scholarly journals New insights into large-scale trends of apparent organic matter reactivity in marine sediments and patterns of benthic carbon transformation

2021 ◽  
Vol 18 (15) ◽  
pp. 4651-4679
Author(s):  
Felipe S. Freitas ◽  
Philip A. Pika ◽  
Sabine Kasten ◽  
Bo B. Jørgensen ◽  
Jens Rassmann ◽  
...  

Abstract. Constraining the mechanisms controlling organic matter (OM) reactivity and, thus, degradation, preservation, and burial in marine sediments across spatial and temporal scales is key to understanding carbon cycling in the past, present, and future. However, we still lack a detailed quantitative understanding of what controls OM reactivity in marine sediments and, consequently, a general framework that would allow model parametrization in data-poor areas. To fill this gap, we quantify apparent OM reactivity (i.e. OM degradation rate constants) by extracting reactive continuum model (RCM) parameters (a and v, which define the shape and scale of OM reactivity profiles, respectively) from observed benthic organic carbon and sulfate dynamics across 14 contrasting depositional settings distributed over five distinct benthic provinces. We further complement the newly derived parameter set with a compilation of 37 previously published RCM a and v estimates to explore large-scale trends in OM reactivity. Our analysis shows that the large-scale variability in apparent OM reactivity is largely driven by differences in parameter a (10−3–107) with a high frequency of values in the range 100–104 years. In contrast, and in broad agreement with previous findings, inversely determined v values fall within a narrow range (0.1–0.2). Results also show that the variability in parameter a and, thus, in apparent OM reactivity is a function of the whole depositional environment, rather than traditionally proposed, single environmental controls (e.g. water depth, sedimentation rate, OM fluxes). Thus, we caution against the simplifying use of a single environmental control for predicting apparent OM reactivity beyond a specific local environmental context (i.e. well-defined geographic scale). Additionally, model results indicate that, while OM fluxes exert a dominant control on depth-integrated OM degradation rates across most depositional environments, apparent OM reactivity becomes a dominant control in depositional environments that receive exceptionally reactive OM. Furthermore, model results show that apparent OM reactivity exerts a key control on the relative significance of OM degradation pathways, the redox zonation of the sediment, and rates of anaerobic oxidation of methane. In summary, our large-scale assessment (i) further supports the notion of apparent OM reactivity as a dynamic ecosystem property, (ii) consolidates the distributions of RCM parameters, and (iii) provides quantitative constraints on how OM reactivity governs benthic biogeochemical cycling and exchange. Therefore, it provides important global constraints on the most plausible range of RCM parameters a and v and largely alleviates the difficulty of determining OM reactivity in RCM by constraining it to only one variable, i.e. the parameter a. It thus represents an important advance for model parameterization in data-poor areas.

Minerals ◽  
2019 ◽  
Vol 9 (10) ◽  
pp. 624 ◽  
Author(s):  
Xi Xiao ◽  
Qian-Zhi Zhou ◽  
Shao-Ying Fu ◽  
Qian-Yong Liang ◽  
Xiang-Po Xu ◽  
...  

Fe and Mn oxides and (oxy)-hydroxides are the most abundant solid-phase electron acceptors in marine sediments, and dissimilatory Fe/Mn reduction usually links with the anaerobic oxidation of methane (AOM) and organic matter oxidation (OMO) in sediments. In this study, we report the results from subsurface marine sediments in the Dongsha hydrate-bearing area in the South China Sea. The petrological and geochemical signatures show that the Fe/Mn reduction mediated by AOM and OMO might occur in sediments above the sulfate-methane transition zone. X-ray diffraction and scanning electron microscopy analyses of sediments indicate that Fe(III)/Mn(IV)-oxides and authigenic carbonate minerals coexisted in the Fe/Mn reduction zone. The lower δ13C values of dissolved inorganic carbon, coupled with an evident increase in total inorganic carbon contents and a decrease in Ca2+ and Mg2+ concentrations indicate the onset of AOM in this zone, and the greater variation of PO43− and NH4+ concentrations in pore water suggests the higher OMO rates in subsurface sediments. Geochemical and mineralogical analyses suggest that the previously buried Fe(III)/Mn(IV) oxides might be activated and lead to the onset of Fe/Mn reduction induced by AOM and OMO. These findings may extend our understanding of the biogeochemical processes involved in Fe/Mn reduction in continental shelves with abundant methane, organic matter, and terrigenous metal oxides.


2004 ◽  
Vol 1 (2) ◽  
pp. 159-171 ◽  
Author(s):  
T. J. Battin ◽  
A. Wille ◽  
R. Psenner ◽  
A. Richter

Abstract. Glaciers are highly responsive to global warming and important agents of landscape heterogeneity. While it is well established that glacial ablation and snowmelt regulate stream discharge, linkage among streams and streamwater geochemistry, the controls of these factors on stream microbial biofilms remain insufficiently understood. We investigated glacial (metakryal, hypokryal), groundwater-fed (krenal) and snow-fed (rhithral) streams - all of them representative for alpine stream networks - and present evidence that these hydrologic and hydrogeochemical factors differentially affect sediment microbial biofilms. Average microbial biomass and bacterial carbon production were low in the glacial streams, whereas bacterial cell size, biomass, and carbon production were higher in the tributaries, most notably in the krenal stream. Whole-cell in situ fluorescence hybridization revealed reduced detection rates of the Eubacteria and higher abundance of α-Proteobacteria in the glacial stream, a pattern that most probably reflects the trophic status of this ecosystem. Our data suggest low flow during the onset of snowmelt and autumn as a short period (hot moment) of favorable environmental conditions with pulsed inputs of allochthonous nitrate and dissolved organic carbon, and with disproportionately high microbial growth. Tributaries are relatively more constant and favorable environments than kryal streams, and serve as possible sources of microbes and organic matter to the main glacial channel during periods (e.g., snowmelt) of elevated hydrologic linkage among streams. Ice and snow dynamics - and their impact on the amount and composition of dissolved organic matter - have a crucial impact on stream biofilms, and we thus need to consider microbes and critical hydrological episodes in future models of alpine stream communities.


2021 ◽  
Author(s):  
Felipe S. Freitas ◽  
Philip A. Pika ◽  
Sabine Kasten ◽  
Bo B. Jørgensen ◽  
Jens Rassmann ◽  
...  

Abstract. Constraining the mechanisms that control organic matter (OM) reactivity and, thus, degradation, preservation and burial in marine sediments across spatial and temporal scales is key to understanding carbon cycling in the past, present, and future. However, we still lack a quantitative understanding of what controls OM reactivity in marine sediments and, as a result, how to constrain it in global models. To fill this gap, we quantify apparent OM reactivity (i.e., model-derived estimates) by extracting reactive continuum model parameters (a and v) from observed benthic organic carbon and sulfate dynamics across 14 contrasting depositional settings distributed over five distinct benthic provinces. Our analysis shows that the large-scale range in apparent OM reactivity is largely driven by the wide variability in parameter a (10−3 


Polymers ◽  
2021 ◽  
Vol 13 (2) ◽  
pp. 295
Author(s):  
Stephanie E. Doyle ◽  
Lauren Henry ◽  
Ellen McGennisken ◽  
Carmine Onofrillo ◽  
Claudia Di Bella ◽  
...  

Degradable bone implants are designed to foster the complete regeneration of natural tissue after large-scale loss trauma. Polycaprolactone (PCL) and hydroxyapatite (HA) composites are promising scaffold materials with superior mechanical and osteoinductive properties compared to the single materials. However, producing three-dimensional (3D) structures with high HA content as well as tuneable degradability remains a challenge. To address this issue and create homogeneously distributed PCL-nanoHA (nHA) scaffolds with tuneable degradation rates through both PCL molecular weight and nHA concentration, we conducted a detailed characterisation and comparison of a range of PCL-nHA composites across three molecular weight PCLs (14, 45, and 80 kDa) and with nHA content up to 30% w/w. In general, the addition of nHA results in an increase of viscosity for the PCL-nHA composites but has little effect on their compressive modulus. Importantly, we observe that the addition of nHA increases the rate of degradation compared to PCL alone. We show that the 45 and 80 kDa PCL-nHA groups can be fabricated via indirect 3D printing and have homogenously distributed nHA even after fabrication. Finally, the cytocompatibility of the composite materials is evaluated for the 45 and 80 kDa groups, with the results showing no significant change in cell number compared to the control. In conclusion, our analyses unveil several features that are crucial for processing the composite material into a tissue engineered implant.


Author(s):  
Reilly M. Blocho ◽  
Richard W. Smith ◽  
Mark R. Noll

AbstractThe purpose of this study was to observe how the composition of organic matter (OM) and the extent of anoxia during deposition within the Marcellus Formation in New York varied by distance from the sediment source in eastern New York. Lipid biomarkers (n-alkanes and fatty acids) in the extractable organic component (bitumen) of the shale samples were analyzed, and proxies such as the average chain length (ACL), aquatic to terrestrial ratio (ATR) and carbon preference index (CPI) of n-alkanes were calculated. Fatty acids were relatively non-abundant due to the age of the shale bed, but n-alkane distributions revealed that the primary component of the OM was terrigenous plants. The presence of shorter n-alkane chain lengths in the samples indicated that there was also a minor component of phytoplankton and algal (marine) sourced OM. Whole rock analyses were also conducted, and cerium anomalies were calculated as a proxy for anoxia. All samples had a negative anomaly value, indicating anoxic conditions during deposition. Two samples, however, contained values close to zero and thus were determined to have suboxic conditions. Anoxia and total organic matter (TOM) did not show any spatial trends across the basin, which may be caused by varying depths within the basin during deposition. A correlation between nickel concentrations and TOM was observed and indicates that algae was the primary source of the marine OM, which supports the lipid biomarker analysis. It was determined that the kerogen type of the Marcellus Formation in New York State is type III, consistent with a methane-forming shale bed.


2009 ◽  
Vol 113 (3-4) ◽  
pp. 219-226 ◽  
Author(s):  
Christian Lønborg ◽  
Keith Davidson ◽  
Xosé A. Álvarez–Salgado ◽  
Axel E.J. Miller

2013 ◽  
Vol 113 ◽  
pp. 225-226 ◽  
Author(s):  
Patrick Meister ◽  
Bo Liu ◽  
Timothy G. Ferdelman ◽  
Bo Barker Jørgensen ◽  
Arzhang Khalili

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