scholarly journals Corrigendum: Assessing the function of STAS domain protein SypA in Vibrio fischeri using a comparative analysis

2017 ◽  
Vol 8 ◽  
Author(s):  
Cecilia M. Thompson
Author(s):  
Brian E. Moy ◽  
J. Seshu

Sulfate Transport Anti-Sigma antagonist domains (Pfam01740) are found in all branches of life, from eubacteria to mammals, as a conserved fold encoded by highly divergent amino acid sequences. These domains are present as part of larger SLC26/SulP anion transporters, where the STAS domain is associated with transmembrane anchoring of the larger multidomain protein. Here, we focus on STAS Domain only Proteins (SDoPs) in eubacteria, initially described as part of the Bacillus subtilisRegulation of Sigma B (RSB) regulatory system. Since their description in B. subtilis, SDoPs have been described to be involved in the regulation of sigma factors, through partner-switching mechanisms in various bacteria such as: Mycobacterium. tuberculosis, Listeria. monocytogenes, Vibrio. fischeri, Bordetella bronchiseptica, among others. In addition to playing a canonical role in partner-switching with an anti-sigma factor to affect the availability of a sigma factor, several eubacterial SDoPs show additional regulatory roles compared to the original RSB system of B. subtilis. This is of great interest as these proteins are highly conserved, and often involved in altering gene expression in response to changes in environmental conditions. For many of the bacteria we will examine in this review, the ability to sense environmental changes and alter gene expression accordingly is critical for survival and colonization of susceptible hosts.


Author(s):  
K. N. Demchenko ◽  
A. S. Kiryushkin ◽  
E. L. Ilina ◽  
E. D. Guseva

In order to understand the relationship between genetic programs for the development of different types of lateral roots and symbiotic nodules, a comparative analysis of promoter activity of LOB-DOMAIN PROTEIN family genes was carried out.


BMC Genomics ◽  
2009 ◽  
Vol 10 (1) ◽  
pp. 510 ◽  
Author(s):  
Marco Vedovato ◽  
Valeria Rossi ◽  
Joel B Dacks ◽  
Francesco Filippini

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