scholarly journals A Multidisciplinary Fingerprinting Approach for Authenticity and Geographical Traceability of Portuguese Wines

Foods ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 1044
Author(s):  
Rui J. S. Teixeira ◽  
Sónia Gomes ◽  
Vitorino Malheiro ◽  
Leonor Pereira ◽  
José R. Fernandes ◽  
...  
Keyword(s):  
Clay Content ◽  
Two Dimensions ◽  
Added Value ◽  
Genetic Identification ◽  
Isotopic Ratios ◽  
Nucleotide Polymorphisms ◽  
Single Nucleotide ◽  
Isotopic Signatures ◽  
Anthocyanin Pathway ◽  
Varietal Identification

The interest in developing reliable wine authenticity schemes is a hot-topic, especially for wines with recognized added-value. In order to accomplish this goal, two dimensions need to be considered: the grapevine variety determination and the geographical provenance. The aim of this study was to develop a multidisciplinary approach applicable to wines from the sub region Melgaço and Monção of the demarcated Vinho Verde region and from the demarcated Douro region. The proposed scheme consists on the use of DNA-based assays to detect Single Nucleotide Polymorphisms (SNPs) on three genes of the anthocyanin pathway (UFGT, F3H and LDOX) coupled with High-resolution melting (HRM) analysis aiming the varietal identification. The Alvarinho wines revealed to have the same haplotype using this marker set, demonstrating its applicability for genetic identification. In addition, to assess their geographical provenance, a multi-elemental approach using Sr and Pb isotopic ratios of wine, soil and bedrock samples was used. The isotopic data suggest a relation between Sr and Pb uptake by vine roots and soil’s texture and clay content, rather than with the whole rock’s isotopic ratios, but also highlights the potential of a discriminating method based on the combination of selected isotopic signatures.

scholarly journals Genetic Identification: A Review on Autosomal Single Nucleotide Polymorphism’s as Diagnostic Tool for Identifying Human

2021 ◽  
pp. 25-33
Author(s):  
Fahmida Kahtoon ◽  
Ruba Mustafa Elsaid Ahmed ◽  
Naveed Iqbal ◽  
Zahid Balouch ◽  
Fahad Saleh Alenazi
Keyword(s):  
Forensic Science ◽  
Molecular Genetics ◽  
Crime Scene ◽  
The Body ◽  
Genetic Identification ◽  
Forensic Sciences ◽  
Nucleotide Polymorphisms ◽  
Human Beings ◽  
Autosomal Snps ◽  
Single Nucleotide

Single Nucleotide polymorphisms are biological markers, helping researchers  to locate genes that are associated with various  diseases. When SNPs occur within a gene or in a regulatory region near a gene, they may play a more direct role in disease by affecting the gene's function. Most SNPs have no effect on health or development.Advancement in the field of genetics has resulted in the application of several techniques of molecular genetics in Pharmacogenomics. Nucleotide Polymorphisms (SNPs) holds the key in defining the risk of an individual’s susceptibility to various illnesses and response to drugs The body of human beings is composed of DNA which is a chemical molecule responsible for imparting phenotypic and genotypic characteristics to the individuals. The most recent advancement of molecular genetics, which has found application in forensic science, is the use of autosomal SNPs because they can provide information about the ancestral genetics of human beings.The primary aim of this research is to explore the significance of autosomal SNPs in forensic science through the identification of humans at a crime scene. A secondary qualitative research design has been selected for conducting this study. This secondary research is based on a systematic review of the studies which have provided an insight in the significance of autosomal SNPs in forensic sciences by using various Data search Engine. SNPs can be used in the forensic investigation for the identification of individuals present at the crime scene.

scholarly journals Varietal Identification of Open-Pollinated Onion Cultivars Using a Nanofluidic Array of Single Nucleotide Polymorphism (SNP) Markers

Agronomy ◽  
2018 ◽  
Vol 8 (9) ◽  
pp. 179
Author(s):  
Ji-Hee Lee ◽  
Arif Robin ◽  
Sathishkumar Natarajan ◽  
Hee-Jeong Jung ◽  
Ill-Sup Nou
Keyword(s):  
Allium Cepa ◽  
Early Spring ◽  
Snp Markers ◽  
Genetic Identity ◽  
Nucleotide Polymorphisms ◽  
Sulphur Compounds ◽  
Single Nucleotide ◽  
Statistical Validity ◽  
Allium Cepa L ◽  
Varietal Identification

Onions (Allium cepa L.) are a medicinally and economically important vegetable species rich in sulphur compounds, polyphenols, and antioxidants. In Korea, most of the onion cultivars are of the open-pollinated, heterozygous, short duration, and early spring type, which are generally harvested in April. Precise varietal identification is crucially important to warrant the authenticity of supreme onion genotypes, which aid in affirming the genetic identity of breeding materials at both the breeders and farmers levels. A set of markers identified from the double-digest restriction-site associated DNA sequencing (ddRAD-seq) database of Allium cepa L. and involving single nucleotide polymorphisms (SNPs) were deployed for genotyping deoxyribonucleic acid (DNA) samples extracted from seven genetically diverse onion cultivars collected in Korea and Japan. The validation process led us to designating 43 SNPs out of 48 that unequivocally identified all seven genotypes with high statistical validity (p < 0.001). Phylogenetic relationships and varietal identity among the cultivars were ascertained by Bayesian clustering and ordination analyses. Two genotypes, Singsingball and Taegeukhwang of Korean origin, showed a greater genetic distance from the five other onion cultivars. The SNP markers deployed in this study effectively authenticated the DNA fingerprints of the early spring onion cultivars utilizing a high-throughput genotyping protocol. The method exploited in this study provides an efficient pathway of verifying genetic identity of onion genotypes for their quality control. The markers developed are highly useful in the management and conservation of elite onion breeding materials at the farmers’ level.

Nuclear receptors in disease: the oestrogen receptors

2004 ◽  
Vol 40 ◽  
pp. 157-167 ◽  
Author(s):  
Maria Nilsson ◽  
Karin Dahlman-Wright ◽  
Jan-Åke Gustafsson
Keyword(s):  
Nuclear Receptors ◽  
Target Genes ◽  
Receptor Subtype ◽  
Target Tissue ◽  
Oestrogen Receptors ◽  
Nucleotide Polymorphisms ◽  
Cell Type ◽  
Single Nucleotide ◽  
Beneficial Effects ◽  
The Family

For several decades, it has been known that oestrogens are essential for human health. The discovery that there are two oestrogen receptors (ERs), ERalpha and ERbeta, has facilitated our understanding of how the hormone exerts its physiological effects. The ERs belong to the family of ligand-activated nuclear receptors, which act by modulating the expression of target genes. Studies of ER-knockout (ERKO) mice have been instrumental in defining the relevance of a given receptor subtype in a certain tissue. Phenotypes displayed by ERKO mice suggest diseases in which dysfunctional ERs might be involved in aetiology and pathology. Association between single-nucleotide polymorphisms (SNPs) in ER genes and disease have been demonstrated in several cases. Selective ER modulators (SERMs), which are selective with regard to their effects in a certain cell type, already exist. Since oestrogen has effects in many tissues, the goal with a SERM is to provide beneficial effects in one target tissue while avoiding side effects in others. Refined SERMs will, in the future, provide improved therapeutic strategies for existing and novel indications.

Development of a simple method for the determination of single nucleotide polymorphisms

2010 ◽  
Vol 34 (8) ◽  
pp. S75-S75
Author(s):  
Weifeng Zhu ◽  
Zhuoqi Liu ◽  
Daya Luo ◽  
Xinyao Wu ◽  
Fusheng Wan
Keyword(s):  
Single Nucleotide Polymorphisms ◽  
Nucleotide Polymorphisms ◽  
Simple Method ◽  
Single Nucleotide

Sex Differences in Childhood Associations between DNA Markers and General Cognitive Ability

2007 ◽  
Vol 28 (3) ◽  
pp. 161-164 ◽  
Author(s):  
Rosalind Arden ◽  
Nicole Harlaar ◽  
Robert Plomin
Keyword(s):  
Sex Differences ◽  
Single Nucleotide Polymorphisms ◽  
Cognitive Ability ◽  
Dna Markers ◽  
Community Sample ◽  
Nucleotide Polymorphisms ◽  
General Cognitive Ability ◽  
Single Nucleotide ◽  
The Difference

Abstract. An association between intelligence at age 7 and a set of five single-nucleotide polymorphisms (SNPs) has been identified and replicated. We used this composite SNP set to investigate whether the associations differ between boys and girls for general cognitive ability at ages 2, 3, 4, 7, 9, and 10 years. In a longitudinal community sample of British twins aged 2-10 (n > 4,000 individuals), we found that the SNP set is more strongly associated with intelligence in males than in females at ages 7, 9, and 10 and the difference is significant at 10. If this finding replicates in other studies, these results will constitute the first evidence of the same autosomal genes acting differently on intelligence in the two sexes.

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