scholarly journals DNA barcoding for species delimitation of the freshwater leech genus Glossiphonia from the Western Balkan (Hirudinea, Glossiphoniidae)

2021 ◽  
Vol 9 ◽  
Author(s):  
Milica Jovanović ◽  
Elisabeth Haring ◽  
Helmut Sattmann ◽  
Clemens Grosser ◽  
Vladimir Pesic
Keyword(s):  
Cytochrome C Oxidase ◽  
Species Identification ◽  
Species Delimitation ◽  
Morphological Analysis ◽  
Diverse Group ◽  
Mitochondrial Cytochrome ◽  
Aquatic Fauna ◽  
Freshwater Habitats ◽  
Molecular Dataset ◽  
Future Work

Glossiphoniid leeches are a diverse group and sometimes abundant elements of the aquatic fauna inhabiting various types of freshwater habitats. In this study, we sampled leeches of the genus Glossiphonia from the Western Balkan in order to test the suitability of the mitochondrial cytochrome c oxidase subunit 1 (COI) marker sequence for species delimitation. Morphological analysis revealed the presence of four taxa, G. complanata with two subspecies, G. c. complanata and G. c. maculosa, the latter an endemic of Ohrid Lake, G. nebulosa and endemic G. balcanica. In total, 29 new barcodes of Glossiphonia were sequenced in the course of this study and compared with the available molecular dataset of the latter genus from GenBank/BOLD databases. The applied ASAP distance-based species delimitation method for the analysed dataset revealed an interspecific threshold between 4-8% K2P distance as suitable for species identification purposes of the Western Balkan Glossiphonia species. Our study revealed that morphologically identified taxa as G. nebulosa and G. concolor each consists of more than one clearly different phylogenetic clade. This study contributes to a better knowledge of the taxonomy of glossiphoniid leeches and emphasises future work on the revision of this genus using a standard molecular COI marker in species identification.

Revision of the subgenus Phortica (sensu stricto) (Diptera, Drosophilidae) from East Asia, with assessment of species delimitation using DNA barcodes

Zootaxa ◽  
2019 ◽  
Vol 4678 (1) ◽  
pp. 1-75
Author(s):  
JIA HUANG ◽  
LU GONG ◽  
SHUN-CHERN TSAUR ◽  
LIN ZHU ◽  
KEYING AN ◽  
...  
Keyword(s):  
New Species ◽  
Cytochrome C Oxidase ◽  
Species Delimitation ◽  
Species Complex ◽  
Dna Barcode ◽  
Sensu Stricto ◽  
Coi Gene ◽  
Mitochondrial Cytochrome ◽  
Dna Barcodes ◽  
New Synonyms

A total of 50 (43 known and seven new) species in the subgenus Phortica (sensu stricto) were surveyed and (re)described from China: P. bicornuta (Chen & Toda, 1997); P. bipartita (Toda & Peng, 1992); P. biprotrusa (Chen & Toda, 1998); P. cardua (Okada, 1977); P. chi (Toda & Sidorenko, 1996); P. conifera (Okada, 1977); P. eparmata (Okada, 1977); P. eugamma (Toda & Peng, 1990); P. excrescentiosa (Toda & Peng, 1990); P. fangae (Máca, 1993); P. flexuosa (Zhang & Gan, 1986); P. foliata (Chen & Toda, 1997); P. gamma (Toda & Peng, 1990); P. gigas (Okada, 1977); P. glabtabula Chen & Gao, 2005; P. hainanensis (Chen & Toda, 1998); P. hongae (Máca, 1993); P. huazhii Cheng & Chen, 2008; P. iota (Toda & Sidorenko, 1996); P. jadete Zhu, Cao & Chen, 2018; P. kappa (Máca, 1977); P. lambda (Toda & Peng, 1990); P. latifoliacea Chen & Watabe, 2008; P. magna (Okada, 1960); P. okadai (Máca, 1977); P. omega (Okada, 1977); P. orientalis (Hendel, 1914); P. pangi Chen & Wen, 2005; P. paramagna (Okada, 1971); P. perforcipata (Máca & Lin, 1993); P. pi (Toda & Peng, 1990); P. protrusa (Zhang & Shi, 1997); P. pseudopi (Toda & Peng, 1990); P. pseudotau (Toda & Peng, 1990); P. psi (Zhang & Gan, 1986); P. rhagolobos Chen & Gao, 2008; P. saeta (Zhang & Gan, 1986); P. setitabula Chen & Gao, 2005; P. subradiata (Okada, 1977); P. tau (Toda & Peng, 1990); P. uncinata Chen & Gao, 2005; P. unipetala Chen & Wen, 2005; P. allomega Gong & Chen, sp. nov.; P. archikappa Gong & Chen, sp. nov.; P. dianzangensis Gong & Chen, sp. nov.; P. imbacilia Gong & Chen, sp. nov.; P. liukuni Gong & Chen, sp. nov.; P. tibeta Gong & Chen, sp. nov.; and P. xianfui Gong & Chen, sp. nov. In addition, seven new synonyms were recognized: P. acongruens (Zhang & Shi, 1997), syn. nov.; P. antillaria (Chen & Toda, 1997), syn. nov.; P. kukuanensis Máca, 2003, syn. nov.; P. linae (Máca & Chen, 1993), syn. nov.; P. shillongensis (Singh & Gupta, 1979), syn. nov.; P. takadai (Okada, 1977), syn. nov.; and P. watanabei (Máca & Lin, 1993), syn. nov. A key to all Asian species (except for the eparmata species complex) of this subgenus was provided. All currently available DNA barcode (partial mitochondrial cytochrome c oxidase subunit I (COI) gene) sequences of this subgenus (217 sequences of 54 species) are employed in a molecular analysis using different species delimitation methods. The results indicate that approximately 68.5% (37 of 54 spp.) of Phortica (s. str.) species could be clearly distinguished from closely related morphospecies or cryptic species. 

Cephalomalthinus simplicicornis (Wittmer, 1993) rev. stat. et comb. n.:  a resurrected soldier beetle (Coleoptera, Cantharidae) from Taiwan based on morphological and molecular data

Zootaxa ◽  
2019 ◽  
Vol 4619 (2) ◽  
pp. 297-310
Author(s):  
YUN HSIAO ◽  
CHENG-LUNG TSAI
Keyword(s):  
East Asia ◽  
Species Identification ◽  
Species Delimitation ◽  
Molecular Data ◽  
Morphological Data ◽  
New Combination ◽  
Diverse Group ◽  
Dna Barcodes ◽  
Species Status ◽  
Morphological And Molecular Data

The genus Cephalomalthinus Pic, 1921 is a diverse group of soldier beetles known from East Asia, with modifications on the male antennae, which are traditionally used for species delimitation. However, antennae are uniform in some Cephalomalthinus groups, thus making species identification difficult. In this study, both morphological and molecular data are applied to solve the generic classification and species status of Micropodabrus simplicicornis Wittmer, 1993, which was recently synonymized with Cephalomalthinus formosanus (Pic, 1910). We analyzed holotypes, multiple specimens and DNA barcodes to re-examine the validity of this synonymy. The results suggest that M. simplicicornis should be resurrected from the synonymy with C. formosanus, and a new combination, Cephalomalthinus simplicicornis (Wittmer, 1993) rev. stat. et comb. n., is proposed accordingly. The results highlight the value of multisource taxonomy and the discordance between molecular and morphological data. 

scholarly journals A genome-wide copper-sensitized screen identifies novel regulators of mitochondrial cytochrome c oxidase activity

2021 ◽  
Vol 296 ◽  
pp. 100485
Author(s):  
Natalie M. Garza ◽  
Aaron T. Griffin ◽  
Mohammad Zulkifli ◽  
Chenxi Qiu ◽  
Craig D. Kaplan ◽  
...  
Keyword(s):  
Cytochrome C ◽  
Cytochrome C Oxidase ◽  
Oxidase Activity ◽  
Mitochondrial Cytochrome ◽  
Genome Wide ◽  
A Genome ◽  
Mitochondrial Cytochrome C

Uranium inhibits mammalian mitochondrial cytochrome c oxidase and ATP synthase

2021 ◽  
Vol 271 ◽  
pp. 116377
Author(s):  
Libing Yu ◽  
Wenjing Li ◽  
Jian Chu ◽  
Chun Chen ◽  
Xijian Li ◽  
...  
Keyword(s):  
Cytochrome C ◽  
Cytochrome C Oxidase ◽  
Atp Synthase ◽  
Mitochondrial Cytochrome ◽  
Mitochondrial Cytochrome C

scholarly journals Wine Experiences: A Review from a Multisensory Perspective

2021 ◽  
Vol 11 (10) ◽  
pp. 4488
Author(s):  
Raffaele Campo ◽  
Felipe Reinoso-Carvalho ◽  
Pierfelice Rosato
Keyword(s):  
Literature Review ◽  
Recent Literature ◽  
Multisensory Perception ◽  
Diverse Group ◽  
Consumer Perspective ◽  
Future Work ◽  
The Way

The existing multisensory literature suggests that the combination of the different human senses in a controlled fashion during food/drink experiences can provide more enjoyment to consumers. The present research reviews recent literature relating multisensory perception with wine experiences, focusing on the interaction of the five basic senses (taste, smell, vision, touch, and sound). This is mostly being assessed from a perceptual and behavioral consumer perspective. Here, the authors report different ways in which such interactions across these senses can affect the way a wine is experienced, prior to, during, and even after tasting. The authors finish this literature review by providing some insights in the context of wine and food pairing, while also generally reflecting on potential future work. These insights may be inspirational for a diverse group of organizations working with wine. Based on such multisensory approaches, it may be possible to bring unforeseen sensations to the different wine experiences, while at the same time stressing particular sensory and/or emotional attributes.

scholarly journals Freshwater Dothideomycetes

2020 ◽  
Author(s):  
Wei Dong ◽  
Bin Wang ◽  
Kevin D. Hyde ◽  
Eric H. C. McKenzie ◽  
Huzefa A. Raja ◽  
...  
Keyword(s):  
New Species ◽  
Woody Debris ◽  
Diverse Group ◽  
New Combinations ◽  
New Genera ◽  
Freshwater Habitats ◽  
Multigene Analyses

AbstractFreshwater Dothideomycetes are a highly diverse group of fungi, which are mostly saprobic in freshwater habitats worldwide. They are important decomposers of submerged woody debris and leaves in water. In this paper, we outline the genera of freshwater Dothideomycetes with notes and keys to species. Based on multigene analyses and morphology, we introduce nine new genera, viz. Aquimassariosphaeria, Aquatospora, Aquihelicascus, Fusiformiseptata, Neohelicascus, Neojahnula, Pseudojahnula, Purpureofaciens, Submersispora; 33 new species, viz. Acrocalymma bipolare, Aquimassariosphaeria kunmingensis, Aquatospora cylindrica, Aquihelicascus songkhlaensis, A. yunnanensis, Ascagilis submersa, A. thailandensis, Bambusicola aquatica, Caryospora submersa, Dictyocheirospora thailandica, Fusiformiseptata crocea, Helicosporium thailandense, Hongkongmyces aquaticus, Lentistoma aquaticum, Lentithecium kunmingense, Lindgomyces aquaticus, Longipedicellata aquatica, Neohelicascus submersus, Neohelicomyces dehongensis, N. thailandicus, Neohelicosporium submersum, Nigrograna aquatica, Occultibambusa kunmingensis, Parabambusicola aquatica, Pseudoasteromassaria aquatica, Pseudoastrosphaeriella aquatica, Pseudoxylomyces aquaticus, Purpureofaciens aquatica, Roussoella aquatica, Shrungabeeja aquatica, Submersispora variabilis, Tetraploa puzheheiensis, T. yunnanensis; 16 new combinations, viz. Aquimassariosphaeria typhicola, Aquihelicascus thalassioideus, Ascagilis guttulaspora, A. queenslandica, A. seychellensis, A. sunyatsenii, Ernakulamia xishuangbannaensis, Neohelicascus aquaticus, N. chiangraiensis, N. egyptiacus, N. elaterascus, N. gallicus, N. unilocularis, N. uniseptatus, Neojahnula australiensis, Pseudojahnula potamophila; 17 new geographical and habitat records, viz. Aliquandostipite khaoyaiensis, Aquastroma magniostiolata, Caryospora aquatica, C. quercus, Dendryphiella vinosa, Ernakulamia cochinensis, Fissuroma neoaggregatum, Helicotruncatum palmigenum, Jahnula rostrata, Neoroussoella bambusae, N. leucaenae, Occultibambusa pustula, Paramonodictys solitarius, Pleopunctum pseudoellipsoideum, Pseudocapulatispora longiappendiculata, Seriascoma didymosporum, Shrungabeeja vadirajensis and ten new collections from China and Thailand, viz. Amniculicola guttulata, Aquaphila albicans, Berkleasmium latisporum, Clohesyomyces aquaticus, Dictyocheirospora rotunda, Flabellascoma fusiforme, Pseudoastrosphaeriella bambusae, Pseudoxylomyces elegans, Tubeufia aquatica and T. cylindrothecia. Dendryphiella phitsanulokensis and Tubeufia roseohelicospora are synonymized with D. vinosa and T. tectonae, respectively. Six orders, 43 families and 145 genera which belong to freshwater Dothideomycetes are reviewed. Of these, 46 genera occur exclusively in freshwater habitats. A world map illustrates the distribution of freshwater Dothideomycetes.

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