scholarly journals A distributed time-lapse camera network to track vegetation phenology with high temporal detail and at varying scales

2021 ◽  
Vol 13 (7) ◽  
pp. 3593-3606
Author(s):  
Frans-Jan W. Parmentier ◽  
Lennart Nilsen ◽  
Hans Tømmervik ◽  
Elisabeth J. Cooper
Keyword(s):  
Time Series ◽  
Plant Communities ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Time Lapse ◽  
The Arctic ◽  
Vegetation Phenology ◽  
Additional Time ◽  
Svalbard Archipelago ◽  
Near Surface

Abstract. Near-surface remote sensing techniques are essential monitoring tools to provide spatial and temporal resolutions beyond the capabilities of orbital methods. This high level of detail is especially helpful to monitor specific plant communities and to accurately time the phenological stages of vegetation – which satellites can miss by days or weeks in frequently clouded areas such as the Arctic. In this paper, we describe a measurement network that is distributed across varying plant communities in the high Arctic valley of Adventdalen on the Svalbard archipelago with the aim of monitoring vegetation phenology. The network consists of 10 racks equipped with sensors that measure NDVI (normalized difference vegetation index), soil temperature, and moisture as well as time-lapse RGB cameras (i.e. phenocams). Three additional time-lapse cameras are placed on nearby mountains to provide an overview of the valley. We derived the vegetation index GCC (green chromatic channel) from these RGB photos, which has similar applications as NDVI but at a fraction of the cost of NDVI imaging sensors. To create a robust time series for GCC, each set of photos was adjusted for unwanted movement of the camera with a stabilizing algorithm that enhances the spatial precision of these measurements. This code is available at https://doi.org/10.5281/zenodo.4554937 (Parmentier, 2021) and can be applied to time series obtained with other time-lapse cameras. This paper presents an overview of the data collection and processing and an overview of the dataset that is available at https://doi.org/10.21343/kbpq-xb91 (Nilsen et al., 2021). In addition, we provide some examples of how these data can be used to monitor different vegetation communities in the landscape.

scholarly journals A distributed time-lapse camera network to track vegetation phenology with high temporal detail and at varying scales

2021 ◽  
Author(s):  
Frans-Jan W. Parmentier ◽  
Lennart Nilsen ◽  
Hans Tømmervik ◽  
Elisabeth J. Cooper
Keyword(s):  
Plant Communities ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Time Lapse ◽  
High Arctic ◽  
The Arctic ◽  
Vegetation Phenology ◽  
Additional Time ◽  
Svalbard Archipelago ◽  
Near Surface

Abstract. Near-surface remote sensing techniques are essential monitoring tools to provide spatial and temporal resolutions beyond the capabilities of orbital methods. This high level of detail is especially helpful to monitor specific plant communities and to accurately time the phenological stages of vegetation – which satellites can miss by days or weeks in frequently clouded areas such as the Arctic. In this paper, we describe a measurement network that is distributed across varying plant communities in the high Arctic valley of Adventdalen on the Svalbard archipelago, with the aim to monitor vegetation phenology. The network consists of ten racks equipped with sensors that measure NDVI (Normalized Difference Vegetation Index), soil temperature and moisture, as well as time-lapse RGB cameras. Three additional time-lapse cameras are placed on nearby mountain tops to provide an overview of the valley. The vegetation index GCC (Green Chromatic Channel) was derived from these RGB photos, which has similar applications as NDVI but at a fraction of the cost of NDVI imaging sensors. To create a robust timeseries for GCC, each set of photos was adjusted for unwanted movement of the camera with a stabilizing algorithm that enhances the spatial precision of these measurements. This code is available at https://doi.org/10.5281/zenodo.4554937 (Parmentier, 2021) and can be applied to time series obtained with other time-lapse cameras. This paper presents an overview of the data collection and processing, and an overview of the dataset which is available at https://doi.org/10.21343/kbpq-xb91 (Nilsen et al. 2021). In addition, we provide some examples of how this data can be used to monitoring different vegetation communities in the landscape.

scholarly journals Changes in Vegetation Phenology and Productivity in Alaska Over the Past Two Decades

2020 ◽  
Vol 12 (10) ◽  
pp. 1546 ◽  
Author(s):  
Christopher Potter ◽  
Olivia Alexander
Keyword(s):  
Time Series ◽  
Coastal Plain ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Regional Scale ◽  
Data Sets ◽  
Vegetation Phenology ◽  
Vegetation Growth ◽  
The Past ◽  
Moderate Resolution Imaging Spectroradiometer

Understanding trends in vegetation phenology and growing season productivity at a regional scale is important for global change studies, particularly as linkages can be made between climate shifts and the vegetation’s potential to sequester or release carbon into the atmosphere. Trends and geographic patterns of change in vegetation growth and phenology from the MODerate resolution Imaging Spectroradiometer (MODIS) satellite data sets were analyzed for the state of Alaska over the period 2000 to 2018. Phenology metrics derived from the MODIS Normalized Difference Vegetation Index (NDVI) time-series at 250 m resolution tracked changes in the total integrated greenness cover (TIN), maximum annual NDVI (MAXN), and start of the season timing (SOST) date over the past two decades. SOST trends showed significantly earlier seasonal vegetation greening (at more than one day per year) across the northeastern Brooks Range Mountains, on the Yukon-Kuskokwim coastal plain, and in the southern coastal areas of Alaska. TIN and MAXN have increased significantly across the western Arctic Coastal Plain and within the perimeters of most large wildfires of the Interior boreal region that burned since the year 2000, whereas TIN and MAXN have decreased notably in watersheds of Bristol Bay and in the Cook Inlet lowlands of southwestern Alaska, in the same regions where earlier-trending SOST was also detected. Mapping results from this MODIS time-series analysis have identified a new database of localized study locations across Alaska where vegetation phenology has recently shifted notably, and where land cover types and ecosystem processes could be changing rapidly.

scholarly journals Fire Recurrence and Normalized Difference Vegetation Index (NDVI) Dynamics in Brazilian Savanna

Fire ◽  
2018 ◽  
Vol 2 (1) ◽  
pp. 1 ◽  
Author(s):  
Níckolas Santana
Keyword(s):  
Remote Sensing ◽  
Time Series ◽  
Trend Analysis ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Management Policy ◽  
Brazilian Savanna ◽  
Vegetation Phenology ◽  
Modis Ndvi ◽  
Fire Recurrence

Fire is one of the main modeling agents of savanna ecosystems, affecting their distribution, physiognomy and species diversity. Changes in the natural fire regime on savannas cause disturbances in the structural characteristics of vegetation. Theses disturbances can be effectively monitored by time series of remote sensing data in different terrestrial ecosystems such as savannas. This study used trend analysis in NDVI (Normalized Difference Vegetation Index)–MODIS (Moderate Resolution Imaging Spectroradiometer) time series to evaluate the influence of different fire recurrences on vegetation phenology of the Brazilian savanna in the period from 2001 to 2016. The trend analysis indicated several factors responsible for changes in vegetation: (a) The absence of fire in savanna phytophysiognomies causes a constant increase in MODIS–NDVI, ranging from 0.001 to 0.002 per year, the moderate presence of fire in these areas does not cause significant changes, while the high recurrence results in decreases of MODIS–NDVI, ranging from −0.002 to −0.008 per year; (b) Forest areas showed a high decrease in NDVI, reaching up to −0.009 MODIS–NDVI per year, but not related to fire recurrence, indicating the high degradation of these phytophysiognomies; (c) Changes in vegetation are highly connected to the protection status of the area, such as areas of integral protection or sustainable use, and consequently their conservation status. Areas with greater vegetation conservation had more than 70% of positive changes in pixels with significant tendencies. Absence or presence of fire are the main agents of vegetation change in areas with lower anthropic influence. These results reinforce the need for a suitable fire management policy for the different types of Cerrado phytophysiognomies, in addition to highlighting the efficiency of remote sensing time series for evaluation of vegetation phenology.

scholarly journals The Use of Satellite Information (MODIS/Aqua) for Phenological and Classification Analysis of Plant Communities

Forests ◽  
2019 ◽  
Vol 10 (7) ◽  
pp. 561 ◽  
Author(s):  
Yulia Ivanova ◽  
Anton Kovalev ◽  
Oleg Yakubailik ◽  
Vlad Soukhovolsky
Keyword(s):  
Time Series ◽  
Discriminant Analysis ◽  
Linear Discriminant Analysis ◽  
Plant Communities ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Weather Conditions ◽  
Linear Discriminant ◽  
Canonical Correlations

Vegetation indices derived from remote sensing measurements are commonly used to describe and monitor vegetation. However, the same plant community can have a different NDVI (normalized difference vegetation index) depending on weather conditions, and this complicates classification of plant communities. The present study develops methods of classifying the types of plant communities based on long-term NDVI data (MODIS/Aqua). The number of variables is reduced by introducing two integrated parameters of the NDVI seasonal series, facilitating classification of the meadow, steppe, and forest plant communities in Siberia using linear discriminant analysis. The quality of classification conducted by using the markers characterizing NDVI dynamics during 2003–2017 varies between 94% (forest and steppe) and 68% (meadow and forest). In addition to determining phenological markers, canonical correlations have been calculated between the time series of the proposed markers and the time series of monthly average air temperatures. Based on this, each pixel with a definite plant composition can be characterized by only four values of canonical correlation coefficients over the entire period analyzed. By using canonical correlations between NDVI and weather parameters and employing linear discriminant analysis, one can obtain a highly accurate classification of the study plant communities.

scholarly journals Is Alaska’s Yukon–Kuskokwim Delta Greening or Browning? Resolving Mixed Signals of Tundra Vegetation Dynamics and Drivers in the Maritime Arctic

2021 ◽  
Vol 25 (1) ◽  
pp. 76-93
Author(s):  
Gerald V. Frost ◽  
Uma S. Bhatt ◽  
Matthew J. Macander ◽  
Amy S. Hendricks ◽  
M. Torre Jorgenson
Keyword(s):  
Time Series ◽  
Sea Ice ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Knowledge Exchange ◽  
Field Measurements ◽  
The Arctic ◽  
Sea Ice Extent ◽  
Moderate Resolution Imaging Spectroradiometer ◽  
Spring Sea Ice

Abstract Alaska’s Yukon–Kuskokwim Delta (YKD) is among the Arctic’s warmest, most biologically productive regions, but regional decline of the normalized difference vegetation index (NDVI) has been a striking feature of spaceborne Advanced High Resolution Radiometer (AVHRR) observations since 1982. This contrast with “greening” prevalent elsewhere in the low Arctic raises questions concerning climatic and biophysical drivers of tundra productivity along maritime–continental gradients. We compared NDVI time series from AVHRR, the Moderate Resolution Imaging Spectroradiometer (MODIS), and Landsat for 2000–19 and identified trend drivers with reference to sea ice and climate datasets, ecosystem and disturbance mapping, field measurements of vegetation, and knowledge exchange with YKD elders. All time series showed increasing maximum NDVI; however, whereas MODIS and Landsat trends were very similar, AVHRR-observed trends were weaker and had dissimilar spatial patterns. The AVHRR and MODIS records for time-integrated NDVI were dramatically different; AVHRR indicated weak declines, whereas MODIS indicated strong increases throughout the YKD. Disagreement largely arose from observations during shoulder seasons, when there is partial snow cover and very high cloud frequency. Nonetheless, both records shared strong correlations with spring sea ice extent and summer warmth. Multiple lines of evidence indicate that, despite frequent disturbances and high interannual variability in spring sea ice and summer warmth, tundra productivity is increasing on the YKD. Although climatic drivers of tundra productivity were similar to more continental parts of the Arctic, our intercomparison highlights sources of uncertainty in maritime areas like the YKD that currently, or soon will, challenge historical concepts of “what is Arctic.”

scholarly journals Assessing Forest Phenology: A Multi-Scale Comparison of Near-Surface (UAV, Spectral Reflectance Sensor, PhenoCam) and Satellite (MODIS, Sentinel-2) Remote Sensing

2021 ◽  
Vol 13 (8) ◽  
pp. 1597
Author(s):  
Shangharsha Thapa ◽  
Virginia E. Garcia Millan ◽  
Lars Eklundh
Keyword(s):  
Remote Sensing ◽  
Time Series ◽  
Spectral Reflectance ◽  
Vegetation Index ◽  
Temporal Dynamics ◽  
Vegetation Phenology ◽  
Change Analysis ◽  
Near Surface ◽  
Holistic Understanding ◽  
Sentinel 2

The monitoring of forest phenology based on observations from near-surface sensors such as Unmanned Aerial Vehicles (UAVs), PhenoCams, and Spectral Reflectance Sensors (SRS) over satellite sensors has recently gained significant attention in the field of remote sensing and vegetation phenology. However, exploring different aspects of forest phenology based on observations from these sensors and drawing comparatives from the time series of vegetation indices (VIs) still remains a challenge. Accordingly, this research explores the potential of near-surface sensors to track the temporal dynamics of phenology, cross-compare their results against satellite observations (MODIS, Sentinel-2), and validate satellite-derived phenology. A time series of Normalized Difference Vegetation Index (NDVI), Green Chromatic Coordinate (GCC), and Normalized Difference of Green & Red (VIgreen) indices were extracted from both near-surface and satellite sensor platforms. The regression analysis between time series of NDVI data from different sensors shows the high Pearson’s correlation coefficients (r > 0.75). Despite the good correlations, there was a remarkable offset and significant differences in slope during green-up and senescence periods. SRS showed the most distinctive NDVI profile and was different to other sensors. PhenoCamGCC tracked green-up of the canopy better than the other indices, with a well-defined start, end, and peak of the season, and was most closely correlated (r > 0.93) with the satellites, while SRS-based VIgreen accounted for the least correlation (r = 0.58) against Sentinel-2. Phenophase transition dates were estimated and validated against visual inspection of the PhenoCam data. The Start of Spring (SOS) and End of Spring (EOS) could be predicted with an accuracy of <3 days with GCC, while these metrics from VIgreen and NDVI resulted in a slightly higher bias of (3–10) days. The observed agreement between UAVNDVI vs. satelliteNDVI and PhenoCamGCC vs. satelliteGCC suggests that it is feasible to use PhenoCams and UAVs for satellite data validation and upscaling. Thus, a combination of these near-surface vegetation metrics is promising for a holistic understanding of vegetation phenology from canopy perspective and could serve as a good foundation for analysing the interoperability of different sensors for vegetation dynamics and change analysis.

scholarly journals MODIS and PROBA-V NDVI Products Differ when Compared with Observations from Phenological Towers at Four Tropical Dry Forests in the Americas

2019 ◽  
Vol 11 (19) ◽  
pp. 2316 ◽  
Author(s):  
J. Antonio Guzmán Q. ◽  
G. Arturo Sanchez-Azofeifa ◽  
Mário M. Espírito-Santo
Keyword(s):  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Southern Oscillation ◽  
Satellite Observations ◽  
Tropical Dry Forests ◽  
Vegetation Phenology ◽  
Wet Season ◽  
Dry Forests ◽  
Near Surface ◽  
Surface Observations

The Normalized Difference Vegetation Index (NDVI) is widely used to monitor vegetation phenology and productivity around the world. Over the last few decades, phenology monitoring at large scales has been possible due to the information and metrics derived from satellite sensors such as the Moderate Resolution Imaging Spectroradiometer (MODIS) or the Project for On-Board Autonomy–Vegetation (PROBA-V). However, due to their temporal and spatial resolution, adequate ground comparison is lacking. In this paper, we analyze how NDVI products from MODIS (Aqua and Terra) and PROBA-V predict vegetation phenology when compared with near-surface observations. We conduct this comparison at four tropical dry forests (TDFs) in the Americas. We undertake this study by comparing the following: (i) Dissimilarities of the standardized NDVI (NDVIS) using dynamic time warping, (ii) the differences of daily NDVIS between seasons and ENSO months using generalized linear models, and (iii) phenometrics derived from NDVI time series. Overall, our results suggest that NDVIS from satellite observations present DTW distances (dissimilarities) between 2.98 and 46.57 (18.91 ± 12.31) when compared with near-surface observations. Furthermore, NDVIS comparisons reveal that overall differences between satellite and near-surface observations are close to zero, but this tends to differ between seasons or when El Nino Southern Oscillation (ENSO) is present. Phenometrics comparisons show that metrics derived from satellite observations such as green-up, maturity, and start and end of the wet season strongly correlate with those from near-surface observations. In contrast, phenometrics that describe the day of the highest or lowest NDVI tend to be inconsistent with those from near-surface observations. All findings were observed independently of the NDVI source. Our results suggest that satellite-based NDVI products tend to be inconsistent descriptors of vegetation events on tropical deciduous forests in comparison with near-surface observations. These results reinforce the idea that satellite-based NDVI products should be used and interpreted with great caution and only in ecosystems with well-established knowledge of their vegetation phenology.

scholarly journals Assessment of Rangeland Degradation in New Mexico Using Time Series Segmentation and Residual Trend Analysis (TSS-RESTREND)

2021 ◽  
Vol 13 (9) ◽  
pp. 1618
Author(s):  
Melakeneh G. Gedefaw ◽  
Hatim M. E. Geli ◽  
Temesgen Alemayehu Abera
Keyword(s):  
Time Series ◽  
New Mexico ◽  
Trend Analysis ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Rangeland Management ◽  
Environmental Benefits ◽  
Drought Severity ◽  
Assessment Framework ◽  
Rangeland Degradation

Rangelands provide significant socioeconomic and environmental benefits to humans. However, climate variability and anthropogenic drivers can negatively impact rangeland productivity. The main goal of this study was to investigate structural and productivity changes in rangeland ecosystems in New Mexico (NM), in the southwestern United States of America during the 1984–2015 period. This goal was achieved by applying the time series segmented residual trend analysis (TSS-RESTREND) method, using datasets of the normalized difference vegetation index (NDVI) from the Global Inventory Modeling and Mapping Studies and precipitation from Parameter elevation Regressions on Independent Slopes Model (PRISM), and developing an assessment framework. The results indicated that about 17.6% and 12.8% of NM experienced a decrease and an increase in productivity, respectively. More than half of the state (55.6%) had insignificant change productivity, 10.8% was classified as indeterminant, and 3.2% was considered as agriculture. A decrease in productivity was observed in 2.2%, 4.5%, and 1.7% of NM’s grassland, shrubland, and ever green forest land cover classes, respectively. Significant decrease in productivity was observed in the northeastern and southeastern quadrants of NM while significant increase was observed in northwestern, southwestern, and a small portion of the southeastern quadrants. The timing of detected breakpoints coincided with some of NM’s drought events as indicated by the self-calibrated Palmar Drought Severity Index as their number increased since 2000s following a similar increase in drought severity. Some breakpoints were concurrent with some fire events. The combination of these two types of disturbances can partly explain the emergence of breakpoints with degradation in productivity. Using the breakpoint assessment framework developed in this study, the observed degradation based on the TSS-RESTREND showed only 55% agreement with the Rangeland Productivity Monitoring Service (RPMS) data. There was an agreement between the TSS-RESTREND and RPMS on the occurrence of significant degradation in productivity over the grasslands and shrublands within the Arizona/NM Tablelands and in the Chihuahua Desert ecoregions, respectively. This assessment of NM’s vegetation productivity is critical to support the decision-making process for rangeland management; address challenges related to the sustainability of forage supply and livestock production; conserve the biodiversity of rangelands ecosystems; and increase their resilience. Future analysis should consider the effects of rising temperatures and drought on rangeland degradation and productivity.

scholarly journals Sentinel-2 Based Temporal Detection of Agricultural Land Use Anomalies in Support of Common Agricultural Policy Monitoring

2018 ◽  
Vol 7 (10) ◽  
pp. 405 ◽  
Author(s):  
Urška Kanjir ◽  
Nataša Đurić ◽  
Tatjana Veljanovski
Keyword(s):  
Land Use ◽  
Time Series ◽  
Agricultural Policy ◽  
Common Agricultural Policy ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Agricultural Land ◽  
Agricultural Land Use ◽  
Land Use Control ◽  
Sentinel 2

The European Common Agricultural Policy (CAP) post-2020 timeframe reform will reshape the agriculture land use control procedures from a selected risk fields-based approach into an all-inclusive one. The reform fosters the use of Sentinel data with the objective of enabling greater transparency and comparability of CAP results in different Member States. In this paper, we investigate the analysis of a time series approach using Sentinel-2 images and the suitability of the BFAST (Breaks for Additive Season and Trend) Monitor method to detect changes that correspond to land use anomaly observations in the assessment of agricultural parcel management activities. We focus on identifying certain signs of ineligible (inconsistent) use in permanent meadows and crop fields in one growing season, and in particular those that can be associated with time-defined greenness (vegetation vigor). Depending on the requirements of the BFAST Monitor method and currently time-limited Sentinel-2 dataset for the reliable anomaly study, we introduce customized procedures to support and verify the BFAST Monitor anomaly detection results using the analysis of NDVI (Normalized Difference Vegetation Index) object-based temporal profiles and time-series standard deviation output, where geographical objects of interest are parcels of particular land use. The validation of land use candidate anomalies in view of land use ineligibilities was performed with the information on declared land annual use and field controls, as obtained in the framework of subsidy granting in Slovenia. The results confirm that the proposed combined approach proves efficient to deal with short time series and yields high accuracy rates in monitoring agricultural parcel greenness. As such it can already be introduced to help the process of agricultural land use control within certain CAP activities in the preparation and adaptation phase.

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