Faculty Opinions recommendation of Proximity biotinylation provides insight into the molecular composition of focal adhesions at the nanometer scale.

Author(s):  
Andrew Gilmore
2016 ◽  
Vol 9 (432) ◽  
pp. rs4-rs4 ◽  
Author(s):  
J.-M. Dong ◽  
F. P.-L. Tay ◽  
H. L.-F. Swa ◽  
J. Gunaratne ◽  
T. Leung ◽  
...  

2021 ◽  
Author(s):  
Koichi Fukuda ◽  
Fan Lu ◽  
Jun Qin

AbstractRas suppressor-1 (Rsu-1) is a leucine-rich repeat (LRR)-containing protein that is crucial for regulating fundamental cell adhesion processes and tumor development. Rsu-1 interacts with a zinc-finger type multi LIM domain-containing adaptor protein PINCH-1 involved in the integrin-mediated consensus adhesome but not with highly homologous isoform PINCH-2. However, the structural basis for such specific interaction and regulatory mechanism remains unclear. Here, we determined the crystal structures of Rsu-1 and its complex with the PINCH-1 LIM4-5 domains. Rsu-1 displays an arc-shaped solenoid architecture with eight LRRs shielded by the N- and C-terminal capping modules. We show that a large conserved concave surface of the Rsu-1 LRR domain recognizes the PINCH-1 LIM5 domain, and that the C-terminal non-LIM region of PINCH-2 but not PINCH-1 sterically disfavors the Rsu-1 binding. We further show that Rsu-1 can be assembled, via PINCH-1-binding, into a tight hetero-pentamer complex comprising Rsu-1, PINCH-1, ILK, Parvin, and Kindlin-2 that constitute a major consensus integrin adhesome crucial for focal adhesion assembly. Consistently, our mutagenesis and cell biological data consolidate the significance of the Rsu-1/PINCH-1 interaction in focal adhesion assembly and cell spreading. Our results provide a crucial molecular insight into Rsu-1-mediated cell adhesion with implication on how it may regulate tumorigenic growth.


Coatings ◽  
2021 ◽  
Vol 11 (9) ◽  
pp. 1024
Author(s):  
Jaebum Park ◽  
Michael J. McShane

Nanoscale coatings are attractive for managing the biological/material interface as well as for transport control in medical device applications. Construction of biologically derived and mimicking polyelectrolyte multilayers (BioPEMs) and their chemically crosslinked derivatives was evaluated at the nanometer scale and the glucose mass transfer properties were characterized in a physiological environment. Glucose diffusivity through all the BioPEMs was found to be three to four orders of magnitude lower than that of bare substrate. In contrast, permeation rates (dC/dt) were significantly higher than when compared to films comprising the same number of bilayers of synthetic materials—poly(acrylic acid)/poly(allylamine hydrochloride). Crosslinked BioPEMs exhibited decreased diffusivity of glucose up to 51% compared to native BioPEMs. These findings provide fundamental insight into the transport properties of BioPEM coatings that may be useful in maximizing biomimetic properties while also controlling permeation of small molecules in applications such as sensors, filtration, and drug delivery systems.


EvoDevo ◽  
2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Jennyfer M. Mitchell ◽  
Scott A. Nichols

Abstract The integrity and organization of animal tissues depend upon specialized protein complexes that mediate adhesion between cells with each other (cadherin-based adherens junctions), and with the extracellular matrix (integrin-based focal adhesions). Reconstructing how and when these cell junctions evolved is central to understanding early tissue evolution in animals. We examined focal adhesion protein homologs in tissues of the freshwater sponge, Ephydatia muelleri (phylum Porifera; class Demospongiae). Our principal findings are that (1) sponge focal adhesion homologs (integrin, talin, focal adhesion kinase, etc.) co-precipitate as a complex, separate from adherens junction proteins; (2) that actin-based structures resembling focal adhesions form at the cell–substrate interface, and their abundance is dynamically regulated in response to fluid shear; (3) focal adhesion proteins localize to both cell–cell and cell–extracellular matrix adhesions, and; (4) the adherens junction protein β-catenin is co-distributed with focal adhesion proteins at cell–cell junctions everywhere except the choanoderm, and at novel junctions between cells with spicules, and between cells with environmental bacteria. These results clarify the diversity, distribution and molecular composition of cell junctions in tissues of E. muelleri, but raise new questions about their functional properties and ancestry.


Author(s):  
Joseph Klingfus ◽  
Kevin Burcham ◽  
Martin Rasche ◽  
Thomas Borchert ◽  
Niklas Damnik

Abstract Chipscanning is the high-resolution, large-area, SEM image capture of complete (or partial) IC devices. Images are acquired sequentially in matrix-array fashion over an area of interest and large image mosaics are created from the collection of smaller images. Chipscanning is of keen interest to those involved with component obsolescence, design verification, anti-counterfeiting, etc. Chipscanning, and subsequent processing of the images, can also be used to reverse engineer an IC device. The reverse engineering process can be broken down into three main tasks; sample preparation, data collection, and data processing. We present practical insight into the data collection and data processing tasks and discuss an instrument platform uniquely suited for imaging such devices.


2016 ◽  
Vol 212 (5) ◽  
pp. 577-590 ◽  
Author(s):  
Candia M. Kenific ◽  
Samantha J. Stehbens ◽  
Juliet Goldsmith ◽  
Andrew M. Leidal ◽  
Nathalie Faure ◽  
...  

Autophagy is a catabolic pathway involving the sequestration of cellular contents into a double-membrane vesicle, the autophagosome. Although recent studies have demonstrated that autophagy supports cell migration, the underlying mechanisms remain unknown. Using live-cell imaging, we uncover that autophagy promotes optimal migratory rate and facilitates the dynamic assembly and disassembly of cell-matrix focal adhesions (FAs), which is essential for efficient motility. Additionally, our studies reveal that autophagosomes associate with FAs primarily during disassembly, suggesting autophagy locally facilitates the destabilization of cell-matrix contact sites. Furthermore, we identify the selective autophagy cargo receptor neighbor of BRCA1 (NBR1) as a key mediator of autophagy-dependent FA remodeling. NBR1 depletion impairs FA turnover and decreases targeting of autophagosomes to FAs, whereas ectopic expression of autophagy-competent, but not autophagy-defective, NBR1 enhances FA disassembly and reduces FA lifetime during migration. Our findings provide mechanistic insight into how autophagy promotes migration by revealing a requirement for NBR1-mediated selective autophagy in enabling FA disassembly in motile cells.


2000 ◽  
Vol 657 ◽  
Author(s):  
Mary W. Seto ◽  
Brian Dick ◽  
Michael J. Brett

ABSTRACTPorous thin films with helical microstructures were fabricated with the Glancing Angle Deposition technique. These films consisted of arrays of “microsprings” whose geometries could be engineered with nanometer scale control. Some of the mechanical properties of these helically structured films were studied with a nanoindentation technique. Several microscopic “springbed” films were tested over a range of forces using a spherical indenter tip. The geometries of the microsprings were varied, and a number of different materials were used to fabricate these films, which were typically a few micrometers thick. Slanted post arrays, resembling micro-cantilevers, were also subjected to nanoindentation tests. Results of initial experiments, theory, and simulations show that these microstructures behave in a manner analogous to macroscopic springs and cantilevers, and may offer some insight into how materials behave at the microscale.


2018 ◽  
Author(s):  
Bertille Bance ◽  
Shailaja Seetharaman ◽  
Cécile Leduc ◽  
Batiste Boëda ◽  
Sandrine Etienne-Manneville

AbstractMicrotubules play a crucial role in mesenchymal migration by controlling cell polarity and the turnover of cell adhesive structures on the extracellular matrix. The polarized functions of microtubules imply that microtubules are locally regulated. Here, we investigated the regulation and role of two major tubulin post-translational modifications, acetylation and detyrosination, which have been associated with stable microtubules. Using primary astrocytes in a wound healing assay, we show that these tubulin modifications are independently regulated during cell polarization and differently affect cell migration. In contrast to microtubule detyrosination, αTAT1-mediated microtubule acetylation increases in the vicinity of focal adhesions and promotes cell migration. We further demonstrate that αTAT1 increases focal adhesion turnover by promoting Rab6-positive vesicle fusion at focal adhesions. Our results highlight the specificity of microtubule post-translational modifications and bring new insight into the regulatory functions of tubulin acetylation.


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