scholarly journals Assessing performance and seasonal bias of pollen-based climate reconstructions in a perfect model world

2016 ◽  
Vol 12 (12) ◽  
pp. 2255-2270 ◽  
Author(s):  
Kira Rehfeld ◽  
Mathias Trachsel ◽  
Richard J. Telford ◽  
Thomas Laepple

Abstract. Reconstructions of summer, winter or annual mean temperatures based on the species composition of bio-indicators such as pollen, foraminifera or chironomids are routinely used in climate model–proxy data comparison studies. Most reconstruction algorithms exploit the joint distribution of modern spatial climate and species distribution for the development of the reconstructions. They rely on the space-for-time substitution and the specific assumption that environmental variables other than those reconstructed are not important or that their relationship with the reconstructed variable(s) should be the same in the past as in the modern spatial calibration dataset. Here we test the implications of this “correlative uniformitarianism” assumption on climate reconstructions in an ideal model world, in which climate and vegetation are known at all times. The alternate reality is a climate simulation of the last 6000 years with dynamic vegetation. Transient changes of plant functional types are considered as surrogate pollen counts and allow us to establish, apply and evaluate transfer functions in the modeled world. We find that in our model experiments the transfer function cross validation r2 is of limited use to identify reconstructible climate variables, as it only relies on the modern spatial climate–vegetation relationship. However, ordination approaches that assess the amount of fossil vegetation variance explained by the reconstructions are promising. We furthermore show that correlations between climate variables in the modern climate–vegetation relationship are systematically extended into the reconstructions. Summer temperatures, the most prominent driving variable for modeled vegetation change in the Northern Hemisphere, are accurately reconstructed. However, the amplitude of the model winter and mean annual temperature cooling between the mid-Holocene and present day is overestimated and similar to the summer trend in magnitude. This effect occurs because temporal changes of a dominant climate variable, such as summer temperatures in the model's Arctic, are imprinted on a less important variable, leading to reconstructions biased towards the dominant variable's trends. Our results, although based on a model vegetation that is inevitably simpler than reality, indicate that reconstructions of multiple climate variables based on modern spatial bio-indicator datasets should be treated with caution. Expert knowledge on the ecophysiological drivers of the proxies, as well as statistical methods that go beyond the cross validation on modern calibration datasets, are crucial to avoid misinterpretation.

2016 ◽  
Author(s):  
Kira Rehfeld ◽  
Mathias Trachsel ◽  
Richard Telford ◽  
Thomas Laepple

Abstract. Reconstructions of summer, winter or annual mean temperatures based on the species composition of bio-indicators such as pollen, foraminifera or chironomids are routinely used in climate model-proxy data comparison studies. Most reconstruction algorithms exploit the joint distribution of modern spatial climate and species distribution for the development of the reconstructions. They rely on the assumption of ''uniformitarianism'', which implies that environmental variables other than those reconstructed should not be important, or that their relationship with the reconstructed variable(s) should be the same in the past as in the modern spatial calibration dataset. Here we test the implications of uniformitarianism on such reconstructions in an ideal model world, in which climate and vegetation are known at all times. The alternate reality is a climate simulation of last 6000 years with dynamic vegetation. Transient changes of plant functional types are considered as surrogate pollen counts, and allow to establish, apply and evaluate transfer functions in the modeled world. We find that the transfer function cross-validation r2 is of limited use to identify reconstructible climate variables, as it only relies on the modern spatial climate/vegetation relationship. However, ordination approaches that assess the amount of fossil vegetation variance explained by the reconstructions are promising. We furthermore show that correlations between climate variables in the modern climate/vegetation relationship are systematically extended into the reconstructions. Summer temperatures, the most prominent driving variable for modelled vegetation change in the Northern Hemisphere, are accurately reconstructed. However, the amplitude of the winter and mean annual temperature cooling between the mid-Holocene and present day is overestimated, and similar to the summer trend in magnitude. This effect occurs, because temporal changes of a dominant climate variable, such as summer temperature, are imprinted on a less important variable, leading to reconstructions biased towards the dominant variable's trends. Our results indicate that reconstructions of multiple climate variables from the same bio-indicator dataset should be treated with caution. Expert knowledge on the eco-physiological drivers of the proxies, and statistical methods that go beyond the cross-validation on modern calibration datasets are crucial to avoid misinterpretation.


2015 ◽  
Vol 12 (20) ◽  
pp. 5899-5914 ◽  
Author(s):  
B. A. Hook ◽  
J. Halfar ◽  
Z. Gedalof ◽  
J. Bollmann ◽  
D. J. Schulze

Abstract. The recent discovery of well-preserved mummified wood buried within a subarctic kimberlite diamond mine prompted a paleoclimatic study of the early Eocene "hothouse" (ca. 53.3 Ma). At the time of kimberlite eruption, the Subarctic was warm and humid producing a temperate rainforest biome well north of the Arctic Circle. Previous studies have estimated that mean annual temperatures in this region were 4–20 °C in the early Eocene, using a variety of proxies including leaf margin analysis and stable isotopes (δ13C and δ18O) of fossil cellulose. Here, we examine stable isotopes of tree-ring cellulose at subannual- to annual-scale resolution, using the oldest viable cellulose found to date. We use mechanistic models and transfer functions to estimate earliest Eocene temperatures using mummified cellulose, which was well preserved in the kimberlite. Multiple samples of Piceoxylon wood within the kimberlite were crossdated by tree-ring width. Multiple proxies are used in combination to tease apart likely environmental factors influencing the tree physiology and growth in the unique extinct ecosystem of the Polar rainforest. Calculations of interannual variation in temperature over a multidecadal time-slice in the early Eocene are presented, with a mean annual temperature (MAT) estimate of 11.4 °C (1 σ = 1.8 °C) based on δ18O, which is 16 °C warmer than the current MAT of the area (−4.6 °C). Early Eocene atmospheric δ13C (δ13Catm) estimates were −5.5 (±0.7) ‰. Isotopic discrimination (Δ) and leaf intercellular pCO2 ratio (ci/ca) were similar to modern values (Δ = 18.7 ± 0.8 ‰; ci/ca = 0.63 ± 0.03 %), but intrinsic water use efficiency (Early Eocene iWUE = 211 ± 20 μmol mol−1) was over twice the level found in modern high-latitude trees. Dual-isotope spectral analysis suggests that multidecadal climate cycles somewhat similar to the modern Pacific Decadal Oscillation likely drove temperature and cloudiness trends on 20–30-year timescales, influencing photosynthetic productivity and tree growth patterns.


2018 ◽  
Vol 45 (4) ◽  
pp. 396-406 ◽  
Author(s):  
PAUL M. RADLEY ◽  
ROBERT A. DAVIS ◽  
RENÉ W.R.J. DEKKER ◽  
SHAUN W. MOLLOY ◽  
DAVID BLAKE ◽  
...  

SUMMARYAspects of species life histories may increase their susceptibility to climate change. Owing to their exclusive reliance on environmental sources of heat for incubation, megapodes may be especially vulnerable. We employed a trait-based vulnerability assessment to weigh their exposure to projected climate variables of increasing temperatures, fluctuating rainfall and sea level rise and their biological sensitivity and capacity to adapt. While all 21 species were predicted to experience at least a 2 °C increase in mean annual temperature, 12 to experience a moderate or greater fluctuation in rainfall and 16 to experience rising seas, the most vulnerable megapodes are intrinsically rare and range restricted. Species that employ microbial decomposition for incubation may have an adaptive advantage over those that do not and may be more resilient to climate change. The moderate microclimate necessary for mound incubation, however, may in some areas be threatened by anthropogenic habitat loss exacerbated by warmer and seasonally drier conditions. As with many avian species, little is known about the capacity of megapodes to adapt to a changing climate. We therefore recommend that future research efforts investigate megapode fecundity, gene flow and genetic connectivity at the population level to better determine their adaptive capacity.


2016 ◽  
Vol 12 (5) ◽  
pp. 1215-1223 ◽  
Author(s):  
Mathias Trachsel ◽  
Richard J. Telford

Abstract. Conventional cross validation schemes for assessing transfer-function performance assume that observations are independent. In spatially structured environments this assumption is violated, resulting in over-optimistic estimates of transfer-function performance. H-block cross validation, where all samples within h kilometres of the test samples are omitted, is a method for obtaining unbiased transfer-function performance estimates. In this study, we assess three methods for determining the optimal h. Using simulated data, we find that all three methods result in comparable values of h. Applying the three methods to published transfer functions, we find they yield similar values for h. Some transfer functions perform notably worse when h-block cross validation is used.


Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 840 ◽  
Author(s):  
Zeltiņš ◽  
Katrevičs ◽  
Gailis ◽  
Maaten ◽  
Desaine ◽  
...  

In Europe, numerous Norway spruce (Picea abies L. Karst.) provenance trials have been established and evaluated at a juvenile age. Still, information about the adaptation potential and long-term fitness of transferred seedlots in the Baltic Sea region is lacking. The aim of the study was to evaluate the adaptation capacity of provenances and assess the patterns of their long-term reaction to environmental transfer. We examined a 32-year-old provenance trial in the mild Baltic Sea coastal climate of Western Latvia. Significant differences in height and stem volume were observed among provenances. Growth superiority for certain local and Carpathian provenances was maintained over more than one-third of the rotation period. The best predictor of climate transfer functions was minimum temperature of the coldest month at the place of origin, explaining 28% variation in tree height. Populations from sites with more frost days and a colder mean annual temperature, minimum temperature, and lower annual heat-moisture index than the planting site were generally taller.


1985 ◽  
Vol 24 (1) ◽  
pp. 60-72 ◽  
Author(s):  
Linda E. Heusser ◽  
Joseph J. Morley

Using modern pollen and radiolarian distributions in sediments from the northwest Pacific and seas adjacent to Japan to interpret floral and faunal changes in core RC14-103 (44°02′N, 152°56′E), we recognize two major responses of the biota of eastern Hokkaido and the northwest Pacific to climatic changes since the last interglaciation. Relatively stable glacial environments (∼80,000–20,000 yr B.P.) were basically cold and wet (<4°C and ∼1000 mm mean annual temperature and precipitation, respectively) with boreal conijers and tundra/park-tundra on Hokkaido, and cool (<16°C) summer and cold (<1.0°C) winter surface temperatures offshore. Contrasting nonglacial environments (∼10,000–4000 yr B.P.) were warm and humid (>8°C and >1200 mm mean annual temperature and precipitation, respectively), supporting climax broadleaf deciduous forest with Quercus and Ulmus/Zelkova, with surface waters in the northwest Pacific characterized by warm (>1.5°C) winter and cold (10.4°–14.3°C) summer temperatures. Climatic evidence from RC14-103 shows a high degree of local and regional variation within the context of global climatic change. Correlative ocean and land records provide the detailed input necessary to assess local/regional responses to variations in other key elements (i.e., solar radiation, monsoonal variations) of the northeast Asian climate system.


1999 ◽  
Vol 29 (11) ◽  
pp. 1660-1668 ◽  
Author(s):  
Gerald E Rehfeldt ◽  
Nadja M Tchebakova ◽  
Leonard K Barnhardt

Growth and survival of eight populations of Larix sukaczewii Dylis and one of both Larix sibirica Ledeb. and Larix gmelinii (Rupr.) Rupr. were used to assess the effectiveness of climate transfer functions for predicting the 13-year performance of Eurasian provenances introduced to Alberta. Quadratic regression models showed that transfer distances for five climate variables (mean annual temperature, degree-days <0°C, mean temperature in the coldest month, ratio of the mean annual temperature to mean annual precipitation, and the summer-winter temperature range) were particularly effective in predicting height and survival. Optimal transfer distances did not differ significantly from zero, and as a result, the best growth and survival in Alberta should be obtained by matching the provenance climate to that of the planting site for the five variables. Verification of the climate transfer functions with independent data from Russian provenance tests were strongly supportive. The results demonstrate the effectiveness of climate transfer functions for describing the response of plant populations to the environment and thereby have practical implications in reforestation.


2019 ◽  
Vol 11 (3) ◽  
pp. 1129-1152
Author(s):  
Oliver Bothe ◽  
Sebastian Wagner ◽  
Eduardo Zorita

Abstract. Climate reconstructions are means to extract the signal from uncertain paleo-observations, so-called proxies. It is essential to evaluate these reconstructions to understand and quantify their uncertainties. Similarly, comparing climate simulations and proxies requires approaches to bridge the temporal and spatial differences between both and to address their specific uncertainties. One way to achieve these two goals is so-called pseudoproxies. These are surrogate proxy records within the virtual reality of a climate simulation. They in turn depend on an understanding of the uncertainties of the real proxies including the noise characteristics disturbing the original environmental signal. Common pseudoproxy approaches so far concentrate on data with high temporal resolution over the last approximately 2000 years. Here we provide a simple but flexible noise model for potentially low-resolution sedimentary climate proxies for temperature on millennial timescales, the code for calculating a set of pseudoproxies from a simulation, and one example of pseudoproxies. The noise model considers the influence of other environmental variables, a dependence on the climate state, a bias due to changing seasonality, modifications of the archive (for example bioturbation), potential sampling variability, and a measurement error. Model, code, and data allow us to develop new ways of comparing simulation data with proxies on long timescales. Code and data are available at https://doi.org/10.17605/OSF.IO/ZBEHX (Bothe et al., 2018).


2021 ◽  
Vol 13 (12) ◽  
Author(s):  
Sara E. Rhodes ◽  
Nicholas J. Conard

AbstractEnsuring comparability between results is a key goal of all paleoecological reconstructions. Quantitative estimates of meteorological variables, as opposed to relative qualitative descriptions, provide the opportunity to compare local paleoenvironmental records against global estimates and incrementally build regional paleoclimatic records. The Bioclimatic Method provides quantitative and qualitative estimates of past landscape composition and climate along with measures of statistical accuracy by applying linear discriminant functions analysis and transfer functions to faunal taxonomic abundance data. By applying this method to the rodent data from Geißenklösterle and Hohle Fels, two Paleolithic cave sites located in the Ach Valley of southwestern Germany, we classify the regional vegetation according to Walters’ zonobiome model. We also present new estimates of meteorological variables including mean annual temperature, mean annual precipitation, and vegetative activity period of the Ach Valley for the period spanning ~ 60,000 to 35,000 cal BP. The results suggest the Ach Valley contained a non-analogous landscape of arctic tundra and temperate deciduous woodland with occasional arid steppe expansion. Meteorological estimates suggest the climate was significantly colder during the Middle and Upper Paleolithic than today, with higher annual precipitation and dramatic temperature shifts between seasons. These results fit well with climatic reconstructions from Switzerland and the Netherlands based on a variety of proxies. They also provide further evidence of a localized climatic response within southwestern Germany to the stadial-interstadial shifts preceding the Heinrich 4 event. Finally, these results reinforce our previous claims that climatic volatility was not a driving force in the loss of Neanderthal groups throughout the Swabian Jura during OIS 3.


2019 ◽  
Author(s):  
Sean F. Cleator ◽  
Sandy P. Harrison ◽  
Nancy K, Nichols ◽  
Iain Colin Prentice ◽  
Ian Roulstone

Abstract. We present a new global reconstruction of seasonal climates at the Last Glacial Maximum (LGM, 21,000 yr BP) made using 3-D variational data assimilation with pollen-based site reconstructions of six climate variables and the ensemble average of the PMIP3/CMIP5 simulations as a prior. We assume that the correlation matrix of the errors of the prior both spatially and temporally is Gaussian, in order to produce a climate reconstruction that is smoothed both from month to month and from grid cell to grid cell. The pollen-based reconstructions include mean annual temperature (MAT), mean temperature of the coldest month (MTCO), mean temperature of the warmest month (MTWA), growing season warmth as measured by growing degree days above a baseline of 5 °C (GDD5), mean annual precipitation (MAP) and a moisture index (MI), which is the ratio of MAP to mean annual potential evapotranspiration. Different variables are reconstructed at different sites, but our approach both preserves seasonal relationships and allows a more complete set of seasonal climate variables to be derived at each location. We further account for the ecophysiological effects of low atmospheric carbon dioxide concentration on vegetation in making reconstructions of MAP and MI. This adjustment results in the reconstruction of wetter climates than might otherwise be inferred by the vegetation composition. Finally, by comparing the error contribution to the final reconstruction, we provide confidence intervals on these reconstructions and delimit geographical regions for which the palaeodata provide no information to constrain the climate reconstructions. The new reconstructions will provide a robust benchmark for evaluation of the PMIP4/CMIP6 entry-card LGM simulations.


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