New combination and new location Gagea reticulata var. robusta comb. et stat. nov. (Liliaceae)

2017 ◽  
Vol 48 ◽  
pp. 58-64
Author(s):  
L. S. Krasovskaya
Keyword(s):  
Morphological Data ◽  
New Combination ◽  
Phylogenetic Study ◽  
Molecular Phylogenetic Study ◽  
The Status ◽  
New Localities ◽  
Molecular Phylogenetic ◽  
New Location

The status of Gagea robusta Zarrei et Wilkin is revised and a new combination, G. reticulata var. robusta (Zarrei et Wilkin) Krassovsk. comb. et stat. nov., is published in accordance with morphological data. Previously, this taxon was involved in the molecular phylogenetic study of the genus Gagea under the designation «G. helicophylla Levichev» (ined.). The new localities of G. reticulata var. robusta in Turkmenia (Badkhyz, Kopetdag) and Iran are cited.

Phylogeography and morphological variation of the northernmost distributed species of the Liolaemus lineomaculatus section (Liolaemini) from Patagonia

2015 ◽  
Vol 36 (4) ◽  
pp. 373-387 ◽  
Author(s):  
María Florencia Breitman ◽  
Ramiro Jesús Neyro Martinez ◽  
Luciano Javier Avila ◽  
Jack Walter Sites ◽  
Mariana Morando
Keyword(s):  
Phylogenetic Study ◽  
Limited Sample ◽  
Published Evidence ◽  
Molecular Phylogenetic Study ◽  
Candidate Species ◽  
The Status ◽  
Molecular Phylogenetic ◽  
Almost All ◽  
Eleven Species

Lizards from the Liolaemus lineomaculatus section are endemic to Patagonia, southern South America. Three main groups are recognized within this section, one of which, the L. kingii group includes eleven species. The two northernmost distributed species of this group, L. somuncurae and L. uptoni, are endemic to a small area that partly overlaps with the Provincial Protected Area Somuncurá Plateau (within the Somuncurá massif). Knowledge available for these species is based on limited sample sizes, and mostly limited to their original descriptions; also a recent molecular phylogenetic study showed evidence for a closely related candidate species (Liolaemus sp. 4). In this paper we morphologically and genetically characterize the species L. somuncurae, L. uptoni, and L. sp. 4, and present past demographic hypotheses. We studied eighty lizards, and collected morphological and genetic data for almost all of them. The specific status of L. somuncurae and L. uptoni is supported by molecular, morphological, and distributional evidence, as well as the status of L. sp. 4; for which we recommend further morphological comparisons with other species of the L. kingii group. We also identified two novel lineages from restricted areas south of the Chubut River that we propose as candidate species. We extend previously published evidence (from plants and rodents) supporting the role of the Chubut River as an allopatric barrier. Also, in agreement with previous results based on plants, we found evidence for two refugia in northwestern Chubut, for which we encourage conservation efforts.

scholarly journals Herzog Vindicated: Integrative Taxonomy Reveals that Trichostomum brachydontium (Pottiaceae, Bryophyta) Comprises Several Species

2021 ◽  
Author(s):  
Rosa M. Ros ◽  
Olaf Werner ◽  
Ron D. Porley
Keyword(s):  
Incomplete Lineage Sorting ◽  
Phylogenetic Analyses ◽  
Integrative Taxonomy ◽  
Morphological Data ◽  
Phylogenetic Study ◽  
Lineage Sorting ◽  
New Name ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Phylogenetic Lineages

The morphologically variable moss Trichostomum brachydontium is very common in south and west Europe, particularly under Mediterranean and Atlantic climates. A morphological study was conducted alongside a molecular phylogenetic study based on nr ITS and cp rbcL regions in order to assess if T. brachydontium is an exceptionally polymorphic species as evidenced by the number of described infraspecific taxa from the last century or, alternatively, if it includes more than one species, and if so, to find the valid name for them. Phylogenetic analyses of both nuclear and chloroplast datasets show that there are four well-supported clades. While the ITS based tree is in good agreement with the morphological data, there are a few inconsistencies with reference to the rbcL tree; this may be explained by incomplete lineage sorting or by hybridization. The morphological survey revealed well-defined discriminate differences between the four phylogenetic lineages. The taxonomic conclusions include the recognition of four species: T. brachydontium s.s., T. herzogii (a new name proposed for var. cuspidatum), T. littorale and T. meridionale (a new name proposed for var. densum). Lectotypes are designated for T. brachydontium and T. littorale. Our results underline the ongoing need of integrative studies to examine further the underestimated diversity of the T. brachydontium complex in other regions.

Reestablishment of Mansoa ventricosa (Bignonieae, Bignoniaceae) based on molecular and morphological data

Phytotaxa ◽  
2017 ◽  
Vol 327 (2) ◽  
pp. 141 ◽  
Author(s):  
JESSICA NAYARA CARVALHO FRANCISCO ◽  
LÚCIA G. LOHMANN
Keyword(s):  
The State ◽  
Morphological Data ◽  
Phylogenetic Study ◽  
Phylogenetic Placement ◽  
Morphological Studies ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Wet Forests ◽  
New Distribution ◽  
Broad Scale

Pachyptera ventricosa is a rare and poorly known species of liana that occurs in wet forests from the state of Pará, in Brazil. This species is characterized by features that are diagnostic of four genera within tribe Bignonieae: Mansoa, Martinella, Pachyptera, and Tanaecium. The currently recognized P. ventricosa was originally described in Mansoa, but subsequently transferred to Pachyptera based on morphological similarities. In this study, we use a combination of molecular and morphological data to evaluate the current placement of P. ventricosa. We conduct a broad scale molecular phylogenetic study based on 114 sequences of ndhF and PepC representing 112 taxa and members of all genera recognized in Bignonieae. In addition, we also conduct detailed morphological studies of selected characters. Our molecular phylogenetic study indicates that the currently recognized Pachyptera ventricosa is more closely related to members of Mansoa than to Pachyptera. New morphological data corroborates the molecular phylogenetic placement indicating that this species is indeed best placed within Mansoa. We here propose the reestablishment of Mansoa ventricosa, and show the detailed description for this species, along with new distribution information, and the first illustration for this taxon.

A morphology-based phylogenetic analysis of Fasciolariidae (Gastropoda: Buccinoidea)

Zootaxa ◽  
2019 ◽  
Vol 4684 (1) ◽  
pp. 1-65
Author(s):  
DIOGO R. COUTO ◽  
LUIZ R. L. R. SIMONE
Keyword(s):  
Morphological Data ◽  
Phylogenetic Study ◽  
Similar Species ◽  
Molecular Phylogenetic Study ◽  
The Family ◽  
Basal Clade ◽  
Morphological Approach ◽  
Molecular Phylogenetic ◽  
Taxonomic Groups ◽  
The Tropics

Fasciolariids are buccinoid neogastropods and key predators in the tropics and subtropics, comprising more than 500 species in the subfamilies Fasciolariinae, Fusininae and Peristerniinae. Tulip shells, horse-conchs, spindles, etc., have been grouped into heterogeneous combinations of unrelated species, while several generic names have been used to group conchologically similar species. The latest molecular phylogenetic study conflicts with the current circumscription of many genera, and even more so, with the three currently recognized subfamilies. This work is the first morphological approach to the phylogeny of fasciolariids, using a parsimony analysis in TnT of 53 taxa based on 100 characters. This analysis reveals a monophyletic Fasciolariidae, with the genera Dolicholatirus and Teralatirus representing the most basal clade in the family, followed by three nodes that correspond to a fusinine grade, which includes the genus Pseudolatirus (Peristerniinae). A terminal clade groups the peristerniine genera Peristernia and Fusolatirus, fasciolariines and the remaining peristerniines. Although none of these clades correspond to currently accepted taxonomic groups, the latter two clades are corroborated in the most recent multilocus molecular phylogeny. This study supports the utility of morphological data in the recovery of groups, even in the molecular era. 

Phylogenetic position and taxonomic assignment of Thlaspi aghricum P.H.Davis & K.Tan (Brassicaceae)

Phytotaxa ◽  
2014 ◽  
Vol 178 (4) ◽  
pp. 287
Author(s):  
Mehmet Fırat ◽  
Barış Özüdoğru ◽  
Burcu Tarıkahya Hacıoğlu ◽  
Ali Savaş Bülbül ◽  
Ihsan Ali Al-Shehbaz ◽  
...  
Keyword(s):  
Taxonomic Status ◽  
Molecular Data ◽  
New Combination ◽  
Phylogenetic Position ◽  
Phylogenetic Study ◽  
Taxonomic Assignment ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Morphological And Molecular Data ◽  
Seed Coat Morphology

A general review of the taxonomic status of Thlaspi past and present is given, and a critical evaluations of its segregates based on both morphological and molecular data are  presented. ITS molecular phylogenetic study of Thlaspi aghricum and related species, as well as seed-coat morphology and anatomy strongly support the placement of the species in Noccaea. The new combination N. aghrica is proposed, and detailed description and distribution of the species are given.

CIRCUMSCRIPTION AND PHYLOGENETIC RELATIONSHIPS OF GYMNOCARPOS (CARYOPHYLLACEAE-PARONYCHIOIDEAE)

2002 ◽  
Vol 59 (2) ◽  
pp. 221-237 ◽  
Author(s):  
B. OXELMAN ◽  
B. AHLGREN ◽  
M. THULIN
Keyword(s):  
Phylogenetic Relationships ◽  
Internal Transcribed Spacer ◽  
Sister Group ◽  
Morphological Characters ◽  
Phylogenetic Study ◽  
Molecular Phylogenetic Study ◽  
The Status ◽  
Molecular Phylogenetic ◽  
Internal Transcribed Spacer Sequences

A molecular phylogenetic study based on nuclear ribosomal internal transcribed spacer sequences and plastid rps16 intron sequences on the status of the genus Gymnocarpos (Paronychioideae, Caryophyllaceae) is presented. Gymnocarpos decandrus and Sclerocephalus arabicus form a strongly supported clade within a well-supported group consisting also of G. przewalskii, and the rest of Gymnocarpos. Re-examination of morphological characters also supports this conclusion. Paronychia is found to be polyphyletic, with the subgenera Paronychia and Siphonychia forming a strongly supported sister group to Gymnocarpos, whereas P. kapela and P. chlorothyrsa (representing subgen. Anoplonychia) are found to be related to Herniaria and Philippiella. A key to the 10 species recognized in Gymnocarpos is presented, as well as synoptical information on nomenclature and distributions.

Description of Ditylenchus acantholimonis n. sp. (Rhabditida: Anguinidae) from Iran, a morphological and molecular phylogenetic study

Nematology ◽  
2021 ◽  
pp. 1-10
Author(s):  
Samira Aliverdi ◽  
Ebrahim Pourjam ◽  
Majid Pedram
Keyword(s):  
New Species ◽  
Rhizosphere Soil ◽  
Phylogenetic Analyses ◽  
Phylogenetic Study ◽  
Pharyngeal Bulb ◽  
Lateral Field ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Golestan Province ◽  
Tail Tip

Summary Ditylenchus acantholimonis n. sp. is described based on morphological, morphometric and molecular characters. It was isolated from the rhizosphere soil of Acantholimon sp. in Golestan province, Iran, and is mainly characterised by having four lines in the lateral field, a pyriform to bottle-shaped offset pharyngeal bulb, post-vulval uterine sac 36.6-56.1% of the vulva to anus distance long, and a subcylindrical to conical tail with widely rounded tip. It is further characterised by short to medium-sized females, 480-617 μm long, with a fine stylet having small rounded knobs, V = 80.8-83.6, c = 11.0-13.8, c′ = 3.3-4.6, and males with 16.0-17.0 μm long spicules. The new species was morphologically compared with six species having four lines in their lateral field, rounded tail tip and comparable morphometric data namely: D. dipsacoideus, D. emus, D. exilis, D. paraparvus, D. sturhani, and D. solani. It was also compared with two species, D. ferepolitor and D. angustus, forming a maximally supported clade in the 18S tree. The phylogenetic analyses using the maximal number of Anguinidae and several Sphaerularioidea genera based upon partial 18S and 28S rDNA D2-D3 sequences revealed that Ditylenchus is polyphyletic. In the 18S tree, the new species formed a clade with D. ferepolitor (KJ636374) and D. angustus (AJ966483); in the 28S tree it formed a poorly supported clade with D. phyllobios (KT192618) and Ditylenchus sp. (MG865719).

scholarly journals A molecular phylogenetic study of the caecal fluke of poultry, Postharmostomum commutatum (= P. gallinum) (Trematoda: Brachylaimidae)

2018 ◽  
Vol 117 (12) ◽  
pp. 3927-3934 ◽  
Author(s):  
Marisa C. Valadão ◽  
Beatriz C. M. Silva ◽  
Danimar López-Hernández ◽  
Jackson V. Araújo ◽  
Sean A. Locke ◽  
...  
Keyword(s):  
Phylogenetic Study ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic

Molecular phylogeny of Pemphiginae (Hemiptera: Aphididae) inferred from nuclear gene EF-1α sequences

2008 ◽  
Vol 98 (5) ◽  
pp. 499-507 ◽  
Author(s):  
H.C. Zhang ◽  
G.X. Qiao
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Phylogeny ◽  
Host Specificity ◽  
Nuclear Gene ◽  
Molecular Data ◽  
Molecular Phylogenetic Analysis ◽  
Phylogenetic Study ◽  
Primary Host ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic

AbstractThree traditional tribes of Fordini, Pemphigini and Eriosomatini comprise Pemphiginae, and there are two subtribes in Fordini and Pemphigini, respectively. Most of the species in this subfamily live heteroecious holocyclic lives with distinct primary host specificity. The three tribes of Pemphigini (except Prociphilina), Eriosomatini and Fordini use three families of plants, Salicaceae (Populus), Ulmaceae (Ulums) and Anacardiaceae (Pistacia and Rhus), as primary hosts, respectively, and form galls on them. Therefore, the Pemphigids are well known as gall makers, and their galls can be divided into true galls and pseudo-galls in type. We performed the first molecular phylogenetic study of Pemphiginae based on molecular data (EF-1α sequences). Results show that Pemphiginae is probably not a monophylum, but the monophyly of Fordini is supported robustly. The monophyly of Pemphigini is not supported, and two subtribes in it, Pemphigina and Prociphilina, are suggested to be raised to tribal level, equal with Fordini and Eriosomatini. The molecular phylogenetic analysis does not show definite relationships among the four tribes of Pemphiginae, as in the previous phylogenetic study based on morphology. It seems that the four tribes radiated at nearly the same time and then evolved independently. Based on this, we can speculate that galls originated independently four times in the four tribes, and there is no evidence to support that true galls are preceded by pseudo-galls, as in the case of thrips and willow sawflies.

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