scholarly journals Dynamics of Polymer Membrane Swelling in Aqueous Suspension of Amino-Acids with Different Isotopic Composition; Photoluminescence Spectroscopy Experiments

Polymers ◽  
2021 ◽  
Vol 13 (16) ◽  
pp. 2635
Author(s):  
Nikolai F. Bunkin ◽  
Polina N. Bolotskova ◽  
Elena V. Bondarchuk ◽  
Valery G. Gryaznov ◽  
Valeriy A. Kozlov ◽  
...  

In photoluminescence spectroscopy experiments, the interaction mode of the polymer membrane Nafion with various amino-acids was studied. The experiments were performed with physiological NaCl solutions prepared in an ordinary water (the deuterium content is 157 ± 1 ppm) and also in deuterium-depleted water (the deuterium content is ≤1 ppm). These studies were motivated by the fact that when Nafion swells in ordinary water, the polymer fibers are effectively “unwound” into the liquid bulk, while in the case of deuterium-depleted water, the unwinding effect is missing. In addition, polymer fibers, unwound into the liquid bulk, are similar to the extracellular matrix (glycocalyx) on the cell membrane surface. It is of interest to clarify the role of unwound fibers in the interaction of amino-acids with the polymer membrane surface. It turned out that the interaction of amino-acids with the membrane surface gives rise to the effects of quenching luminescence from the luminescence centers. We first observed various dynamic regimes arising upon swelling the Nafion membrane in amino-acid suspension with various isotopic content, including triggering effects, which is similar to the processes in the logical gates of computers.

Author(s):  
N.F. Bunkin ◽  
S.V. Bashkin ◽  
Y.T. Juraev ◽  
R.S. Safronenkov ◽  
V.A. Kozlov

The study focuses on rheological effects which appear during swelling of the Nafion proton-exchange membrane in cuvettes of different thicknesses, and explains the effects by the appearance of the so-called excluded zone near the membrane surface. The excluded zone is the polymer fibers of the Nafion membrane, deployed towards bulk water. The depth of fiber penetration into the volume or the size of the excluded zone depends on the deuterium content in the water. It should be noted that in the process of swelling of the Nafion membrane plate in water it is structurally rearranged, which leads to a transition from a hydrophobic state to a hydrophilic one. By means of experimental methods based on Fourier transform infrared spectrophotometry, the study shows that the swelling of the Nafion membrane plate, which is initially hydrophobic, in ordinary water (deuterium content is 157 ppm) and in deuterium-depleted water (deuterium content is 1 ppm) in a cuvette of limited volume occurs differently. Small changes in the deuterium content in water turned out to lead to significant differences in the dynamics of swelling of the polymer membrane. For a 175-micron-thick Nafion membrane plate, this effect is most evident when the distance between the cuvette windows is L = 200 microns


2021 ◽  
Author(s):  
Richard P Rode ◽  
Saeed Moghaddam

Membrane biofouling has inhibited permselective separation processes for decades, requiring frequent membrane backwash treatment or replacement to maintain efficacy. However, frequent treatment is not viable for devices with a continuous blood flow such as a wearable or implantable dialyzer. In this study, the biofouling characteristics of a highly hemocompatible graphene oxide (GO) membrane developed through a novel self-assembly process is studied in a protein-rich environment and compared with performance of a state-of-the-art commercial polymer membrane dialyzer. The studies are conducted in phosphate-buffered saline (PBS) environment using human serum albumin (HSA), which represents 60% of the blood protein, at the nominal blood protein concentration of 1 g L-1. Protein aggregation on the membrane surface is evaluated by monitoring the change in the membrane flux and SEM imaging. The GO membrane water flux declined only ~10% over a week-long test whereas the polymer membrane flux declined by 50% during the same period. The SEM images show that HSA primarily aggerates over the graphitic regions of nanoplatelets, away from the charged hydrophilic edges. This phenomenon leaves the open areas of the membrane formed between the nanoplatelets edges, through which the species pass, relatively intact. In contrast, HSA completely plugs the polymer membrane pores resulting in a steady decline in membrane permeability.


Author(s):  
Xinying Su ◽  
Xin Cheng ◽  
Yu Wang ◽  
Jintao Luo

Abstract This study aimed to determine the effects of D-tyrosine, D-aspartic acid, D-tryptophan and D-leucine on biofilm formation of mixed microorganisms. Results showed that, in the attachment stage, D-amino acids caused significant reduction in adhesion efficiency of mixed microorganisms to membrane surface. Moreover, D-amino acids have a promoting effect on the reversible adhesion of mixed microorganisms. The addition of D-amino acid generally inhibited the biofilm biomass, of which D-tyrosine has the best inhibition effect. With the effect of D-tyrosine, D-aspartic acid, D-tryptophan and D-leucine, the protein in extracellular polymeric substance (EPS) decreased by 8.21%, 7.65%, 3.51% and 11.31%, respectively. The carbohydrates in EPS decreased by 29.53%, 21.44%, 14.60% and 10.54%, respectively. The results of excitation-emission matrix spectra (EEMs) suggested that the structural properties of the tyrosine-like proteins, tryptophan-like protein and humic-like acid might have changed by the D-amino acids.


2010 ◽  
Vol 107 (9) ◽  
pp. 4341-4346 ◽  
Author(s):  
A. J. Farrand ◽  
S. LaChapelle ◽  
E. M. Hotze ◽  
A. E. Johnson ◽  
R. K. Tweten
Keyword(s):  

2018 ◽  
Vol 54 (1) ◽  
pp. 70-73 ◽  
Author(s):  
Joseph Imbrogno ◽  
Luke Rogers ◽  
Dale A. Thomas ◽  
Klavs F. Jensen

Liquid–liquid extraction followed by dual membrane based phase separation in flow enables fully continuous purification of active pharmaceutical ingredients.


ASAIO Journal ◽  
1996 ◽  
Vol 42 (2) ◽  
pp. 16
Author(s):  
K. Imachi ◽  
T. Chinzei ◽  
Y. Abe ◽  
K. Mabuchi ◽  
T. Isoyama ◽  
...  

1996 ◽  
Vol 133 (2) ◽  
pp. 269-280 ◽  
Author(s):  
J M Dyer ◽  
J A McNew ◽  
J M Goodman

No targeting sequence for peroxisomal integral membrane proteins has yet been identified. We have previously shown that a region of 67 amino acids is necessary to target Pmp47, a protein that spans the membrane six times, to peroxisomes. This region comprises two membrane spans and the intervening loop. We now demonstrate that the 20 amino acid loop, which is predicted to face the matrix, is both necessary and sufficient for peroxisomal targeting. Sufficiency was demonstrated with both chloramphenicol acetyltransferase and green fluorescent protein as carriers. There is a cluster of basic amino acids in the middle of the loop that we predict protrudes from the membrane surface into the matrix by a flanking stem structure. We show that the targeting signal is composed of this basic cluster and a block of amino acids immediately down-stream from it.


Author(s):  
A. S. Alekseeva ◽  
P. E. Volynsky ◽  
I. A. Boldyrev

Abstract The regulation of the activity and selectivity of phospholipase A2 (PLA2), which is capable of cleaving fatty acid in the second position (sn-2) of the phospholipid, is carried out through the membrane-binding and catalytic sites of the enzyme. For hydrolytic activity, PLA2 must first bind to the phospholipid membrane, and the binding efficiency depends on the composition of the membrane. The membrane-binding site of PLA2 is formed by several tens of amino acids and its composition differs from enzyme to enzyme; hydrophobic and positively charged amino acids play a key role in the interaction. In this work, we investigated the interaction of PLA2 from bee venom with phospholipid bilayers of palmitoyl oleoylphosphatidylcholine (POPC) containing different amounts of palmitoyloleoylphosphatidylglycerol (POPG). On the basis of the measurements of the protein intrinsic fluorescence and the anisotropy of the fluorescence of the lipid probe we propose the construction of lipid–protein interaction maps, which reflect both the efficiency of protein binding and changes in the structure of the membrane. These changes cause alterations in the fluorescence anisotropy of the label, which in turn is a measure of the mobility of the lipid environment of the fluorescent probe. Analysis of interaction maps showed that there is a relationship between lipid mobility and enzyme binding efficiency: the optimum interaction of PLA2 with membranes from a POPC/POPG mixture lies in the region of the highest lipid mobility, and not in the region of the highest negative charge. This dependence complements the existing understanding of the process of recognition of the membrane surface by the enzyme and the selection of lipids by the enzyme already bound to the membrane. The proposed mapping method can be extended to other membrane-active proteins.


Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 3977-3977
Author(s):  
Melissa A. Blum ◽  
Daniel O. Beck ◽  
Michael Kalafatis

Abstract The procoagulant enzymatic complex, prothrombinase, which is required for normal hemostasis, is composed of the enzyme, factor Xa, the protein cofactor, factor Va, associated on a cell surface in the presence of divalent metal ions. Incorporation of factor Va into prothrombinase and its interaction with factor Xa increases the catalytic efficiency of the enzyme by five orders of magnitude as compared to factor Xa alone. While the importance of the contribution of factor Va to the activity of factor Xa for rapid thrombin formation by prothrombinase at the place of vascular injury has been long established, the consequence of the interaction of the cofactor with the members of prothrombinase and the molecular mechanism by which factor Va accelerates prothrombin activation remains an enigma. Prothrombin is activated following two cleavages (Arg271/Arg320). Depending on the order of peptide bond cleavage different intermediates are formed. Factor Xa alone cleaves prothrombin sequentially, first at Arg271 to produce fragment 1•2 and prethrombin-2, followed by cleavage at Arg320 to produce fragment 1•2 and thrombin. The prothrombinase complex catalyzes the activation of prothrombin following the opposite pathway (Arg320 followed by Arg271), resulting in a formation of an active intermediate (meizothrombin) and a 300,000-fold increase in the rate of the overall reaction compared with the rate of prothrombin activation observed with factor Xa alone. We have shown that amino acid region 307–348 of factor Va heavy chain is critical for cofactor activity. A peptide containing this amino acid sequence (42 amino acids, N42R) was found to interact with fluorescently labeled factor Xa and to inhibit prothrombinase activity. Our present data show that N42R can be cross-linked to the heavy chain of membrane-bound factor Xa in the presence of 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC). We have also demonstrated that amino acid region 323–331 from N42R (AP4′) contains a binding site for factor Xa of factor Va heavy chain. Our present data show that a peptide containing amino acid residues 317–326 (AP3) inhibited both prothrombinase activity and the high affinity interaction of factor Va with factor Xa on the membrane surface. Moreover, we have found using site directed mutagenesis and recombinant factor Va that amino acids at the NH2-terminal end of AP4′ (i.e. residues 323–325, Glu-Tyr-Phe) are responsible for the inhibitory effect of AP3 and AP4′ and are crucial for the interaction of factor Va with factor Xa. A tripeptide with this sequence inhibited prothrombinase activity in an assay using a fluorescent thrombin inhibitor. To identify the effect of these peptides on factor Xa’s ability to cleave and activate prothrombin, we studied prothrombin activation by gel electrophoresis. The data demonstrated that several peptides that inhibited both the factor Va-factor Xa interaction on the membrane surface and prothrombinase activity, had the ability to accelerate cleavage of prothrombin by factor Xa alone, in the absence of factor Va. Specifically, N42R and AP3 were found to increase the rate of prothrombin consumption by factor Xa by approximately four-fold when compared to factor Xa acting alone. Both peptides induced acceleration in prethrombin-2 formation suggesting an increased in the rate of cleavage of prothrombin at Arg271. These data suggest that the binding of factor Va to factor Xa through amino acid region 323–331 alone produces an effect on factor Xa that increases its potency for cleavage at Arg271.


Author(s):  
A. M. KOLDINA ◽  
E. V. USPENSKAYA ◽  
A. A. BORODIN ◽  
T. V. PLETENEVA ◽  
A. V. SYROESHKIN

Objective: Development of a methodology for measuring the deuterium content in water for pharmaceutical purposes by laser light scattering based on ideas about the cluster structure of water. Methods: Samples of industrially manufactured drinking water from different manufacturers with varying deuterium content from 10 ppm to 115 ppm. For the titration of laboratory samples of deuterium depleted water in increments of 5 ppm the following reagents were used: Water, deuterium-depleted (≤1 ppm (D2O, Aldrich, USA); Deuterium oxide/Heavy water/Water-d2 (99.9 atom % D, Aldrich, USA); water Milli-Q (specific resistance 18.2 µS·sm at 25 оС, ТОС ≤ 5 ppb, Merck Millipore). The determination of deuterium content in samples of industrially manufactured water and water obtained in a laboratory manner was carried out by the method of low-angle laser light scattering (LALLS) at the Mastersizer (Malvern Instruments) analyzer and using a working measuring tool–laser dispersion meter/MDL («Cluster-1», Russia/Ukraine). The statistical methods–packages OriginPro®9. Results: It was found that the content of isotopologies in water leads to physicochemical water’s properties changes and morphology changes of giant heterogeneous clusters (GHC). The results of low-angle laser light scattering (LALLS) in the water samples under investigation showed the dependence of the water GHC "dispersibility" expressed in the differentiation of curves of the volume size distribution ("size spectra"), the volume concentration, w%, the laser obscuration values (I ‒I0) as the function of the water isotopic composition variations. The laser diffraction method results correlate with two-dimensional (2D) multi-descriptor mathematical analysis. Conclusion: When identifying deuterium depleted water, it should be considered not only the indicators that determine its pharmacopoeial quality, but also the D/H ratio, because even small changes in the natural isotopic composition of water lead to significant biological effects. Our proposed approach using laser diffraction in combination with mathematical apparatus of (2D) multi-descriptor laser scattering analysis makes possible the exact calculation of individual signs of deuterium depleted water as the pharmaceutical object of study.


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