Toxoflavin secreted by Pseudomonas alcaliphila inhibits growth of Legionella pneumophila and its host Vermamoeba vermiformis

Legionella pneumophila is a natural inhabitant of water systems. From there, it can be transmitted to humans by aerosolization resulting in severe pneumonia. Most large outbreaks are caused by cooling towers contaminated with L. pneumophila. The resident microbiota of the cooling tower is a key determinant for the colonization and growth of L. pneumophila. The genus Pseudomonas correlates negatively with the presence of L. pneumophila, but it is not clear which species is responsible. Therefore, we identified the Pseudomonas species inhabiting 14 cooling towers using a Pseudomonas-specific 16S rRNA amplicon sequencing strategy. Cooling towers free of L. pneumophila contained a high relative abundance of members from the Pseudomonas alcaliphila/oleovorans phylogenetic cluster. In vitro, P. alcaliphila JCM 10630 inhibited the growth of L. pneumophila on agar plates. Analysis of the P. alcaliphila genome revealed the presence of a genes cluster predicted to produce toxoflavin. L. pneumophila growth was inhibited by pure toxoflavin and by extract from P. alcaliphila culture found to contain toxoflavin by LC-ESI-MS. In addition, toxoflavin inhibits growth of Vermameoba vermiformis, a host cell of L. pneumophila. Our study indicates that P. alcaliphila may be important to restrict growth of L. pneumophila in water systems through the production of toxoflavin. A sufficiently high concentration is likely not achieved in the bulk water but might have a local inhibitory effect such as in biofilm.

Зондирование водогазонасыщенных насыпных сред переотраженными волнами непосредственно после воздействия ударной волны

The possibility of using re-reflected waves for sounding bulk water-gas-saturated media after exposure to a shock wave has been investigated. Results are shown using probing pulses.

Проявление линии Видома при микроволновых измерениях увлажненных перекисью водорода сорбентов

For deeply supercooled bulk water, anomalies of thermodynamic values are known near the Widom line, the locus of increased fluctuations of entropy and density. In this work, we measured the reflected power of microwave radiation at a frequency of 18 GHz from a silicate sorbent sample moistened with a hydrogen peroxide solution. In the experiment, we observed variations in the recorded reflected radiation power in the range –46 – –47 °С, determined by structural changes in the liquid. Thus, it is shown that fluctuations of water parameters near the Widom line are manifested in changes not only in thermodynamic, but also in electrophysical quantities.

Superhydrophilicity of $\alpha$-Alumina Surfaces Results from Tight Binding of Interfacial Waters to Specific Aluminols

Understanding the microscopic driving force of water wetting is challenging and important for design of materials. In this work, we investigate, using classical molecular dynamics simulations, the water/$\alpha$-alumina (0001) and ($11\overline{2}0$) interfaces chosen for their chemical and physical differences. There is only one type of aluminol group on the nominally flat (0001) surface but three types on the microscopically rougher ($11\overline{2}0$) surface. We find that both surfaces are completely wet, consistent with contact angles of zero. Moreover, the work required to remove water from a nanoscale volume at the interface is larger for the (0001) surface than the ($11\overline{2}0$) surface, suggesting that the (0001) surface is more hydrophilic. In addition, translational and rotational dynamics of interfacial water molecules are slower than that in bulk water, suggesting tight binding to the surface. Interfacial waters show two major polar orientations, either pointing to or away from the solid surface. In the former case, waters donate strong hydrogen bonds to the surface, while in the latter they accept relatively weak ones from aluminol groups. The strength of hydrogen bonds is estimated using their lifetime and geometry. We found that for all aluminols, water-to-aluminol hydrogen bonds are stronger and have longer lifetimes than the aluminol-to-water ones. One exception is the long lifetime of the \ce{Al3OH}-water hydrogen bonds on the ($11\overline{2}0$) surface, due to geometric constraints. Interactions between surfaces and interfacial waters promote a templating effect whereby the latter are aligned in a pattern that follows the underlying lattice of the mineral surface.

Experimental evidence of non-classical brain functions

Exploring unknown quantum systems is an experimental challenge. Recent proposals exploring quantum gravity have suggested circumventing this problem by considering the unknown system as a mediator between two known systems. If such a mediation can locally generate entanglement in the known systems, then the mediator must be non-classical. The same approach may be applicable to other systems, in particular the brain, where speculations about quantum operations in consciousness and cognition have a long history. Translated to the brain, the mediator is then an unknown brain function. For the quantum systems, we could use proton spins of bulk water, which most likely interfere with the any brain function. Entanglement in these spins can be witnessed with multiple quantum coherence (MQC). We based our witness protocol on zero quantum coherence (ZQC) whereby potential signals from local properties were minimised. For short repetitive periods, we found ZQC signals in large parts of the brain, whereby the temporal appearance resembled heartbeat-evoked potentials (HEPs). Similar to HEPs, we also found that the ZQC signal depended on conscious awareness. Consciousness-related signals have, to our knowledge, not yet been reported in NMR. Remarkably, we could exclude local properties as contrast mechanism because (a) the ZQC signals had no correlates known in conventional MRI, and (b) the ZQC signals only appeared if the local properties of the magnetisation, which are complementary to non-local properties, were reduced. Our findings suggest that we may have witnessed entanglement mediated by consciousness-related brain functions. Those brain functions must then operate non-classically, which would mean that consciousness is non-classical.

Low frequency weak electric fields can induce structural changes in water

Low frequency electric fields were exposed to various water samples using platinum electrodes mounted near the water surface. Responses were monitored using a spectro-radiometer and a contact-angle goniometer. Treatment of DI (deionized), EZ (Exclusion Zone), and bulk water with certain electromagnetic frequencies resulted in a drop of radiance persisting for at least half an hour. Compared to DI water, however, samples of EZ and bulk water showed lesser radiance drop. Contact-angle goniometric results confirmed that when treated with alternating electric fields (E = 600 ± 150 V/m, f = 7.8 and 1000 Hz), droplets of EZ and bulk water acquired different charges. The applied electric field interacted with EZ water only when electrodes were installed above the chamber, but not beneath. Further, when DI water interacted with an electric field applied from above (E = 600 ± 150 V/m, f = 75 Hz), its radiance profile became similar to that of EZ water. Putting these last two findings together, one can say that application of an electric field on DI water from above (E = 600 ± 150 V/m, f = 7.8 to 75 Hz) may induce a molecular ordering in DI water similar to that of EZ water.

The Proton in Biochemistry: Impacts on Bioenergetics, Biophysical Chemistry, and Bioorganic Chemistry

The proton is the smallest atomic particle, and in aqueous solution it is the smallest hydrated ion, having only two waters in its first hydration shell. In this article we survey key aspects of the proton in chemistry and biochemistry, starting with the definitions of pH and pKa and their application inside biological cells. This includes an exploration of pH in nanoscale spaces, distinguishing between bulk and interfacial phases. We survey the Eigen and Zundel models of the structure of the hydrated proton, and how these can be used to explain: a) the behavior of protons at the water-hydrophobic interface, and b) the extraordinarily high mobility of protons in bulk water via Grotthuss hopping, and inside proteins via proton wires. Lastly, we survey key aspects of the effect of proton concentration and proton transfer on biochemical reactions including ligand binding and enzyme catalysis, as well as pH effects on biochemical thermodynamics, including the Chemiosmotic Theory. We find, for example, that the spontaneity of ATP hydrolysis at pH ≥ 7 is not due to any inherent property of ATP (or ADP or phosphate), but rather to the low concentration of H+. Additionally, we show that acidification due to fermentation does not derive from the organic acid waste products, but rather from the proton produced by ATP hydrolysis.

First observation of radiolytic bubble formation in unstirred nano-powder sludges and a consistent model thereof

Experiments involving the irradiation of water contained within magnesium hydroxide and alumina nanoparticle sludges were conducted and culminated in observations of an increased yield of molecular hydrogen when compared to the yield from the irradiation of bulk water. We show that there is a relationship linking this increased yield to the direct nanoscale ionization mechanism in the nanoparticles, indicating that electron emission from the nanoparticles drives new radiative pathways in the water. Because the chemical changes in these sludges are introduced by irradiation only, we have a genuinely unstirred system. This feature allows us to determine the diffusivity of the dissolved gas. Using the measured gas production rate, we have developed a method for modelling when hydrogen bubble formation will occur within the nanoparticle sludges. This model facilitates the determination of a consistent radiolytic consumption rate coinciding with the observations of bubble formation. Thus, we demonstrate a nanoscale radiation effect directly influencing the formation of molecular hydrogen.

Understanding Hydrophobic Effects: Insights from Water Density Fluctuations

The aversion of hydrophobic solutes for water drives diverse interactions and assemblies across materials science, biology, and beyond. Here, we review the theoretical, computational, and experimental developments that underpin a contemporary understanding of hydrophobic effects. We discuss how an understanding of density fluctuations in bulk water can shed light on the fundamental differences in the hydration of molecular and macroscopic solutes; these differences, in turn, explain why hydrophobic interactions become stronger upon increasing temperature. We also illustrate the sensitive dependence of surface hydrophobicity on the chemical and topographical patterns the surface displays, which makes the use of approximate approaches for estimating hydrophobicity particularly challenging. Importantly, the hydrophobicity of complex surfaces, such as those of proteins, which display nanoscale heterogeneity, can nevertheless be characterized using interfacial water density fluctuations; such a characterization also informs protein regions that mediate their interactions. Finally, we build upon an understanding of hydrophobic hydration and the ability to characterize hydrophobicity to inform the context-dependent thermodynamic forces that drive hydrophobic interactions and the desolvation barriers that impede them. Expected final online publication date for the Annual Review of Condensed Matter Physics, Volume 13 is March 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.

The energetic barrier to single-file water flow through narrow channels

Various nanoscopic channels of roughly equal diameter and length facilitate single-file diffusion at vastly different rates. The underlying variance of the energetic barriers to transport is poorly understood. First, water partitioning into channels so narrow that individual molecules cannot overtake each other incurs an energetic penalty. Corresponding estimates vary widely depending on how the sacrifice of two out of four hydrogen bonds is accounted for. Second, entropy differences between luminal and bulk water may arise: additional degrees of freedom caused by dangling OH-bonds increase entropy. At the same time, long-range dipolar water interactions decrease entropy. Here, we dissect different contributions to Gibbs free energy of activation, ΔG‡, for single-file water transport through narrow channels by analyzing experimental results from water permeability measurements on both bare lipid bilayers and biological water channels that (i) consider unstirred layer effects and (ii) adequately count the channels in reconstitution experiments. First, the functional relationship between water permeabilities and Arrhenius activation energies indicates negligible differences between the entropies of intraluminal water and bulk water. Second, we calculate ΔG‡ from unitary water channel permeabilities using transition state theory. Plotting ΔG‡ as a function of the number of H-bond donating or accepting pore-lining residues results in a 0.1 kcal/mol contribution per residue. The resulting upper limit for partial water dehydration amounts to 2 kcal/mol. In the framework of biomimicry, our analysis provides valuable insights for the design of synthetic water channels. It thus may aid in the urgent endeavor towards combating global water scarcity.