scholarly journals First Detection of Bartonella spp. in Small Mammals from Rice Storage and Processing Facilities in Myanmar and Sri Lanka

2021 ◽  
Vol 9 (3) ◽  
pp. 658
Author(s):  
Inga Böge ◽  
Martin Pfeffer ◽  
Nyo M. Htwe ◽  
Pyai P. Maw ◽  
Siriwardana Rampalage Sarathchandra ◽  
...  
Keyword(s):  
Sri Lanka ◽  
Small Mammals ◽  
Target Genes ◽  
Bartonella Henselae ◽  
Rattus Rattus ◽  
Suncus Murinus ◽  
Mammal Species ◽  
Urban Settlements ◽  
D 12 ◽  
Zoonotic Bacteria

(1) Background: Bartonella spp. are zoonotic bacteria with small mammals as main reservoirs. Bartonella spp. prevalence in small mammals from Myanmar and Sri Lanka are yet unknown. (2) Methods: Small mammals were snap trapped in Sri Lanka and Myanmar in urban surroundings. Spleens-derived DNA was screened for Bartonella spp. using conventional PCR based on three target genes. Positive samples were sequenced. (3) Results: 994 small mammals were collected comprising 6 species: Bandicota bengalensis, Bandicota indica, Rattus exulans, Rattus rattus, Mus booduga, and Suncus murinus. In Myanmar, the Bartonella prevalence in Bandicoot rats (68.47%) was higher than in Rattus rattus (41.67%), Rattus exulans (21.33%), and Suncus murinus (3.64%). Furthermore the prevalence in Myanmar (34%, n = 495) was twice as high as in Sri Lanka (16%, n = 499). In Sri Lanka, Bartonella spp. occurred almost exclusively in R. rattus. In Myanmar, Bartonella kosoyi was mainly detected (56%), followed by Bartonella sp. KM2529 (15%), Bartonella sp. SE-Bart D (12%) and Bartonella henselae (1%). In Sri Lanka, B. phoceensis (60%) and Bartonella sp. KM2581 (33%) were predominant. (4) Conclusions: Bartonella spp. were detected in all investigated small mammal species from Myanmar and Sri Lanka for the first time. Bartonella kosoyi and B. henselae are zoonotic. As these small mammals originated from urban settlements, human bartonellosis seems likely to occur.

scholarly journals Identification of Novel Rodent-Borne Orthohantaviruses in an Endemic Area of Chronic Kidney Disease of Unknown Etiology (CKDu) in Sri Lanka

Viruses ◽  
2021 ◽  
Vol 13 (10) ◽  
pp. 1984
Author(s):  
Devinda S. Muthusinghe ◽  
Kenta Shimizu ◽  
Sithumini M. W. Lokupathirage ◽  
Zhouoxing Wei ◽  
Yomani D. Sarathkumara ◽  
...  
Keyword(s):  
Chronic Kidney Disease ◽  
Sri Lanka ◽  
Kidney Disease ◽  
Small Mammals ◽  
Endemic Area ◽  
Phylogenetic Analyses ◽  
Rattus Rattus ◽  
Genetic Evidence ◽  
Unknown Etiology ◽  
Sri Lankan

We reported the genetic evidence of circulating hantaviruses from small mammals captured in a chronic kidney disease of unknown etiology (CKDu) hotspot area of Sri Lanka. The high seroprevalence of anti-hantavirus antibodies against Thailand orthohantavirus (THAIV) has been reported among CKDu patients and rodents in Sri Lankan CKDu hotspots. We captured 116 small mammals from CKDu endemic regions in the Polonnaruwa District of Sri Lanka. Seven animals (five out of 11 Mus booduga and two out of 99 Rattus rattus) were PCR-positive for the hantavirus. A rat-borne sequence was grouped with a THAIV-like Anjozorobe virus. In contrast, Mus-borne sequences belonged to the THAIV lineage, suggesting a novel orthohantavirus species according to the phylogenetic analyses and whole-genome comparisons. Our genetic evidence indicates the presence of two THAIV-related viruses circulating in this CKDu endemic area, suggesting a basis for further investigations to identify the infectious virus in patients with CKDu and the CKDu induction mechanism of these viruses.

scholarly journals Habitat associations of small mammals in southern Brazil and use of regurgitated pellets of birds of prey for inventorying a local fauna

2007 ◽  
Vol 67 (4) ◽  
pp. 619-625 ◽  
Author(s):  
DR. Scheibler ◽  
AU. Christoff
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Rattus Rattus ◽  
Habitat Associations ◽  
Native Forest ◽  
Forest Fragments ◽  
Tyto Alba ◽  
Southern Brazil ◽  
Mammal Species ◽  
Barn Owls

We inventoried terrestrial small mammals in an agricultural area in southern Brazil by using trapping and prey consumed by Barn Owls (Tyto alba) and White-tailed Kites (Elanus leucurus). Small mammals were trapped in three habitat types: corn fields, uncultivated fields ("capoeiras"), and native forest fragments. A total of 1,975 small mammal specimens were trapped, another 2,062 identified from the diet of Barn Owls, and 2,066 from the diet of White-tailed Kites. Both trapping and prey in the predators' diet yielded 18 small mammal species: three marsupials (Didelphis albiventris, Gracilinanus agilis, and Monodelphis dimidiata) and 15 rodents (Akodon paranaensis, Bruceppatersonius iheringi, Calomys sp., Cavia aperea, Euryzygomatomys spinosus, Holochilus brasiliensis, Mus musculus, Necromys lasiurus, Nectomys squamipes, Oligoryzomys nigripes, Oryzomys angouya, Oxymycterus sp.1, Oxymycterus sp.2, Rattus norvegicus, and Rattus rattus (Linnaeus, 1758)). The greatest richness was found in the uncultivated habitat. We concluded that the three methods studied for inventorying small mammals (prey in the diet of Barn Owls, White-tailed Kites, and trapping) were complementary, since together, rather than separately, they produced a better picture of local richness.

Impact of habitat disturbance on the distribution of endemic species of small mammals and birds in a tropical rain forest in Sri Lanka

2005 ◽  
Vol 21 (6) ◽  
pp. 661-668 ◽  
Author(s):  
Mayuri R. Wijesinghe ◽  
M. de L. Brooke
Keyword(s):  
Sri Lanka ◽  
Small Mammals ◽  
Endemic Species ◽  
Rain Forest ◽  
Forest Disturbance ◽  
Indian Subcontinent ◽  
Rattus Rattus ◽  
Bird Species ◽  
Forest Conversion ◽  
Habitat Types

We tested whether species endemic to Sri Lanka were less able than non-endemics to tolerate disturbed habitats. Small mammals were surveyed in four habitat types along a disturbance gradient (unlogged forest, selectively logged forest, cultivated areas and areas abandoned after cultivation) within and around the Sinharaja rain forest in south-west Sri Lanka. Twenty 90-m×40-m plots were live trapped in each of these habitat types. Twelve taxa: nine rodents (Srilankamys ohiensis, Rattus rattus kelaarti, R. r. kandianus, Mus mayori, M. cervicolor, Bandicota indica, Funambulus layardi, F. sublineatus and F. palmarum) and three insectivores (Crocidura miya, Suncus zeylanicus and Feroculus feroculus) were recorded. Of these, five were endemic to Sri Lanka at the species level (species confined to the island) and six at subspecies level (subspecies confined to the island; other subspecies occurring on the Indian subcontinent). Species richness of small mammals decreased with the magnitude of forest disturbance. The endemic species selectively utilized sites within the forest whilst the majority of the other taxa used both forest and non-forest habitat types or were restricted to the latter. Bird surveys were carried out in the same plots, using sightings and calls. Sixty-six bird species were recorded, of which 21 were endemic species. Twenty endemic bird species preferentially used sites within the forest. The findings suggest that the forest-dwelling endemic species of both small mammal and bird encounter difficulties in tolerating modified landscapes, whilst other taxa are less affected. This highlights the vulnerability of endemic species to forest conversion.

scholarly journals Tick-Borne Zoonotic Bacteria in Wild and Domestic Small Mammals in Northern Spain

2007 ◽  
Vol 73 (19) ◽  
pp. 6166-6171 ◽  
Author(s):  
J. F. Barandika ◽  
A. Hurtado ◽  
C. García-Esteban ◽  
H. Gil ◽  
R. Escudero ◽  
...  
Keyword(s):  
Small Mammals ◽  
Spotted Fever ◽  
Blot Hybridization ◽  
Reverse Line Blot ◽  
Clethrionomys Glareolus ◽  
Spotted Fever Group ◽  
Northern Spain ◽  
Mammal Species ◽  
Spotted Fever Group Rickettsiae ◽  
Zoonotic Bacteria

ABSTRACT The prevalence and diversity of tick-borne zoonotic bacteria (Borrelia spp., Anaplasma phagocytophilum, Coxiella burnetii, and spotted fever group rickettsiae) infecting 253 small mammals captured in the Basque Country (Spain) were assessed using PCR and reverse line blot hybridization. Trapping sites were selected around sheep farms (study 1, 2000 to 2002) and recreational parks (study 2, 2003 to 2005). The majority of the studied mammals (162) were wood mice (Apodemus sylvaticus), but six other different species were also analyzed: yellow-necked mice (Apodemus flavicollis), shrews (Crocidura russula and Sorex coronatus), bank voles (Clethrionomys glareolus), domestic mice (Mus domesticus), and moles (Talpa europaea). The results showed an infection rate ranging from 10.7% to 68.8%, depending on the small mammal species. One C. russula shrew and one A. sylvaticus mouse gave positive reactions for A. phagocytophilum, and C. burnetii was detected in two domestic mice and one A. sylvaticus mouse in a farm. The DNA of Borrelia spp. was detected in 67 animals (26.5%), most of them presenting positive hybridization with the probe for Borrelia sp. strain R57, the new Borrelia species previously detected in small mammals in our region. Furthermore, a second PCR and reverse line blot hybridization specific for B. burgdorferi sensu lato revealed the presence of Borrelia afzelii in 6.3% of C. glareolus voles and 14.3% of S. coronatus shrews. All small mammals were negative for spotted fever group rickettsiae. These results highlight the relevance of small mammals as reservoirs of some zoonotic bacteria.

scholarly journals Impact of COVID-19 on child malnutrition, obesity in women and household food insecurity in underserved urban settlements in Sri Lanka: a prospective follow up study

2021 ◽  
pp. 1-24
Author(s):  
Renuka Jayatissa ◽  
Himali Herath ◽  
Amila Gayan Perera ◽  
Thulasika Thejani Dayaratne ◽  
Nawmali Dhanuska De Alwis ◽  
...  
Keyword(s):  
Sri Lanka ◽  
Food Insecurity ◽  
Child Malnutrition ◽  
Nutrition Status ◽  
Household Food Insecurity ◽  
Follow Up Study ◽  
Household Food ◽  
Before And After ◽  
Urban Settlements

Abstract Objectives: To determine changes and factors associated with child malnutrition, obesity in women and household food insecurity before and after the first wave of COVID-19 pandemic. Design: A prospective follow up study. Setting: In 2019, the baseline Urban Health and Nutrition Study (UHNS-2019) was conducted in 603 households, which were selected randomly from 30 clusters to represent underserved urban settlements in Colombo. In the present study, 35% of households from the UHNS-2019 cohort were randomly selected for repeat interviews, one year after the baseline study and 6 months after COVID-19 pandemic in Sri Lanka. Height/length and weight of children and women were re-measured, household food insecurity was reassessed, and associated factors were gathered through interviewer administered questionnaires. Differences in measurements at baseline and follow-up studies were compared. Participants: A total of 207 households, comprising 127 women and 109 children were included. Results: The current prevalence of children with wasting and overweight was higher in the follow-up study than at baseline UHNS-2019 (18.3%vs13.7%;p=0.26 and 8.3%vs3.7%;p=0.12 respectively). There was a decrease in prevalence of child stunting (14.7%vs11.9%;p=0.37). A change was not observed in overall obesity in women, which was around 30.7%. Repeated lockdown was associated with a significant reduction in food security from 57% in UHNS-2019 to 30% in the current study (p<0.001). Conclusions: There was an increase in wasting and overweight among children while women had a persistent high prevalence of obesity. This population needs suitable interventions to improve nutrition status of children and women to minimise susceptibility to COVID-19.

scholarly journals Diversity and Diet Differences of Small Mammals in Commensal Habitats

Diversity ◽  
2021 ◽  
Vol 13 (8) ◽  
pp. 346
Author(s):  
Linas Balčiauskas ◽  
Laima Balčiauskienė ◽  
Andrius Garbaras ◽  
Vitalijus Stirkė
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Trophic Ecology ◽  
Mammal Species ◽  
Additional Food ◽  
Δ13c And Δ15n ◽  
Degree Of Separation ◽  
Kitchen Gardens ◽  
Dietary Plasticity ◽  
The Stability

The stability of diversity of syntopic (inhabiting the same habitat in the same time) small mammals in commensal habitats, such as farmsteads and kitchen gardens, and, as a proxy of their diet, their isotopic niches, was investigated in Lithuania in 2019–2020. We tested whether the separation of species corresponds to the trophic guilds, whether their diets are related to possibilities of getting additional food from humans, and whether their diets are subject to seasonal trends. We analyzed diversity, dominance and distribution of hair δ13C and δ15N values. Diversity and dominance was not stable and differed according to human influence. The highest small mammal species richness occurred in commensal habitats that provided additional food. The degree of separation of species was higher in homestead habitats than in kitchen gardens, where a 1.27 to 35.97% overlap of isotopic niches was observed between pairs of species. Temporal changes in δ13C and δ15N values in the hair of the mammals were not equally expressed in different species. The isotopic overlap may depend on dietary plasticity, minimizing interspecific competition and allowing co-existence of syntopic species. Thus, small mammal trophic ecology is likely related to intensity of agricultural activities in the limited space of commensal habitats.

Small mammal mycophagy in hemiboreal forest communities of Lithuania

2011 ◽  
Vol 6 (3) ◽  
pp. 446-456 ◽  
Author(s):  
Marija Kataržytė ◽  
Ernestas Kutorga
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Fungal Spores ◽  
Seasonal Effects ◽  
Deciduous Tree ◽  
Myodes Glareolus ◽  
Mammal Species ◽  
Hypogeous Fungi ◽  
Fecal Samples ◽  
Significant Difference

AbstractThe diets of small mammals in different hemiboreal spruce-dominated, oak-dominated and mixed forests in western part of Lithuania were studied by examination of fungal spores in fresh fecal pellets of caught animals. In the diets of mice (Apodemus spp.), bank voles (Myodes glareolus), and common and pygmy shrews (Sorex araneus and S. minutus), 22 different fungal taxa were identified, 15 of which were hypogeous fungi. The sporocarp abundance and the spores in fecal samples of Elaphomyces fungi prevailed in study area during this investigation. Although most of the captured individuals consumed fungi, the consumption varied among small mammal species. The data show that the fungi were more frequent and taxonomically diverse in Myodes glareolus than in Apodemus spp. diets. The study provided evidence that the fungal component in the diets of insectivorous Sorex species is more diverse than previously known. The availability of sporocarps and the fungal component in the diets of small mammals showed seasonal effects. Annual hypogeous and epigeous sporocarp abundances did not vary significantly across forest types. The significant difference in mycophagy was observed across all forest cover types, with the greatest fungal diversity in fecal samples collected in mixed coniferous-deciduous tree stands.

Powerline Easements: Do They Promote Edge Effects in Eucalypt Forest for Small Mammals?

1997 ◽  
Vol 24 (6) ◽  
pp. 737 ◽  
Author(s):  
Ross L. Goldingay ◽  
Robert J. Whelan
Keyword(s):  
Small Mammals ◽  
Edge Effects ◽  
Native Species ◽  
Vegetative Cover ◽  
Mammal Species ◽  
Terrestrial Mammals ◽  
Eucalypt Forest ◽  
Hair Sampling ◽  
South Wales ◽  
Antechinus Stuartii

The distribution and abundance of small terrestrial mammals were assessed in forest adjacent to powerline easements at three different sites in New South Wales. At each site, four transects of 300 m length extended into the forest from the edge of the easement. The abundances of two native species (Antechinus stuartii, Rattus fuscipes) did not differ significantly with distance from the easement but abundances differed markedly among sites. Mammals were captured in only one easement where dense vegetation was present. Feral carnivores, which may mediate edge effects on small mammals, were surveyed by using hair-sampling tubes. Cats and dogs were detected only 50–200 m inside the forest. Foxes were not detected by hair-tubes but were observed on two easements. These results suggest that powerline easements may not create edge effects in eucalypt forest for some native mammal species, although further studies are needed to determine the generality of this conclusion. We recommend that easement management should be more benign to native mammals, given the ubiquity of this form of habitat fragmentation. Promotion of dense vegetative cover and habitat linkages within easements could achieve this.

An attempt to determine the size of the Common Barn-owl’s (Tyto alba) hunting area based on its prey composition

2021 ◽  
pp. 175815592110660
Author(s):  
Jenő J Purger ◽  
Dávid Szép
Keyword(s):  
Functional Groups ◽  
Small Mammals ◽  
Small Mammal ◽  
Barn Owl ◽  
Tyto Alba ◽  
Mammal Species ◽  
Open Forest ◽  
Prey Composition ◽  
Small Mammal Species ◽  
Owl Pellets

The relative abundance of small mammal species detected from Common Barn-owl pellets reflects the landscape structure and habitat pattern of the owl’s hunting area, but it is also affected by the size of the collected pellet sample and the size of the supposed hunting area. The questions arise: how many pellets should be collected and analyzed as well as how large hunting area should be taken into consideration in order to reach the best correspondence between the owl’s prey composition and the distribution of habitats preferred by small mammals preyed in supposed hunting areas? For this study, we collected 1045 Common Barn-owl pellets in a village in southern Hungary. All detected small mammal species were classified into functional groups (guilds) preferring urban, open, forest and wetland habitats. The proportion of functional groups was compared to the proportion of these habitats around the pellet collection site within circles of one, two, and three km radius. Saturation curves showed that at least 300 pellets or ca. 600 mammalian remains are required for the detection of the 19 small mammal species. The share of small mammals detected in the prey and their functional groups according to their habitat preference showed an increasing consistency with the distribution of real habitats in the potential hunting area of a radius of 3 km around the owl’s breeding or resting place.

scholarly journals Small mammals of the Addo Elephant National Park

Koedoe ◽  
1975 ◽  
Vol 18 (1) ◽  
Author(s):  
P. Swanepoel
Keyword(s):  
Introduced Species ◽  
Small Mammals ◽  
National Park ◽  
Sex Ratios ◽  
Rattus Rattus ◽  
Reproductive Activity ◽  
Body Measurements ◽  
Suricata Suricatta ◽  
Rhabdomys Pumilio ◽  
Mus Minutoides

A survey of the small mammals of the Addo Elephant National Park resulted in a checklist, as well as information on relative numbers, distribution within the Park, reproductive activity, sex ratios, and body measurements. Forty mammals species occur in the Park, while three re-introduced species probably do not occur any longer. Of the 40 species 28 are considered small mammals comprising 13 rodent, eight carnivore, two shrew, two bat, one primate and one lagomorph species, as well as the aardvark: Crociduraflavescens, C. cyanea infumata, Rousettus aegyptiacus, Eptesicus capensis, Cercopithecus pygerythrus, Canis mesomelas, Ictonyx striatus, Poecilogale albinucha, Genetta sp., Herpestes pulverulentus, Suricata suricatta, Proteles cristatus, Felis caracal, Orycteropus afer, Lepus saxatilis, Cryptomys hottentotus, Hystrix africae-australis, Pedetes capensis, Graphiurus murinus, Aethomys namaquensis, Praomys natalensis, Rhabdomys pumilio, Mus minutoides, Rattus rattus, Saccostomys campestris, Desmodillus auricularis, Otomys irroratus and 0. unisulcatus.

Sign in / Sign up

Export Citation Format

Share Document