scholarly journals The Impact of Pan-Sharpening and Spectral Resolution on Vineyard Segmentation through Machine Learning

2020 ◽  
Vol 12 (6) ◽  
pp. 934 ◽  
Author(s):  
Eriita G. Jones ◽  
Sebastien Wong ◽  
Anthony Milton ◽  
Joseph Sclauzero ◽  
Holly Whittenbury ◽  
...  

Precision viticulture benefits from the accurate detection of vineyard vegetation from remote sensing, without a priori knowledge of vine locations. Vineyard detection enables efficient, and potentially automated, derivation of spatial measures such as length and area of crop, and hence required volumes of water, fertilizer, and other resources. Machine learning techniques have provided significant advancements in recent years in the areas of image segmentation, classification, and object detection, with neural networks shown to perform well in the detection of vineyards and other crops. However, what has not been extensively quantitatively examined is the extent to which the initial choice of input imagery impacts detection/segmentation accuracy. Here, we use a standard deep convolutional neural network (CNN) to detect and segment vineyards across Australia using DigitalGlobe Worldview-2 images at ∼50 cm (panchromatic) and ∼2 m (multispectral) spatial resolution. A quantitative assessment of the variation in model performance with input parameters during model training is presented from a remote sensing perspective, with combinations of panchromatic, multispectral, pan-sharpened multispectral, and the spectral Normalised Difference Vegetation Index (NDVI) considered. The impact of image acquisition parameters—namely, the off-nadir angle and solar elevation angle—on the quality of pan-sharpening is also assessed. The results are synthesised into a ‘recipe’ for optimising the accuracy of vineyard segmentation, which can provide a guide to others aiming to implement or improve automated crop detection and classification.

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e3131 ◽  
Author(s):  
Müşerref Duygu Saçar Demirci ◽  
Jens Allmer

Gene regulation modulates RNA expression via transcription factors. Post-transcriptional gene regulation in turn influences the amount of protein product through, for example, microRNAs (miRNAs). Experimental establishment of miRNAs and their effects is complicated and even futile when aiming to establish the entirety of miRNA target interactions. Therefore, computational approaches have been proposed. Many such tools rely on machine learning (ML) which involves example selection, feature extraction, model training, algorithm selection, and parameter optimization. Different ML algorithms have been used for model training on various example sets, more than 1,000 features describing pre-miRNAs have been proposed and different training and testing schemes have been used for model establishment. For pre-miRNA detection, negative examples cannot easily be established causing a problem for two class classification algorithms. There is also no consensus on what ML approach works best and, therefore, we set forth and established the impact of the different parts involved in ML on model performance. Furthermore, we established two new negative datasets and analyzed the impact of using them for training and testing. It was our aim to attach an order of importance to the parts involved in ML for pre-miRNA detection, but instead we found that all parts are intricately connected and their contributions cannot be easily untangled leading us to suggest that when attempting ML-based pre-miRNA detection many scenarios need to be explored.


Agronomy ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 2078
Author(s):  
Leandro Sosa ◽  
Ana Justel ◽  
Íñigo Molina

Hailstorms usually result in total crop loss. After a hailstorm, the affected field is inspected by an insurance claims adjuster to assess yield loss. Assessment accuracy depends largely on in situ detection of homogeneous damage sectors within the field, using visual techniques. This paper presents an algorithm for the automatic detection of homogeneous hail damage through the application of unsupervised machine learning techniques to vegetation indices calculated from remote sensing data. Five microwave and five spectral indices were evaluated before and after a hailstorm in zones with different degrees of damage. Dual Polarization SAR Vegetation Index and Normalized Pigment Chlorophyll Ratio Index were the most sensitive to hail-induced changes. The time series and rates of change of these indices were used as input variables in the K-means method for clustering pixels into homogeneous damage zones. Validation of the algorithm with data from 91 soybean, wheat, and corn plots showed that in 87.01% of cases there was significant evidence of differences in average damage between zones determined by the algorithm within the plot. Thus, the algorithm presented in this paper allowed efficient detection of homogeneous hail damage zones, which is expected to improve accuracy and transparency in the characterization of hailstorm events.


2021 ◽  
Vol 13 (12) ◽  
pp. 2352
Author(s):  
Liying Geng ◽  
Tao Che ◽  
Mingguo Ma ◽  
Junlei Tan ◽  
Haibo Wang

The accurate and timely estimation of regional crop biomass at different growth stages is of great importance in guiding crop management decision making. The recent availability of long time series of remote sensing data offers opportunities for crop monitoring. In this paper, four machine learning models, namely random forest (RF), support vector machine (SVM), artificial neural network (ANN), and extreme gradient boosting (XGBoost) were adopted to estimate the seasonal corn biomass based on field observation data and moderate resolution imaging spectroradiometer (MODIS) reflectance data from 2012 to 2019 in the middle reaches of the Heihe River basin, China. Nine variables were selected with the forward feature selection approach from among twenty-seven variables potentially influencing corn biomass: soil-adjusted total vegetation index (SATVI), green ratio vegetation index (GRVI), Nadir_B7 (2105–2155 nm), Nadir_B6 (1628–1652 nm), land surface water index (LSWI), normalized difference vegetation index (NDVI), Nadir_B4 (545–565 nm), and Nadir_B3 (459–479 nm). The results indicated that the corn biomass was suitably estimated (the coefficient of determination (R2) was between 0.72 and 0.78) with the four machine learning models. The XGBoost model performed better than the other three models (R2 = 0.78, root mean squared error (RMSE) = 2.86 t/ha and mean absolute error (MAE) = 1.86 t/ha). Moreover, the RF model was an effective method (R2 = 0.77, RMSE = 2.91 t/ha and MAE = 1.91 t/ha), with a performance comparable to that of the XGBoost model. This study provides a reference for estimating crop biomass from MOD43A4 datasets. In addition, the research demonstrates the potential of machine learning techniques to achieve a relatively accurate estimation of daily corn biomass at a large scale.


Author(s):  
Fahad Kamran ◽  
Kathryn Harrold ◽  
Jonathan Zwier ◽  
Wendy Carender ◽  
Tian Bao ◽  
...  

Abstract Background Recently, machine learning techniques have been applied to data collected from inertial measurement units to automatically assess balance, but rely on hand-engineered features. We explore the utility of machine learning to automatically extract important features from inertial measurement unit data for balance assessment. Findings Ten participants with balance concerns performed multiple balance exercises in a laboratory setting while wearing an inertial measurement unit on their lower back. Physical therapists watched video recordings of participants performing the exercises and rated balance on a 5-point scale. We trained machine learning models using different representations of the unprocessed inertial measurement unit data to estimate physical therapist ratings. On a held-out test set, we compared these learned models to one another, to participants’ self-assessments of balance, and to models trained using hand-engineered features. Utilizing the unprocessed kinematic data from the inertial measurement unit provided significant improvements over both self-assessments and models using hand-engineered features (AUROC of 0.806 vs. 0.768, 0.665). Conclusions Unprocessed data from an inertial measurement unit used as input to a machine learning model produced accurate estimates of balance performance. The ability to learn from unprocessed data presents a potentially generalizable approach for assessing balance without the need for labor-intensive feature engineering, while maintaining comparable model performance.


Author(s):  
K Sooknunan ◽  
M Lochner ◽  
Bruce A Bassett ◽  
H V Peiris ◽  
R Fender ◽  
...  

Abstract With the advent of powerful telescopes such as the Square Kilometer Array and the Vera C. Rubin Observatory, we are entering an era of multiwavelength transient astronomy that will lead to a dramatic increase in data volume. Machine learning techniques are well suited to address this data challenge and rapidly classify newly detected transients. We present a multiwavelength classification algorithm consisting of three steps: (1) interpolation and augmentation of the data using Gaussian processes; (2) feature extraction using wavelets; (3) classification with random forests. Augmentation provides improved performance at test time by balancing the classes and adding diversity into the training set. In the first application of machine learning to the classification of real radio transient data, we apply our technique to the Green Bank Interferometer and other radio light curves. We find we are able to accurately classify most of the eleven classes of radio variables and transients after just eight hours of observations, achieving an overall test accuracy of 78%. We fully investigate the impact of the small sample size of 82 publicly available light curves and use data augmentation techniques to mitigate the effect. We also show that on a significantly larger simulated representative training set that the algorithm achieves an overall accuracy of 97%, illustrating that the method is likely to provide excellent performance on future surveys. Finally, we demonstrate the effectiveness of simultaneous multiwavelength observations by showing how incorporating just one optical data point into the analysis improves the accuracy of the worst performing class by 19%.


2021 ◽  
Vol 208 ◽  
pp. 104880
Author(s):  
Sami Khanal ◽  
Andrew Klopfenstein ◽  
Kushal KC ◽  
Venkatesh Ramarao ◽  
John Fulton ◽  
...  

2021 ◽  
Vol 10 (7) ◽  
pp. 436
Author(s):  
Amerah Alghanim ◽  
Musfira Jilani ◽  
Michela Bertolotto ◽  
Gavin McArdle

Volunteered Geographic Information (VGI) is often collected by non-expert users. This raises concerns about the quality and veracity of such data. There has been much effort to understand and quantify the quality of VGI. Extrinsic measures which compare VGI to authoritative data sources such as National Mapping Agencies are common but the cost and slow update frequency of such data hinder the task. On the other hand, intrinsic measures which compare the data to heuristics or models built from the VGI data are becoming increasingly popular. Supervised machine learning techniques are particularly suitable for intrinsic measures of quality where they can infer and predict the properties of spatial data. In this article we are interested in assessing the quality of semantic information, such as the road type, associated with data in OpenStreetMap (OSM). We have developed a machine learning approach which utilises new intrinsic input features collected from the VGI dataset. Specifically, using our proposed novel approach we obtained an average classification accuracy of 84.12%. This result outperforms existing techniques on the same semantic inference task. The trustworthiness of the data used for developing and training machine learning models is important. To address this issue we have also developed a new measure for this using direct and indirect characteristics of OSM data such as its edit history along with an assessment of the users who contributed the data. An evaluation of the impact of data determined to be trustworthy within the machine learning model shows that the trusted data collected with the new approach improves the prediction accuracy of our machine learning technique. Specifically, our results demonstrate that the classification accuracy of our developed model is 87.75% when applied to a trusted dataset and 57.98% when applied to an untrusted dataset. Consequently, such results can be used to assess the quality of OSM and suggest improvements to the data set.


2014 ◽  
Vol 36 (2) ◽  
pp. 185 ◽  
Author(s):  
Fang Chen ◽  
Keith T. Weber

Changes in vegetation are affected by many climatic factors and have been successfully monitored through satellite remote sensing over the past 20 years. In this study, the Normalised Difference Vegetation Index (NDVI), derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) onboard the Terra satellite, was selected as an indicator of change in vegetation. Monthly MODIS composite NDVI at a 1-km resolution was acquired throughout the 2004–09 growing seasons (i.e. April–September). Data describing daily precipitation and temperature, primary factors affecting vegetation growth in the semiarid rangelands of Idaho, were derived from the Surface Observation Gridding System and local weather station datasets. Inter-annual and seasonal fluctuations of precipitation and temperature were analysed and temporal relationships between monthly NDVI, precipitation and temperature were examined. Results indicated NDVI values observed in June and July were strongly correlated with accumulated precipitation (R2 >0.75), while NDVI values observed early in the growing season (May) as well as late in the growing season (August and September) were only moderately related with accumulated precipitation (R2 ≥0.45). The role of ambient temperature was also apparent, especially early in the growing season. Specifically, early growing-season temperatures appeared to significantly affect plant phenology and, consequently, correlations between NDVI and accumulated precipitation. It is concluded that precipitation during the growing season is a better predictor of NDVI than temperature but is interrelated with influences of temperature in parts of the growing season.


Materials ◽  
2021 ◽  
Vol 14 (21) ◽  
pp. 6713
Author(s):  
Omid Khalaj ◽  
Moslem Ghobadi ◽  
Ehsan Saebnoori ◽  
Alireza Zarezadeh ◽  
Mohammadreza Shishesaz ◽  
...  

Oxide Precipitation-Hardened (OPH) alloys are a new generation of Oxide Dispersion-Strengthened (ODS) alloys recently developed by the authors. The mechanical properties of this group of alloys are significantly influenced by the chemical composition and appropriate heat treatment (HT). The main steps in producing OPH alloys consist of mechanical alloying (MA) and consolidation, followed by hot rolling. Toughness was obtained from standard tensile test results for different variants of OPH alloy to understand their mechanical properties. Three machine learning techniques were developed using experimental data to simulate different outcomes. The effectivity of the impact of each parameter on the toughness of OPH alloys is discussed. By using the experimental results performed by the authors, the composition of OPH alloys (Al, Mo, Fe, Cr, Ta, Y, and O), HT conditions, and mechanical alloying (MA) were used to train the models as inputs and toughness was set as the output. The results demonstrated that all three models are suitable for predicting the toughness of OPH alloys, and the models fulfilled all the desired requirements. However, several criteria validated the fact that the adaptive neuro-fuzzy inference systems (ANFIS) model results in better conditions and has a better ability to simulate. The mean square error (MSE) for artificial neural networks (ANN), ANFIS, and support vector regression (SVR) models was 459.22, 0.0418, and 651.68 respectively. After performing the sensitivity analysis (SA) an optimized ANFIS model was achieved with a MSE value of 0.003 and demonstrated that HT temperature is the most significant of these parameters, and this acts as a critical rule in training the data sets.


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