scholarly journals Agrophysiological Characterization of Maize (Zea mays) Plants from EV 8728 Seeds Irradiated to Gamma Radiation

2021 ◽  
pp. 82-88
Author(s):  
Ayolié Koutoua ◽  
Beugré Manéhonon Martine ◽  
Kanga Ahou Nadia ◽  
N’guessan Affoué Sylvie Rachelle ◽  
Kanga N’guessan Martial ◽  
...  
Keyword(s):  
Zea Mays ◽  
Gamma Radiation ◽  
Carotenoid Content ◽  
Herbaceous Plant ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Poaceae Family ◽  
Biochemical Level ◽  
Physiological And Biochemical

Maize (Zea mays L.) is a tropical annual herbaceous plant of the Poaceae family. It is a cereal cultivated under very varied conditions ranging from tropical to temperate climates. However, the accentuated climate change causes abiotic and biotic stresses reducing the development and the production of the plants. To improve these plants, it is important to understand the mechanisms involved in these stresses. Two doses of gamma irradiation (200 and 300 grays) were applied to the seeds of a variety (EV8728) of maize grown on an experimental plot at the Jean Lorougnon Guédé University (UJLoG). Thus, the morphological, physiological and biochemical behaviors of the plants were evaluated. The results showed that gamma radiation significantly reduces morphological parameters. However, this reduction is accentuated at 300 grays. At the physiological and biochemical level, the radiation reduced the chlorophyll a, b and total (t) contents and the carotenoid content. Additionally, the contents of proline, total protein and total sugar increased with 200 grays and decreased for 300 grays. However, the phenolic compounds content increases with the irradiation dose.

scholarly journals In Silico Prediction and Functional Characterization of Genes Related to Abiotic and Biotic Stresses in Chickpea (Cicer arietinum)

2018 ◽  
Vol 7 (1) ◽  
pp. 1-35
Author(s):  
Sukhdeep Kaur ◽  
Satendra Singh ◽  
Gitanjali Tandon ◽  
Sarika Jaiswal ◽  
Mir Asif Iquebal ◽  
...  
Keyword(s):  
Cicer Arietinum ◽  
In Silico ◽  
Functional Characterization ◽  
In Silico Prediction ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses

scholarly journals Genome-wide identification and expression profiling of glutathione S-transferase family under multiple abiotic and biotic stresses in Medicago truncatula L.

PLoS ONE ◽  
2021 ◽  
Vol 16 (2) ◽  
pp. e0247170
Author(s):  
Md. Soyib Hasan ◽  
Vishal Singh ◽  
Shiful Islam ◽  
Md. Sifatul Islam ◽  
Raju Ahsan ◽  
...  
Keyword(s):  
Medicago Truncatula ◽  
Expression Profiling ◽  
Developmental Stages ◽  
Functional Characterization ◽  
Drought Treatment ◽  
Specific Expression ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Genome Wide

Glutathione transferases (GSTs) constitute an ancient, ubiquitous, multi-functional antioxidant enzyme superfamily that has great importance on cellular detoxification against abiotic and biotic stresses as well as plant development and growth. The present study aimed to a comprehensive genome-wide identification and functional characterization of GST family in one of the economically important legume plants—Medicago truncatula. Here, we have identified a total of ninety-two putative MtGST genes that code for 120 proteins. All these members were classified into twelve classes based on their phylogenetic relationship and the presence of structural conserved domain/motif. Among them, 7 MtGST gene pairs were identified to have segmental duplication. Expression profiling of MtGST transcripts revealed their high level of organ/tissue-specific expression in most of the developmental stages and anatomical tissues. The transcripts of MtGSTU5, MtGSTU8, MtGSTU17, MtGSTU46, and MtGSTU47 showed significant up-regulation in response to various abiotic and biotic stresses. Moreover, transcripts of MtGSTU8, MtGSTU14, MtGSTU28, MtGSTU30, MtGSTU34, MtGSTU46 and MtGSTF8 were found to be highly upregulated in response to drought treatment for 24h and 48h. Among the highly stress-responsive MtGST members, MtGSTU17 showed strong affinity towards its conventional substrates reduced glutathione (GSH) and 1‐chloro‐2,4‐dinitrobenzene (CDNB) with the lowest binding energy of—5.7 kcal/mol and -6.5 kcal/mol, respectively. Furthermore, the substrate-binding site residues of MtGSTU17 were found to be highly conserved. These findings will facilitate the further functional and evolutionary characterization of GST genes in Medicago.

scholarly journals Genome-wide identification and biochemical characterization of calcineurin B-like calcium sensor proteins in Chlamydomonas reinhardtii

2020 ◽  
Vol 477 (10) ◽  
pp. 1879-1892
Author(s):  
Manoj Kumar ◽  
Komal Sharma ◽  
Akhilesh K. Yadav ◽  
Kajal Kanchan ◽  
Madhu Baghel ◽  
...  
Keyword(s):  
Chlamydomonas Reinhardtii ◽  
Biochemical Characterization ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Physiological Processes ◽  
Calcineurin B ◽  
Genome Wide ◽  
Dependent Protein ◽  
Sensor Proteins

Calcium (Ca2+) signaling is involved in the regulation of diverse biological functions through association with several proteins that enable them to respond to abiotic and biotic stresses. Though Ca2+-dependent signaling has been implicated in the regulation of several physiological processes in Chlamydomonas reinhardtii, Ca2+ sensor proteins are not characterized completely. C. reinhardtii has diverged from land plants lineage, but shares many common genes with animals, particularly those encoding proteins of the eukaryotic flagellum (or cilium) along with the basal body. Calcineurin, a Ca2+/calmodulin-dependent protein phosphatase, is an important effector of Ca2+ signaling in animals, while calcineurin B-like proteins (CBLs) play an important role in Ca2+ sensing and signaling in plants. The present study led to the identification of 13 novel CBL-like Ca2+ sensors in C. reinhardtii genome. One of the archetypical genes of the newly identified candidate, CrCBL-like1 was characterized. The ability of CrCBL-like1 protein to sense as well as bind Ca2+ were validated using two-step Ca2+-binding kinetics. The CrCBL-like1 protein localized around the plasma membrane, basal bodies and in flagella, and interacted with voltage-gated Ca2+ channel protein present abundantly in the flagella, indicating its involvement in the regulation of the Ca2+ concentration for flagellar movement. The CrCBL-like1 transcript and protein expression were also found to respond to abiotic stresses, suggesting its involvement in diverse physiological processes. Thus, the present study identifies novel Ca2+ sensors and sheds light on key players involved in Ca2+signaling in C. reinhardtii, which could further be extrapolated to understand the evolution of Ca2+ mediated signaling in other eukaryotes.

scholarly journals Identification and characterization of melon circular RNAs involved in powdery mildew responses through comparative transcriptome analysis

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11216
Author(s):  
Jianlei Sun ◽  
Yumei Dong ◽  
Chongqi Wang ◽  
Shouhua Xiao ◽  
Zigao Jiao ◽  
...  
Keyword(s):  
Powdery Mildew ◽  
Regulation Of Gene Expression ◽  
Circular Rnas ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Oxidation Reduction ◽  
Whole Transcriptome Sequencing ◽  
Intergenic Regions ◽  
Whole Transcriptome

Circular RNAs (circRNAs) are a class of newly discovered non-coding RNAs that are typically derived from a genome’s exonic, intronic, and intergenic regions. Recent studies of circRNAs in animals and plants have shown that circRNAs are vital in response to various abiotic and biotic stresses. Powdery mildew disease (PM) is a serious fungal disease threatening the melon industry. We performed whole transcriptome sequencing using the leaves of a PM-resistant (M1) and a PM-susceptible (B29) melon to identify circRNAs and determine their molecular functions. A total of 303 circRNAs were identified and >50% circRNAs were derived from exonic regions. Expression levels were significantly altered in 17 and 23 circRNAs after PM infections in B29 and M1, respectively. Melon circRNAs may participate in the response to biotic stimuli, oxidation reduction, metabolic processes, and the regulation of gene expression based on the functional annotation of circRNA parental genes. Furthermore, 27 circRNAs were predicted to be potential targets or ‘sponges’ for 18 microRNAs (miRNAs). Our results are the first to identify and characterize circRNA functions in melon and may contribute to a better understanding of the role and regulatory mechanisms of circRNAs in resisting PM.

scholarly journals Comparative Analysis and Evaluation of Handheld X-ray Fluorescence Spectrometry to Measure Silicon in Crop Plants

Proceedings ◽  
2020 ◽  
Vol 36 (1) ◽  
pp. 87
Author(s):  
Howell ◽  
Tan ◽  
Ulitzka ◽  
Quinnell
Keyword(s):  
Future Research ◽  
Abiotic And Biotic Stresses ◽  
X Ray ◽  
Global Food Security ◽  
Biotic Stresses ◽  
Analysis And Evaluation ◽  
Elemental Analyses ◽  
Poaceae Family ◽  
Si Content ◽  
Digestion Methods

Rice, wheat and corn are the three most consumed crop foods worldwide and, as such, are important when considering future global food security. All three species are members of the Poaceae family and are silica accumulators. For those plants that accumulate silica, silica fertilisation is considered to improve plant health and alleviate abiotic and biotic stresses thereby lessening reliance on pesticides. Measuring the silicon (Si) content in soils and plants is useful for identifying Si-poor systems; however, traditional chemical digestion methods to measure Si are hazardous and time consuming. Advances in the sensitivity of handheld X-ray fluorescence spectrometers (hh-xrf) create new opportunities for rapid plant elemental analyses. We present a Si analysis of using two handheld X-ray fluorescence devices (SciAps X-300 and the Niton XL3t GOLDD+) compared with a traditional NaOH-digestion method. The SciAps was found to be more accurate than the Niton and the average time taken to analyse Si using the SciAps was four seconds per sample. These data support the use of hh-xrf for rapid analysis of Si and indicate there are additional opportunities for future research to accurately quantify potassium and phosphorus using this technology.

scholarly journals Biochemical and histological characterization of tomato mutants

2012 ◽  
Vol 84 (2) ◽  
pp. 573-585 ◽  
Author(s):  
Carolina C. Monteiro ◽  
Milca B. Rolão ◽  
Mônica R. Franco ◽  
Leila P. Peters ◽  
Mariana C. Cia ◽  
...  
Keyword(s):  
Hydrogen Peroxide ◽  
Antioxidant Systems ◽  
Guaiacol Peroxidase ◽  
Intercellular Spaces ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Biochemical Responses ◽  
Mda Content ◽  
Anatomical Properties

Biochemical responses inherent to antioxidant systems as well morphological and anatomical properties of photomorphogenic, hormonal and developmental tomato mutants were investigated. Compared to the non-mutant Micro-Tom (MT), we observed that the malondialdehyde (MDA) content was enhanced in the diageotropica (dgt) and lutescent (l) mutants, whilst the highest levels of hydrogen peroxide (H2O2) were observed in high pigment 1 (hp1) and aurea (au) mutants. The analyses of antioxidant enzymes revealed that all mutants exhibited reduced catalase (CAT) activity when compared to MT. Guaiacol peroxidase (GPOX) was enhanced in both sitiens (sit) and notabilis (not) mutants, whereas in not mutant there was an increase in ascorbate peroxidase (APX). Based on PAGE analysis, the activities of glutathione reductase (GR) isoforms III, IV, V and VI were increased in l leaves, while the activity of superoxide dismutase (SOD) isoform III was reduced in leaves of sit, epi, Never ripe (Nr) and green flesh (gf) mutants. Microscopic analyses revealed that hp1 and au showed an increase in leaf intercellular spaces, whereas sit exhibited a decrease. The au and hp1 mutants also exhibited a decreased in the number of leaf trichomes. The characterization of these mutants is essential for their future use in plant development and ecophysiology studies, such as abiotic and biotic stresses on the oxidative metabolism.

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