scholarly journals Basic reproduction number estimation and forecasting of COVID-19: A case study of India, Brazil and Peru

2021 ◽  
Vol 0 (0) ◽  
pp. 0
Author(s):  
Nitu Kumari ◽  
Sumit Kumar ◽  
Sandeep Sharma ◽  
Fateh Singh ◽  
Rana Parshad
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Equilibrium Points ◽  
Real Data ◽  
Time Frame ◽  
Complete Analysis ◽  
Data Set ◽  
Definition Of ◽  
The Basic Reproduction Number

<p style='text-indent:20px;'>Since the start of COVID-19 pandemic, the definition of normal life has changed drastically. The number of cases of this pandemic is rising everyday across the globe. In this study, we propose a compartmental model, which considers the isolation factor of Coronavirus infected individuals. The model consists of five compartments: susceptible (S), exposed (E), Infected (I), Isolated (L) and recovered (R). We have estimated the parameters of the model system and the expression of the basic reproduction number <inline-formula><tex-math id="M1">\begin{document}$ R_0 $\end{document}</tex-math></inline-formula> using real data set. The exact value of the basic reproduction number is computed for India, Brazil and Peru. The local and global stability analysis of disease-free equilibrium and endemic equilibrium points is carried out. The forecasting of the pandemic is done using real data. It has been observed that to understand the pandemic the time frame has to be divided into small intervals as the parameters of the pandemic are changing with time. Within a time frame of approximately four months (i.e. from July to October 2020), the transmission rate of India has been reduced by approximately 84%. Whereas the transmission rate in Brazil and Peru has increased by 79% and 45% respectively. The sensitivity of various parameters involved in the model has been analyzed. We have presented a complete analysis to check the existence of backward bifurcation.</p>

scholarly journals Mathematical analysis of a measles transmission dynamics model in Bangladesh with double dose vaccination

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Md Abdul Kuddus ◽  
M. Mohiuddin ◽  
Azizur Rahman
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Equilibrium Points ◽  
Rank Correlation ◽  
Dynamical Analysis ◽  
Model Parameters ◽  
Progression Rate ◽  
Double Dose ◽  
The Basic Reproduction Number

AbstractAlthough the availability of the measles vaccine, it is still epidemic in many countries globally, including Bangladesh. Eradication of measles needs to keep the basic reproduction number less than one $$(\mathrm{i}.\mathrm{e}. \, \, {\mathrm{R}}_{0}<1)$$ ( i . e . R 0 < 1 ) . This paper investigates a modified (SVEIR) measles compartmental model with double dose vaccination in Bangladesh to simulate the measles prevalence. We perform a dynamical analysis of the resulting system and find that the model contains two equilibrium points: a disease-free equilibrium and an endemic equilibrium. The disease will be died out if the basic reproduction number is less than one $$(\mathrm{i}.\mathrm{e}. \, \, {\mathrm{ R}}_{0}<1)$$ ( i . e . R 0 < 1 ) , and if greater than one $$(\mathrm{i}.\mathrm{e}. \, \, {\mathrm{R}}_{0}>1)$$ ( i . e . R 0 > 1 ) epidemic occurs. While using the Routh-Hurwitz criteria, the equilibria are found to be locally asymptotically stable under the former condition on $${\mathrm{R}}_{0}$$ R 0 . The partial rank correlation coefficients (PRCCs), a global sensitivity analysis method is used to compute $${\mathrm{R}}_{0}$$ R 0 and measles prevalence $$\left({\mathrm{I}}^{*}\right)$$ I ∗ with respect to the estimated and fitted model parameters. We found that the transmission rate $$(\upbeta )$$ ( β ) had the most significant influence on measles prevalence. Numerical simulations were carried out to commissions our analytical outcomes. These findings show that how progression rate, transmission rate and double dose vaccination rate affect the dynamics of measles prevalence. The information that we generate from this study may help government and public health professionals in making strategies to deal with the omissions of a measles outbreak and thus control and prevent an epidemic in Bangladesh.

scholarly journals Analysis of the SARS-CoV-2 Outbreak in Northern Cyprus using a Mathematical Model

2020 ◽  
Author(s):  
Tamer Sanlidag ◽  
Nazife Sultanoglu ◽  
Bilgen Kaymakamzade ◽  
Evren Hincal ◽  
Murat Sayan ◽  
...  
Keyword(s):  
Mathematical Model ◽  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Real Data ◽  
Northern Cyprus ◽  
The Stability ◽  
Disease Free ◽  
The Basic Reproduction Number

Abstract The present study studied the dynamics of SARS-CoV-2 in Northern-Cyprus (NC) by using real data and a designed mathematical model. The model consisted of two equilibrium points, which were disease-free and epidemic. The stability of the equilibrium points was determined by the magnitude of the basic reproduction number (𝑹𝟎). If 𝑹𝟎 < 1, the disease eventually disappears, if 𝑹𝟎 ≥ 1, the presence of an epidemic is stated. 𝑹𝟎 has been calculated patient zero, with a range of 2.38 to 0.65. Currently, the 𝑹𝟎 for NC was found to be 0.65, indicating that NC is free from the SARS-CoV-2 epidemic.

scholarly journals Analysis of the SARS-CoV-2 Outbreak in Northern Cyprus using a Mathematical Model

2020 ◽  
Author(s):  
Tamer Sanlidag ◽  
Nazife Sultanoglu ◽  
Bilgen Kaymakamzade ◽  
Evren Hincal ◽  
Murat Sayan ◽  
...  
Keyword(s):  
Mathematical Model ◽  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Real Data ◽  
Northern Cyprus ◽  
The Stability ◽  
Disease Free ◽  
The Basic Reproduction Number

Abstract The present study studied the dynamics of SARS-CoV-2 in Northern-Cyprus (NC) by using real data and a designed mathematical model. The model consisted of two equilibrium points, which were disease-free and epidemic. The stability of the equilibrium points was determined by the magnitude of the basic reproduction number (𝑹𝟎). If 𝑹𝟎 < 1, the disease eventually disappears, if 𝑹𝟎 ≥ 1, the presence of an epidemic is stated. 𝑹𝟎 has been calculated patient zero, with a range of 2.38 to 0.65. Currently, the 𝑹𝟎 for NC was found to be 0.65, indicating that NC is free from the SARS-CoV-2epidemic.

scholarly journals Fractional SIR-Model for Estimating Transmission Dynamics of COVID-19 in India

J ◽  
2021 ◽  
Vol 4 (2) ◽  
pp. 86-100
Author(s):  
Nita H. Shah ◽  
Ankush H. Suthar ◽  
Ekta N. Jayswal ◽  
Ankit Sikarwar
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Sir Model ◽  
Time Dependent ◽  
Contact Rate ◽  
Distribution Maps ◽  
Fundamental Parameters ◽  
Different Order ◽  
The Basic Reproduction Number

In this article, a time-dependent susceptible-infected-recovered (SIR) model is constructed to investigate the transmission rate of COVID-19 in various regions of India. The model included the fundamental parameters on which the transmission rate of the infection is dependent, like the population density, contact rate, recovery rate, and intensity of the infection in the respective region. Looking at the great diversity in different geographic locations in India, we determined to calculate the basic reproduction number for all Indian districts based on the COVID-19 data till 7 July 2020. By preparing district-wise spatial distribution maps with the help of ArcGIS 10.2, the model was employed to show the effect of complete lockdown on the transmission rate of the COVID-19 infection in Indian districts. Moreover, with the model's transformation to the fractional ordered dynamical system, we found that the nature of the proposed SIR model is different for the different order of the systems. The sensitivity analysis of the basic reproduction number is done graphically which forecasts the change in the transmission rate of COVID-19 infection with change in different parameters. In the numerical simulation section, oscillations and variations in the model compartments are shown for two different situations, with and without lockdown.

scholarly journals On an SEIR Epidemic Model with Vaccination of Newborns and Periodic Impulsive Vaccination with Eventual On-Line Adapted Vaccination Strategies to the Varying Levels of the Susceptible Subpopulation

2020 ◽  
Vol 10 (22) ◽  
pp. 8296 ◽  
Author(s):  
Malen Etxeberria-Etxaniz ◽  
Santiago Alonso-Quesada ◽  
Manuel De la Sen
Keyword(s):  
Equilibrium Point ◽  
Basic Reproduction Number ◽  
Epidemic Model ◽  
Disease Transmission ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Endemic Equilibrium ◽  
Impulsive Vaccination ◽  
Disease Free ◽  
The Basic Reproduction Number

This paper investigates a susceptible-exposed-infectious-recovered (SEIR) epidemic model with demography under two vaccination effort strategies. Firstly, the model is investigated under vaccination of newborns, which is fact in a direct action on the recruitment level of the model. Secondly, it is investigated under a periodic impulsive vaccination on the susceptible in the sense that the vaccination impulses are concentrated in practice in very short time intervals around a set of impulsive time instants subject to constant inter-vaccination periods. Both strategies can be adapted, if desired, to the time-varying levels of susceptible in the sense that the control efforts be increased as those susceptible levels increase. The model is discussed in terms of suitable properties like the positivity of the solutions, the existence and allocation of equilibrium points, and stability concerns related to the values of the basic reproduction number. It is proven that the basic reproduction number lies below unity, so that the disease-free equilibrium point is asymptotically stable for larger values of the disease transmission rates under vaccination controls compared to the case of absence of vaccination. It is also proven that the endemic equilibrium point is not reachable if the disease-free one is stable and that the disease-free equilibrium point is unstable if the reproduction number exceeds unity while the endemic equilibrium point is stable. Several numerical results are investigated for both vaccination rules with the option of adapting through ime the corresponding efforts to the levels of susceptibility. Such simulation examples are performed under parameterizations related to the current SARS-COVID 19 pandemic.

The impact of media coverage with a piecewise transmission rate in the spread of diseases

2016 ◽  
Vol 10 (01) ◽  
pp. 1750003
Author(s):  
Maoxing Liu ◽  
Lixia Zuo
Keyword(s):  
Basic Reproduction Number ◽  
Media Coverage ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Three Dimensional ◽  
Asymptotically Stable ◽  
Globally Asymptotically Stable ◽  
Contact Transmission ◽  
The Impact ◽  
The Basic Reproduction Number

A three-dimensional compartmental model with media coverage is proposed to describe the real characteristics of its impact in the spread of infectious diseases in a given region. A piecewise continuous transmission rate is introduced to describe that media coverage exhibits its effect only when the number of the infected exceeds a certain critical level. Further, it is assumed that the impact of media coverage on the contact transmission is described by an exponential decreasing factor. Stability analysis of the model shows that the disease-free equilibrium is globally asymptotically stable if the basic reproduction number is less than unity. On the other hand, when the basic reproduction number is greater than unity and media coverage impact is sufficiently small, a unique endemic equilibrium exists, which is globally asymptotically stable.

scholarly journals Analysis of the Model on the Effect of Seasonal Factors on Malaria Transmission Dynamics

2020 ◽  
Vol 2020 ◽  
pp. 1-19
Author(s):  
Victor Yiga ◽  
Hasifa Nampala ◽  
Julius Tumwiine
Keyword(s):  
Malaria Transmission ◽  
Basic Reproduction Number ◽  
Deterministic Model ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Current Control ◽  
Transmission Dynamics ◽  
Mosquito Vector ◽  
The Impact ◽  
The Basic Reproduction Number

Malaria is one of the world’s most prevalent epidemics. Current control and eradication efforts are being frustrated by rapid changes in climatic factors such as temperature and rainfall. This study is aimed at assessing the impact of temperature and rainfall abundance on the intensity of malaria transmission. A human host-mosquito vector deterministic model which incorporates temperature and rainfall dependent parameters is formulated. The model is analysed for steady states and their stability. The basic reproduction number is obtained using the next-generation method. It was established that the mosquito population depends on a threshold value θ , defined as the number of mosquitoes produced by a female Anopheles mosquito throughout its lifetime, which is governed by temperature and rainfall. The conditions for the stability of the equilibrium points are investigated, and it is shown that there exists a unique endemic equilibrium which is locally and globally asymptotically stable whenever the basic reproduction number exceeds unity. Numerical simulations show that both temperature and rainfall affect the transmission dynamics of malaria; however, temperature has more influence.

scholarly journals Model matematika penyebaran COVID-19 dengan penggunaan masker kesehatan dan karantina

2021 ◽  
Vol 2 (2) ◽  
pp. 68-79
Author(s):  
Muhammad Manaqib ◽  
Irma Fauziah ◽  
Eti Hartati
Keyword(s):  
Numerical Simulations ◽  
Equilibrium Point ◽  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Endemic Equilibrium ◽  
Reproduction Numbers ◽  
Geometric Picture ◽  
Disease Free ◽  
The Basic Reproduction Number

This study developed a model for the spread of COVID-19 disease using the SIR model which was added by a health mask and quarantine for infected individuals. The population is divided into six subpopulations, namely the subpopulation susceptible without a health mask, susceptible using a health mask, infected without using a health mask, infected using a health mask, quarantine for infected individuals, and the subpopulation to recover. The results obtained two equilibrium points, namely the disease-free equilibrium point and the endemic equilibrium point, and the basic reproduction number (R0). The existence of a disease-free equilibrium point is unconditional, whereas an endemic equilibrium point exists if the basic reproduction number is more than one. Stability analysis of the local asymptotically stable disease-free equilibrium point when the basic reproduction number is less than one. Furthermore, numerical simulations are carried out to provide a geometric picture related to the results that have been analyzed. The results of numerical simulations support the results of the analysis obtained. Finally, the sensitivity analysis of the basic reproduction numbers carried out obtained four parameters that dominantly affect the basic reproduction number, namely the rate of contact of susceptible individuals with infection, the rate of health mask use, the rate of health mask release, and the rate of quarantine for infected individuals.

scholarly journals Investigating the Impact of Social Awareness and Rapid Test on A COVID-19 Transmission Model

2021 ◽  
Vol 4 (1) ◽  
pp. 46-64
Author(s):  
Muhammad Afief Balya ◽  
Bunga Oktaviani Dewi ◽  
Faza Indah Lestari ◽  
Gayatri Ratu ◽  
Hanna Rosuliyana ◽  
...  
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Rapid Test ◽  
Social Awareness ◽  
Transmission Model ◽  
Media Campaign ◽  
Single Intervention ◽  
The Impact ◽  
The Basic Reproduction Number

In this article, we propose and analyze a mathematical model of COVID-19 transmission among a closed population, with social awareness and rapid test intervention as the control variables. For this, we have constructed the model using a compartmental system of the ordinary differential equations. Dynamical analysis regarding the existence and local stability of equilibrium points is conducted rigorously. Our analysis shows that COVID-19 will disappear from the population if the basic reproduction number is less than one, and persist if the basic reproduction number is greater than one. In addition, we have shown a trans-critical bifurcation phenomenon based on our proposed model when the basic reproduction number equals one. From the elasticity analysis, we have observed that rapid testing is more promising in reducing the basic reproduction number as compared to a media campaign to improve social awareness on COVID-19. Using the Pontryagin Maximum Principle (PMP), the characterization of our optimal control problem is derived analytically and solved numerically using the forward-backward iterative algorithm. Our cost-effectiveness analysis shows that using rapid test and media campaigns partially are the best intervention strategy to reduce the number of infected humans with the minimum cost of intervention. If the intervention is to be implemented as a single intervention, then using solely the rapid test is a more promising and low-cost option in reducing the number of infected individuals vis-a-vis a media campaign to increase social awareness as a single intervention.

scholarly journals The Effect of Seasonal Weather Variation on the Dynamics of the Plague Disease

2017 ◽  
Vol 2017 ◽  
pp. 1-25 ◽  
Author(s):  
Rigobert C. Ngeleja ◽  
Livingstone S. Luboobi ◽  
Yaw Nkansah-Gyekye
Keyword(s):  
Basic Reproduction Number ◽  
Disease Transmission ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Weather Conditions ◽  
Effective Control ◽  
Human Beings ◽  
Weather Variation ◽  
The Basic Reproduction Number ◽  
Seasonal Weather

Plague is a historic disease which is also known to be the most devastating disease that ever occurred in human history, caused by gram-negative bacteria known as Yersinia pestis. The disease is mostly affected by variations of weather conditions as it disturbs the normal behavior of main plague disease transmission agents, namely, human beings, rodents, fleas, and pathogens, in the environment. This in turn changes the way they interact with each other and ultimately leads to a periodic transmission of plague disease. In this paper, we formulate a periodic epidemic model system by incorporating seasonal transmission rate in order to study the effect of seasonal weather variation on the dynamics of plague disease. We compute the basic reproduction number of a proposed model. We then use numerical simulation to illustrate the effect of different weather dependent parameters on the basic reproduction number. We are able to deduce that infection rate, progression rates from primary forms of plague disease to more severe forms of plague disease, and the infectious flea abundance affect, to a large extent, the number of bubonic, septicemic, and pneumonic plague infective agents. We recommend that it is more reasonable to consider these factors that have been shown to have a significant effect on RT for effective control strategies.

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