MEG–MRI CO-REGISTRATION USING 3D GENERALIZED HOUGH TRANSFORM

2020 ◽  
Vol 32 (04) ◽  
pp. 2050028
Author(s):  
Sheng-Kai Lin ◽  
Rong-Chin Lo ◽  
Ren-Guey Lee

In this paper, we propose a method to use the three-dimensional (3D) generalized Hough transform (GHT) to co-register magnetoencephalography (MEG) and magnetic resonance imaging (MRI) of a brain automatically, whose results can be used to align MRI images and MEG data accurately and efficiently. Recently, many medical devices have been developed to study the neuronal activity in the human brain. MEG is a high-temporal-resolution measurement tool to study the physiological functions of brain nerves noninvasively; whereas the MRI of the scalp, skull, and cortex of the human brain is a high-spatial-resolution tool. The proposed method combines two tools for investigating the cognitive neuroscience between the human brain structure and weak magnetic fields from two different medical systems. An accurate and automatic registration method is necessitated to improve the brain analysis processes by combining multimodal data. The conventional GHT is a well-known method for detecting two-dimensional (2D) images or locating transformed planar shapes in 2D image processes. To further improve the 2D GHT, we extended it to a 3D GHT, which can co-register MEG and MRI data automatically and accurately. Some experimental results are included to demonstrate and evaluate the error and applicability of MEG–MRI co-registration.

2020 ◽  
Vol 32 (03) ◽  
pp. 2050024
Author(s):  
Sheng-Kai Lin ◽  
Rong-Chin Lo ◽  
Ren-Guey Lee

This study proposes an advanced co-registration method for an integrated high temporal resolution electroencephalography (EEG) and magnetoencephalography (MEG) data. The MEG has a higher accuracy for source localization techniques and spatial resolution by sensing magnetic fields generated by the entire brain using multichannel superconducting quantum interference devices, whereas EEG can record electrical activities from larger cortical surface to detect epilepsy. However, by integrating the two modality tools, we can accurately localize the epileptic activity compared to other non-invasive modalities. Integrating the two modality tools is challenging and important. This study proposes a new algorithm using an extended three-dimensional generalized Hough transform (3D GHT) to co-register the two modality data. The pre-process steps require the locations of EEG electrodes, MEG sensors, head-shape points of subjects and fiducial landmarks. The conventional GHT algorithm is a well-known method used for identifying or locating two 2D images. This study proposes a new co-registration method that extends the 2D GHT algorithm to a 3D GHT algorithm that can automatically co-register 3D image data. It is important to study the prospective brain source activity in bio-signal analysis. Furthermore, the study examines the registration accuracy evaluation by calculating the root mean square of the Euclidean distance of MEG–EEG co-registration data. Several experimental results are used to show that the proposed method for co-registering the two modality data is accurate and efficient. The results demonstrate that the proposed method is feasible, sufficiently automatic, and fast for investigating brain source images.


2020 ◽  
Vol 32 (03) ◽  
pp. 2050019
Author(s):  
Sheng-Kai Lin ◽  
Rong-Chin Lo ◽  
Ren-Guey Lee

In this study, we propose a new automatic co-registration method for the coordinate systems of magnetoencephalography (MEG) data and third dimension digitizer (3D DIG) data of a head using the 3D generalized Hough transform (GHT) during image processing. The technique is important for the research of brain functionalities; it can be done automatically, and quickly combines data from functional brain mapping tools like MEG and DIG, etc. MEG is a measurement instrument used to noninvasively analyze the physiological activity of neurons with high temporal resolution, but it lacks the head-shape of subjects and head with respect to the MEG sensors. 3D DIG can record head- shape, facial features, and anatomical markers in a 3D coordinate system in real time. Thus, combining the two modalities is beneficial in correlating the obtained brain data with physiological activity. According to much of the research, the GHT is useful for recognizing or locating two 2D images. However, the GHT algorithm can be extended to the 3D GHT to automatically co-register the 3D data. In this study, we use the 3D GHT to co-register three subject datasets with MEG and 3D DIG data, and evaluate the average distance errors between the proposed method and the MEG160 system. Some of the experimental results demonstrate the applicability of the proposed 3D GHT accurately and efficiently.


2020 ◽  
Vol 6 (3) ◽  
pp. 119-122
Author(s):  
Tolga-Can Çallar ◽  
Elmar Rueckert ◽  
Sven Böttger

AbstractComputer-aided medical systems, e.g. in the fields of medical robotics or image-based assistance, are continuously investigated to overcome human limitations concerning perception, memory or dexterity. A common requirement of such systems is the availability of a digital model describing the patient’s position and morphology during a procedure. Operational complexity and technical limitations of established 3D imaging methods leave clinical settings in need of a method for the fast acquisition of a three-dimensional body surface representation. For this purpose, we propose an unsupervised and efficient body registration pipeline based on the markerless elastic registration and completion of single-view stereo range images of the body surface with statistical parametric body shape templates. Initial results show a promising representative quality of the models generated through the registration process with submillimetric fitting accuracy and realistic surface morphology, indicating the general feasibility of our approach as an instant body registration method for automated medical and biometric applications.


Author(s):  
Hongzhang Zhu ◽  
Shi-Ting Feng ◽  
Xingqi Zhang ◽  
Zunfu Ke ◽  
Ruixi Zeng ◽  
...  

Background: Cutis Verticis Gyrata (CVG) is a rare skin disease caused by overgrowth of the scalp, presenting as cerebriform folds and wrinkles. CVG can be classified into two forms: primary (essential and non-essential) and secondary. The primary non-essential form is often associated with neurological and ophthalmological abnormalities, while the primary essential form occurs without associated comorbidities. Discussion: We report on a rare case of primary essential CVG with a 4-year history of normal-colored scalp skin mass in the parietal-occipital region without symptom in a 34-year-old male patient, retrospectively summarizing his pathological and Computer Tomography (CT) and magnetic resonance imaging (MRI) findings. The major clinical observations on the CT and MR sectional images include a thickened dermis and excessive growth of the scalp, forming the characteristic scalp folds. With the help of CT and MRI Three-dimensional (3D) reconstruction techniques, the characteristic skin changes could be displayed intuitively, providing more evidence for a diagnosis of CVG. At the 5-year followup, there were no obvious changes in the lesion. Conclusion: Based on our observations, we propose that not all patients with primary essential CVG need surgical intervention, and continuous clinical observation should be an appropriate therapy for those in stable condition.


Neurosurgery ◽  
2004 ◽  
Vol 55 (3) ◽  
pp. 519-531 ◽  
Author(s):  
Erol Veznedaroglu ◽  
David W. Andrews ◽  
Ronald P. Benitez ◽  
M. Beverly Downes ◽  
Maria Werner-Wasik ◽  
...  

Abstract OBJECTIVE: Despite the success of stereotactic radiosurgery, large inoperable arteriovenous malformations (AVMs) of 14 cm3 or more have remained largely refractory to stereotactic radiosurgery, with much lower obliteration rates. We review treatment of large AVMs either previously untreated or partially obliterated by embolization with fractionated stereotactic radiotherapy (FSR) regimens using a dedicated linear accelerator (LINAC). METHODS: Before treatment, all patients were discussed at a multidisciplinary radiosurgery board and found to be suitable for FSR. All patients were evaluated for pre-embolization. Those who had feeding pedicles amenable to glue embolization were treated. LINAC technique involved acquisition of a stereotactic angiogram in a relocatable frame that was also used for head localization during treatment. The FSR technique involved the use of six 7-Gy fractions delivered on alternate days over a 2-week period, and this was subsequently dropped to 5-Gy fractions after late complications in one of seven patients treated with 7-Gy fractions. Treatments were based exclusively on digitized biplanar stereotactic angiographic data. We used a Varian 600SR LINAC (Varian Medical Systems, Inc., Palo Alto, CA) and XKnife treatment planning software (Radionics, Inc., Burlington, MA). In most cases, one isocenter was used, and conformality was established by non-coplanar arc beam shaping and differential beam weighting. RESULTS: Thirty patients with large AVMs were treated between January 1995 and August 1998. Seven patients were treated with 42-Gy/7-Gy fractions, with one patient lost to follow-up and the remaining six with previous partial embolization. Twenty-three patients were treated with 30-Gy/5-Gy fractions, with two patients lost to follow-up and three who died as a result of unrelated causes. Of 18 evaluable patients, 8 had previous partial embolization. Mean AVM volumes at FSR treatment were 23.8 and 14.5 cm3, respectively, for the 42-Gy/7-Gy fraction and 30-Gy/5-Gy fraction groups. After embolization, 18 patients still had AVM niduses of 14 cm3 or more: 6 in the 7-Gy cohort and 12 in the 5-Gy cohort. For patients with at least 5-year follow-up, angiographically documented AVM obliteration rates were 83% for the 42-Gy/7-Gy fraction group, with a mean latency of 108 weeks (5 of 6 evaluable patients), and 22% for the 30-Gy/5-Gy fraction group, with an average latency of 191 weeks (4 of 18 evaluable patients) (P = 0.018). For AVMs that remained at 14 cm3 or more after embolization (5 of 6 patients), the obliteration rate remained 80% (4 of 5 patients) for the 7-Gy cohort and dropped to 9% for the 5-Gy cohort. A cumulative hazard plot revealed a 7.2-fold greater likelihood of obliteration with the 42-Gy/7-Gy fraction protocol (P = 0.0001), which increased to a 17-fold greater likelihood for postembolization AVMs of 14 cm3 or more (P = 0.003). CONCLUSION: FSR achieves obliteration for AVMs at a threshold dose, including large residual niduses after embolization. With significant treatment-related morbidities, further investigation warrants a need for better three-dimensional target definition with higher dose conformality.


Sensors ◽  
2021 ◽  
Vol 21 (8) ◽  
pp. 2670
Author(s):  
Thomas Quirin ◽  
Corentin Féry ◽  
Dorian Vogel ◽  
Céline Vergne ◽  
Mathieu Sarracanie ◽  
...  

This paper presents a tracking system using magnetometers, possibly integrable in a deep brain stimulation (DBS) electrode. DBS is a treatment for movement disorders where the position of the implant is of prime importance. Positioning challenges during the surgery could be addressed thanks to a magnetic tracking. The system proposed in this paper, complementary to existing procedures, has been designed to bridge preoperative clinical imaging with DBS surgery, allowing the surgeon to increase his/her control on the implantation trajectory. Here the magnetic source required for tracking consists of three coils, and is experimentally mapped. This mapping has been performed with an in-house three-dimensional magnetic camera. The system demonstrates how magnetometers integrated directly at the tip of a DBS electrode, might improve treatment by monitoring the position during and after the surgery. The three-dimensional operation without line of sight has been demonstrated using a reference obtained with magnetic resonance imaging (MRI) of a simplified brain model. We observed experimentally a mean absolute error of 1.35 mm and an Euclidean error of 3.07 mm. Several areas of improvement to target errors below 1 mm are also discussed.


2020 ◽  
Vol 11 (1) ◽  
pp. 301
Author(s):  
Sławomir Paśko ◽  
Wojciech Glinkowski

Scoliosis is a three-dimensional trunk and spinal deformity. Patient evaluation is essential for the decision-making process and determines the selection of specific and adequate treatment. The diagnosis requires a radiological evaluation that exposes patients to radiation. This exposure reaches hazardous levels when numerous, repetitive radiographic studies are required for diagnostics, monitoring, and treatment. Technological improvements in radiographic devices have significantly reduced radiation exposure, but the risk for patients remains. Optical three-dimensional surface topography (3D ST) measurement systems that use surface topography (ST) to screen, diagnose, and monitor scoliosis are safer alternatives to radiography. The study aimed to show that the combination of plain X-ray and 3D ST scans allows for an approximate presentation of the vertebral column spinous processes line in space to determine the shape of the spine’s deformity in scoliosis patients. Twelve patients diagnosed with scoliosis, aged 13.1 ± 4.5 years (range: 9 to 20 years) (mean: Cobb angle 17.8°, SD: ±9.5°) were enrolled in the study. Patients were diagnosed using full-spine X-ray and whole torso 3D ST. The novel three-dimensional assessment of the spinous process lines by merging 3D ST and X-ray data in patients with scoliosis was implemented. The method’s expected uncertainty is less than 5 mm, which is better than the norm for a standard measurement tool. The presented accuracy level is considered adequate; the proposed solution is accurate enough to monitor the changes in the shape of scoliosis’s spinous processes line. The proposed method allows for a relatively precise calculation of the spinous process lines based on a three-dimensional point cloud obtained with a four-directional, three-dimensional structured light diagnostic system and a single X-ray image. The method may help reduce patients’ total radiation exposure and avoid one X-ray in the sagittal projection if biplanar radiograms are required for reconstructing the three-dimensional line of the spinous processes line.


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