin America for BCR-ABL1 quantification in CML patients: findings and recommendations

2020 ◽  
Vol 58 (12) ◽  
pp. 2025-2035
Author(s):  
María Sol Ruiz ◽  
María Belén Sánchez ◽  
Yuly Masiel Vera Contreras ◽  
Evangelina Agrielo ◽  
Marta Alonso ◽  
...  
Keyword(s):  
Latin America ◽  
Myeloid Leukemia ◽  
World Health ◽  
Molecular Response ◽  
Limit Of Quantification ◽  
International Scale ◽  
Deep Molecular Response ◽  
Health Organization ◽  
First Time

AbstractObjectivesThe quantitation of BCR-ABL1 mRNA is mandatory for chronic myeloid leukemia (CML) patients, and RT-qPCR is the most extensively used method in testing laboratories worldwide. Nevertheless, substantial variation in RT-qPCR results makes inter-laboratory comparability hard. To facilitate inter-laboratory comparative assessment, an international scale (IS) for BCR-ABL1 was proposed.MethodsThe laboratory-specific conversion factor (CF) to the IS can be derived from the World Health Organization (WHO) genetic reference panel; however, this material is limited to the manufacturers to produce and calibrate secondary reference reagents. Therefore, we developed secondary reference calibrators, as lyophilized cellular material, aligned to the IS. Our purpose was both to re-evaluate the CF in 18 previously harmonized laboratories and to propagate the IS to new laboratories.ResultsOur field trial including 30 laboratories across Latin America showed that, after correction of raw BCR-ABL1/ABL1 ratios using CF, the relative mean bias was significantly reduced. We also performed a follow-up of participating laboratories by annually revalidating the process; our results support the need for continuous revalidation of CFs. All participating laboratories also received a calibrator to determine the limit of quantification (LOQ); 90% of them could reproducibly detect BCR-ABL1, indicating that these laboratories can report a consistent deep molecular response. In addition, aiming to investigate the variability of BCR-ABL1 measurements across different RNA inputs, we calculated PCR efficiency for each individual assay by using different amounts of RNA.ConclusionsIn conclusion, for the first time in Latin America, we have successfully organized a harmonization platform for BCR-ABL1 measurement that could be of immediate clinical benefit for monitoring the molecular response of patients in low-resource regions.

Towards a monophyletic classification of Lejeuneaceae III: the systematic position of Leiolejeunea

Phytotaxa ◽  
2014 ◽  
Vol 170 (3) ◽  
pp. 187 ◽  
Author(s):  
ALFONS SCHÄFER-VERWIMP ◽  
KATHRIN FELDBERG ◽  
SHANSHAN DONG ◽  
HUUB VAN MELICK ◽  
DENILSON F. PERALTA ◽  
...  
Keyword(s):  
Bayesian Inference ◽  
Maximum Likelihood ◽  
Dna Sequences ◽  
Its Region ◽  
Systematic Position ◽  
Leaf Cell ◽  
Oil Bodies ◽  
Sister Relationship ◽  
First Time

The derived liverwort Leiolejeunea grandiflora was recollected at the type locality in Jamaica after more than 100 years. The characteristics of its oil bodies were described for the first time based on the new collections. Each leaf cell possesses 2-4(-6) rather small, subhomogeneous to very finely segmented, subglobose to ellipsoidal, colorless oil bodies. The plants were either dioicous or autoicous. DNA sequences of two chloroplast regions (trnL-trnF, rbcL) and the nuclear ribosomal ITS region were obtained for two accessions of Leiolejeunea to enable the inference of the phylogenetic relationships of these plants. Based on Bayesian inference of phylogeny as well as maximum parsimony and maximum likelihood analyses of a dataset including 87 representatives of Lejeuneaceae, Leiolejeunea was found as the putative sister to either Echinolejeuneinae or Cheilolejeuneinae. Thus, we propose the new monogeneric subtribe Leiolejeuneinae with relationships to Cheilolejeuneinae and Echinolejeuneinae. The analyses included also one accession of the generitype of Cheilolejeunea, C. decidua [= Cheilolejeunea adnata]. This species was found in a well supported sister relationship with Cystolejeunea. To avoid nomenclatural confusion, we propose a wide genus concept for Cheilolejeunea including Aureolejeunea, Cyrtolejeunea, Cystolejeunea, Evansiolejeunea, Leucolejeunea, and Omphalanthus.

scholarly journals Three new Russula species in sect. Ingratae (Russulales, Basidiomycota) from southern China

MycoKeys ◽  
2021 ◽  
Vol 84 ◽  
pp. 103-139
Author(s):  
Guo-Jie Li ◽  
Shou-Mian Li ◽  
Bart Buyck ◽  
Shi-Yi Zhao ◽  
Xue-Jiao Xie ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Internal Transcribed Spacer ◽  
Southern China ◽  
Its Region ◽  
Line Drawings ◽  
Phylogenetic Data ◽  
Three New Species ◽  
First Time

Three new species of Russulasection Ingratae, found in Guizhou and Jiangsu Provinces, southern China, are proposed: R. straminella, R. subpectinatoides and R. succinea. Photographs, line drawings and detailed morphological descriptions for these species are provided with comparisons against closely-related taxa. Phylogenetic analysis of the internal transcribed spacer (ITS) region supported the recognition of these specimens as new species. Additionally, R. indocatillus is reported for the first time from China and morphological and phylogenetic data are provided for the Chinese specimens.

scholarly journals Amanita subjunquillea and its ectomycorrhizal association, reported as new for Pakistan

Mycotaxon ◽  
2019 ◽  
Vol 134 (3) ◽  
pp. 413-423
Author(s):  
Muhammad Ishaq ◽  
Arooj Naseer ◽  
Munazza Kiran ◽  
Muhammad Fiaz ◽  
Abdul Nasir Khalid
Keyword(s):  
Its Region ◽  
Morphological Characters ◽  
Molecular Data ◽  
Sequence Analyses ◽  
Dark Orange ◽  
Ectomycorrhizal Roots ◽  
Morphological And Molecular Data ◽  
Quercus Floribunda ◽  
First Time ◽  
Ectomycorrhizal Association

Amanita subjunquillea and its ectomycorrhizal association are reported for the first time from moist temperate Himalayan forests of Pakistan. The sample was studied based on morphological characters and nucleotide sequence analyses of the ITS region generated from basidiomata and ectomycorrhizal roots of Quercus floribunda. Our collection differs from the type in its dark orange pileus disc and pale yellow margins. Remaining morphological and molecular data are consistent with previously reported specimens. This represents the first report of A. subjunquillea from Pakistan.

Molecular identification of cyst-forming nematodes (Heteroderidae) from Iran and a phylogeny based on ITS-rDNA sequences

Nematology ◽  
2003 ◽  
Vol 5 (1) ◽  
pp. 99-111 ◽  
Author(s):  
Zahra Tanha Maafi ◽  
Sergei Subbotin ◽  
Maurice Moens
Keyword(s):  
Phylogenetic Analyses ◽  
Species Level ◽  
Its Rdna ◽  
Heterodera Avenae ◽  
Published Data ◽  
Rdna Sequences ◽  
First Time ◽  
Group Species ◽  
High Support ◽  
Different Parts

Abstract RFLP and sequences of ITS-rDNA of 45 populations of cyst-forming nematodes collected from different parts of Iran were analysed and identified as representatives of 21 species. Eight enzymes generated RFLP for all studied populations. Comparison of RFLP profiles and sequences of the ITS regions with published data confirmed the presence of Heterodera avenae, H. filipjevi, H. glycines, H. hordecalis, H. latipons, H. schachtii and H. trifolii in Iran. RFLP patterns and ITS sequences for H. elachista, H. turcomanica, H. mothi and C. cacti were obtained for the first time in this study. Heterodera humuli, H. goettingiana, H. fici, H. elachista, H. turcomanica and Cactodera cacti are recorded for the first time in Iran. These results correspond with morphological and morphometric identification of the populations. Several populations were not identified at the species level and are attributed to Heterodera sp.; some of these may correspond to new species. Twenty-one new sequences from Iranian cyst-forming nematodes and 36 known sequences were used for the phylogenetic analyses. The cyst-forming nematodes formed several clades corresponding to their morphological features. Heterodera mothi and H. elachista clustered with high support with other Cyperi group species and H. turcomanica formed a moderately to highly supported clade with the Humuli group.

scholarly journals Completely preserved cockroaches of the family Mesoblattinidae from the Upper Jurassic-Lower Cretaceous Yixian Formation (Liaoning Province, NE China)

2013 ◽  
Vol 64 (4) ◽  
pp. 291-304 ◽  
Author(s):  
Dandan Wei ◽  
Dong Ren
Keyword(s):  
Lower Cretaceous ◽  
Hind Wing ◽  
Upper Jurassic ◽  
Morphological Characters ◽  
Yixian Formation ◽  
Liaoning Province ◽  
Tergal Glands ◽  
The Family ◽  
Left And Right ◽  
First Time

Abstract Although cockroaches were the dominant insects in various Paleozoic and Mesozoic insect assemblages, their general morphology was extremely conservative. One of the most common of them, the Jurassic-Cretaceous family Mesoblattinidae, is described here for the first time on the basis of completely preserved specimens. Ninety-two specimens of Perlucipecta aurea gen. et sp. n. reveal details of head, mandible, male tergal glands and terminal hook; cercal, leg and antennal sensilla. Its congener, P. vrsanskyi is described from the same sediments of the Yixian Formation (Upper Jurassic-Lower Cretaceous). The forewing venation variability of P. aurea, analysed for the first time in this family is nearly identical (CV = 6.23 %) with variability of two species of family Blattulidae that occur at the same locality (CV = 6.22 %; 5.72 %). The transitional nature of morphological characters represented by asymmetry between left and right wings (simple/branched forewing SC and hind wing M) in P. aurea documents the phylogenetic relation between the families Mesoblattinidae and Ectobiidae

Characterization and pathogenicity of Diplodia, Lasiodiplodia and Neofusicoccum species causing Botryosphaeria canker and dieback of apple trees in central Chile

Plant Disease ◽  
2021 ◽  
Author(s):  
Gonzalo A. Díaz ◽  
Adrián Vinicio Valdez ◽  
Francois Halleen ◽  
Enrique Ferrada ◽  
Mauricio A. Lolas ◽  
...  
Keyword(s):  
Disease Incidence ◽  
Elongation Factor ◽  
Its Region ◽  
Morphological Identification ◽  
Apple Trees ◽  
Translation Elongation ◽  
Central Chile ◽  
Growing Seasons ◽  
First Time ◽  
Elongation Factor 1

In recent years, the number of apple trees affected by Botryosphaeria cankers and dieback has considerably increased in central Chile. This study aimed to identify the species of Botryosphaeriaceae associated with canker and dieback symptoms, estimate disease incidence and distributions, and study their pathogenicity and virulence on apple and other fruit crops. A field survey of 34 commercial orchards of apple (7-to 30-year-old) was conducted in 16 localities obtaining 270 symptomatic branches and trunks samples in 2017 and 2018 growing seasons. The incidence of Botryosphaeria canker and dieback ranged between 5 and 40%, and a total of 255 isolates of Botryosphaeriaceae spp. were obtained from 238 cankers. Morphological identification along with phylogenetics studies of the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of the rDNA, part of the translation elongation factor 1-α (tef1-α), and part of the beta tubulin (tub2) genes allowed to identify Diplodia mutila (n = 49 isolates), D. seriata (n = 136 isolates), Lasiodiplodia theobromae (n = 16 isolates) and Neofusicoccum arbuti (n= 54 isolates). L. theobromae was isolated mainly of apple dieback from northern localities. All pathogens tested were pathogenic, causing canker and dieback symptoms on lignified twigs of apple, pear, walnut, and green grapevine shoots in the field. Isolates of N. arbuti were the most virulent by reproducing more severe cankers on lignified tissues inoculated. This study reports D. mutila and L. theobromae for the first time associated with Botryosphaeria canker and dieback in Chile, and it is the first description of N. arbuti causing apple dieback worldwide.

scholarly journals Insect galls on Myrtaceae: richness and distribution in brazilian restingas

2018 ◽  
Vol 19 (1) ◽  
Author(s):  
Valéria Cid Maia
Keyword(s):  
Host Plant ◽  
Rio De Janeiro ◽  
Single Species ◽  
The State ◽  
Published Data ◽  
Associated Fauna ◽  
Insect Galls ◽  
Insect Gall ◽  
First Time ◽  
Internal Chamber

Abstract: Inventories in Brazilian restingas have been indicating that Myrtaceae are the plant family with the greatest richness of insect galls. A compilation of published data plus new records was elaborated with the aim of stablishing the number of gall morphotypes on this family in this physiognomy of the Atlantic Forest, producing a list of galled species, pointing out the predominant gall features, evaluating the taxonomical knowledge of the gallers, listing the associated fauna, and based on host plant endemisms and monophagy proposing the endemism of some galling species. Myrtaceae harbor 111 morphotypes of insect gall (about 75% induced by Cecidomyiidae, Diptera) on 25 host plant species, 15 endemic. Eugenia L. highlights as the plant genus with the highest number of galled species and gall richness. Leaves are the most galled organ. There is a predominance of globoid and fusiform shapes, green color, glabrous surface and a single internal chamber. The taxonomical data on gallers is deficient as many records have been presented at supraspecific levels. The associated fauna is rich and includes parasitoids, inquilines and predators. Twelve species of Cecidomyiidae, a single species of Curculionidae (Coleoptera) and one species of Eriococcidae (Hemiptera) have been associated exclusively with endemic hosts and then are proposed in the present study as endemic too. The geographical distribution of many galls and respective gallers are restricted to the State of Rio de Janeiro, where most inventories have been carried out. For the first time, Eugeniamyia dispar, previously known from a rural area of Rio Grande do Sul and restinga areas of São Paulo, is recorded in the State of Rio de Janeiro.

scholarly journals Compositional cyber-physical epidemiology of COVID-19

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Jin Woo Ro ◽  
Nathan Allen ◽  
Weiwei Ai ◽  
Debi Prasad ◽  
Partha S. Roop
Keyword(s):  
New Zealand ◽  
Government Policy ◽  
Cyber Physical Systems ◽  
Published Data ◽  
Disease Dynamics ◽  
Physical Systems ◽  
The Government ◽  
The Impact ◽  
First Time ◽  
New Framework

Abstract The COVID-19 pandemic has posed significant challenges globally. Countries have adopted different strategies with varying degrees of success. Epidemiologists are studying the impact of government actions using scenario analysis. However, the interactions between the government policy and the disease dynamics are not formally captured. We, for the first time, formally study the interaction between the disease dynamics, which is modelled as a physical process, and the government policy, which is modelled as the adjoining controller. Our approach enables compositionality, where either the plant or the controller could be replaced by an alternative model. Our work is inspired by the engineering approach for the design of Cyber-Physical Systems. Consequently, we term the new framework Compositional Cyber-Physical Epidemiology. We created different classes of controllers and applied these to control the disease in New Zealand and Italy. Our controllers closely follow government decisions based on their published data. We not only reproduce the pandemic progression faithfully in New Zealand and Italy but also show the tradeoffs produced by differing control actions.

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